Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 ACSL5-203ENST00000356116 3353 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
SHANK2Q9UPX8 RAB14-201ENST00000373840 4145 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
SHANK2Q9UPX8 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC8.48□□□□□ -1.05
SHANK2Q9UPX8 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC8.48□□□□□ -1.05
SHANK2Q9UPX8 AL360271.1-201ENST00000395679 510 ntBASIC8.48□□□□□ -1.05
SHANK2Q9UPX8 COX7B2-202ENST00000396533 617 ntAPPRIS P2 TSL 1 (best) BASIC8.48□□□□□ -1.05
SHANK2Q9UPX8 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC8.48□□□□□ -1.05
SHANK2Q9UPX8 RNU1-88P-201ENST00000459274 128 ntBASIC8.48□□□□□ -1.05
SHANK2Q9UPX8 AC090638.1-201ENST00000498296 909 ntBASIC8.48□□□□□ -1.05
SHANK2Q9UPX8 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC8.48□□□□□ -1.05
SHANK2Q9UPX8 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC8.48□□□□□ -1.05
SHANK2Q9UPX8 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC8.48□□□□□ -1.05
SHANK2Q9UPX8 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC8.48□□□□□ -1.05
SHANK2Q9UPX8 AC000068.2-201ENST00000608816 460 ntBASIC8.48□□□□□ -1.05
SHANK2Q9UPX8 MIR378J-201ENST00000611988 109 ntBASIC8.48□□□□□ -1.05
SHANK2Q9UPX8 GCNT3-201ENST00000396065 4933 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
SHANK2Q9UPX8 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC8.48□□□□□ -1.05
SHANK2Q9UPX8 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC8.48□□□□□ -1.05
SHANK2Q9UPX8 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
SHANK2Q9UPX8 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
SHANK2Q9UPX8 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
SHANK2Q9UPX8 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC8.47□□□□□ -1.05
SHANK2Q9UPX8 AC123769.2-201ENST00000624332 5984 ntBASIC8.47□□□□□ -1.05
SHANK2Q9UPX8 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC8.47□□□□□ -1.05
SHANK2Q9UPX8 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
SHANK2Q9UPX8 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
SHANK2Q9UPX8 RNA5SP335-201ENST00000363817 110 ntBASIC8.47□□□□□ -1.05
SHANK2Q9UPX8 MIR765-201ENST00000390226 114 ntBASIC8.47□□□□□ -1.05
SHANK2Q9UPX8 RNA5SP91-201ENST00000390902 119 ntBASIC8.47□□□□□ -1.05
SHANK2Q9UPX8 RPS17P17-201ENST00000419392 409 ntBASIC8.47□□□□□ -1.05
SHANK2Q9UPX8 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC8.47□□□□□ -1.05
SHANK2Q9UPX8 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC8.47□□□□□ -1.05
SHANK2Q9UPX8 AC005033.1-201ENST00000428904 813 ntBASIC8.47□□□□□ -1.05
SHANK2Q9UPX8 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC8.47□□□□□ -1.05
SHANK2Q9UPX8 RPS23P2-201ENST00000463671 415 ntBASIC8.47□□□□□ -1.05
SHANK2Q9UPX8 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC8.47□□□□□ -1.05
SHANK2Q9UPX8 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
SHANK2Q9UPX8 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC8.47□□□□□ -1.05
SHANK2Q9UPX8 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC8.47□□□□□ -1.05
SHANK2Q9UPX8 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
SHANK2Q9UPX8 AL034546.1-201ENST00000623740 3693 ntBASIC8.47□□□□□ -1.05
SHANK2Q9UPX8 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
SHANK2Q9UPX8 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC8.47□□□□□ -1.05
SHANK2Q9UPX8 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC8.47□□□□□ -1.05
SHANK2Q9UPX8 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC8.46□□□□□ -1.05
SHANK2Q9UPX8 NCKAP1-202ENST00000361354 20347 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
SHANK2Q9UPX8 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.05
SHANK2Q9UPX8 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC8.46□□□□□ -1.05
SHANK2Q9UPX8 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.05
SHANK2Q9UPX8 HEATR1-202ENST00000366581 6538 ntTSL 5 BASIC8.46□□□□□ -1.05
SHANK2Q9UPX8 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC8.46□□□□□ -1.05
SHANK2Q9UPX8 SOX9-AS1-202ENST00000414600 742 ntTSL 3 BASIC8.46□□□□□ -1.05
SHANK2Q9UPX8 RPS26P13-201ENST00000419030 330 ntBASIC8.46□□□□□ -1.05
SHANK2Q9UPX8 AC108075.1-201ENST00000424692 529 ntBASIC8.46□□□□□ -1.05
SHANK2Q9UPX8 AC245047.2-201ENST00000441060 530 ntBASIC8.46□□□□□ -1.05
SHANK2Q9UPX8 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
SHANK2Q9UPX8 RPS23P9-201ENST00000448848 438 ntBASIC8.46□□□□□ -1.05
SHANK2Q9UPX8 RPS29P22-201ENST00000472363 168 ntBASIC8.46□□□□□ -1.05
SHANK2Q9UPX8 RN7SL97P-201ENST00000486780 299 ntBASIC8.46□□□□□ -1.05
SHANK2Q9UPX8 AC007686.1-201ENST00000488511 463 ntBASIC8.46□□□□□ -1.05
SHANK2Q9UPX8 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
SHANK2Q9UPX8 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC8.46□□□□□ -1.05
SHANK2Q9UPX8 MAL2-207ENST00000522828 603 ntTSL 3 BASIC8.46□□□□□ -1.05
SHANK2Q9UPX8 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC8.46□□□□□ -1.05
SHANK2Q9UPX8 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC8.46□□□□□ -1.05
SHANK2Q9UPX8 NMNAT1P5-201ENST00000559657 841 ntBASIC8.46□□□□□ -1.05
SHANK2Q9UPX8 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC8.46□□□□□ -1.05
SHANK2Q9UPX8 CDC42EP3P1-201ENST00000601004 764 ntBASIC8.46□□□□□ -1.05
SHANK2Q9UPX8 AC087763.1-201ENST00000603391 286 ntBASIC8.46□□□□□ -1.05
SHANK2Q9UPX8 PACRG-210ENST00000611387 279 ntTSL 5 BASIC8.46□□□□□ -1.05
SHANK2Q9UPX8 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC8.46□□□□□ -1.05
SHANK2Q9UPX8 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
SHANK2Q9UPX8 AL359195.2-201ENST00000623657 4412 ntBASIC8.46□□□□□ -1.06
SHANK2Q9UPX8 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC8.46□□□□□ -1.06
SHANK2Q9UPX8 ZNF658B-201ENST00000602828 3408 ntBASIC8.46□□□□□ -1.06
SHANK2Q9UPX8 MLLT10-202ENST00000377059 4850 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
SHANK2Q9UPX8 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
SHANK2Q9UPX8 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
SHANK2Q9UPX8 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC8.46□□□□□ -1.06
SHANK2Q9UPX8 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
SHANK2Q9UPX8 CFLAR-201ENST00000309955 14672 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.06
SHANK2Q9UPX8 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
SHANK2Q9UPX8 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
SHANK2Q9UPX8 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
SHANK2Q9UPX8 AC092724.1-201ENST00000624623 3397 ntBASIC8.45□□□□□ -1.06
SHANK2Q9UPX8 GDA-209ENST00000545168 5362 ntTSL 2 BASIC8.45□□□□□ -1.06
SHANK2Q9UPX8 CDC123-202ENST00000378900 933 ntTSL 5 BASIC8.45□□□□□ -1.06
SHANK2Q9UPX8 RNU6ATAC18P-201ENST00000408413 101 ntBASIC8.45□□□□□ -1.06
SHANK2Q9UPX8 SLC35E1P1-201ENST00000419313 864 ntBASIC8.45□□□□□ -1.06
SHANK2Q9UPX8 AC072052.1-201ENST00000496556 306 ntBASIC8.45□□□□□ -1.06
SHANK2Q9UPX8 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC8.45□□□□□ -1.06
SHANK2Q9UPX8 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC8.45□□□□□ -1.06
SHANK2Q9UPX8 AC010245.2-201ENST00000606908 1167 ntBASIC8.45□□□□□ -1.06
SHANK2Q9UPX8 UBA3-213ENST00000631029 123 ntTSL 5 BASIC8.45□□□□□ -1.06
SHANK2Q9UPX8 AL161912.4-201ENST00000623889 2468 ntBASIC8.45□□□□□ -1.06
SHANK2Q9UPX8 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC8.45□□□□□ -1.06
SHANK2Q9UPX8 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC8.45□□□□□ -1.06
SHANK2Q9UPX8 AC137056.2-201ENST00000624055 1958 ntBASIC8.45□□□□□ -1.06
SHANK2Q9UPX8 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
SHANK2Q9UPX8 ETV1-210ENST00000430479 6740 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms