Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 RN7SKP286-201ENST00000410894 299 ntBASIC7.71□□□□□ -1.18
NPC1L1Q9UHC9 MARK2P12-201ENST00000420129 585 ntBASIC7.71□□□□□ -1.18
NPC1L1Q9UHC9 AL590399.2-201ENST00000427536 309 ntBASIC7.71□□□□□ -1.18
NPC1L1Q9UHC9 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC7.71□□□□□ -1.18
NPC1L1Q9UHC9 AL450023.1-201ENST00000450868 751 ntBASIC7.71□□□□□ -1.18
NPC1L1Q9UHC9 AC023141.9-201ENST00000458734 412 ntBASIC7.71□□□□□ -1.18
NPC1L1Q9UHC9 SNORD125-201ENST00000459538 96 ntBASIC7.71□□□□□ -1.18
NPC1L1Q9UHC9 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC7.71□□□□□ -1.18
NPC1L1Q9UHC9 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC7.71□□□□□ -1.18
NPC1L1Q9UHC9 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
NPC1L1Q9UHC9 AGGF1P7-201ENST00000562369 913 ntBASIC7.71□□□□□ -1.18
NPC1L1Q9UHC9 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC7.71□□□□□ -1.18
NPC1L1Q9UHC9 PPATP2-201ENST00000605635 508 ntBASIC7.71□□□□□ -1.18
NPC1L1Q9UHC9 AL138960.1-201ENST00000613838 513 ntBASIC7.71□□□□□ -1.18
NPC1L1Q9UHC9 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
NPC1L1Q9UHC9 EEF1A1P33-201ENST00000554413 1362 ntBASIC7.7□□□□□ -1.18
NPC1L1Q9UHC9 SRRM1P3-201ENST00000426911 2678 ntBASIC7.7□□□□□ -1.18
NPC1L1Q9UHC9 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC7.7□□□□□ -1.18
NPC1L1Q9UHC9 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
NPC1L1Q9UHC9 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC7.7□□□□□ -1.18
NPC1L1Q9UHC9 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC7.7□□□□□ -1.18
NPC1L1Q9UHC9 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC7.7□□□□□ -1.18
NPC1L1Q9UHC9 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
NPC1L1Q9UHC9 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
NPC1L1Q9UHC9 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
NPC1L1Q9UHC9 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.18
NPC1L1Q9UHC9 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
NPC1L1Q9UHC9 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
NPC1L1Q9UHC9 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC7.7□□□□□ -1.18
NPC1L1Q9UHC9 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
NPC1L1Q9UHC9 CDC123-202ENST00000378900 933 ntTSL 5 BASIC7.7□□□□□ -1.18
NPC1L1Q9UHC9 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC7.7□□□□□ -1.18
NPC1L1Q9UHC9 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
NPC1L1Q9UHC9 GAPDHP42-201ENST00000406848 981 ntBASIC7.7□□□□□ -1.18
NPC1L1Q9UHC9 GTF3AP1-201ENST00000416942 1004 ntBASIC7.7□□□□□ -1.18
NPC1L1Q9UHC9 AL596266.1-201ENST00000448132 400 ntBASIC7.7□□□□□ -1.18
NPC1L1Q9UHC9 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC7.7□□□□□ -1.18
NPC1L1Q9UHC9 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC7.7□□□□□ -1.18
NPC1L1Q9UHC9 AC087672.1-201ENST00000479876 766 ntBASIC7.7□□□□□ -1.18
NPC1L1Q9UHC9 SNORA43.3-201ENST00000517240 103 ntBASIC7.7□□□□□ -1.18
NPC1L1Q9UHC9 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC7.7□□□□□ -1.18
NPC1L1Q9UHC9 MYL6-213ENST00000549017 502 ntTSL 3 BASIC7.7□□□□□ -1.18
NPC1L1Q9UHC9 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC7.7□□□□□ -1.18
NPC1L1Q9UHC9 AC013244.1-201ENST00000604279 193 ntBASIC7.7□□□□□ -1.18
NPC1L1Q9UHC9 AC025574.2-201ENST00000615621 514 ntBASIC7.7□□□□□ -1.18
NPC1L1Q9UHC9 CGA-206ENST00000630630 832 ntTSL 2 BASIC7.7□□□□□ -1.18
NPC1L1Q9UHC9 HSPD1P7-201ENST00000447985 1686 ntBASIC7.69□□□□□ -1.18
NPC1L1Q9UHC9 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
NPC1L1Q9UHC9 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
NPC1L1Q9UHC9 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
NPC1L1Q9UHC9 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
NPC1L1Q9UHC9 YES1P1-201ENST00000418510 1628 ntBASIC7.69□□□□□ -1.18
NPC1L1Q9UHC9 ALB-220ENST00000621628 1606 ntTSL 5 BASIC7.69□□□□□ -1.18
NPC1L1Q9UHC9 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC7.69□□□□□ -1.18
NPC1L1Q9UHC9 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
NPC1L1Q9UHC9 COX7B2-202ENST00000396533 617 ntAPPRIS P2 TSL 1 (best) BASIC7.69□□□□□ -1.18
NPC1L1Q9UHC9 RN7SKP278-201ENST00000410504 342 ntBASIC7.69□□□□□ -1.18
NPC1L1Q9UHC9 METTL15P3-201ENST00000415522 1221 ntBASIC7.69□□□□□ -1.18
NPC1L1Q9UHC9 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC7.69□□□□□ -1.18
NPC1L1Q9UHC9 RN7SL72P-201ENST00000460697 269 ntBASIC7.69□□□□□ -1.18
NPC1L1Q9UHC9 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC7.69□□□□□ -1.18
NPC1L1Q9UHC9 RN7SL629P-201ENST00000489622 285 ntBASIC7.69□□□□□ -1.18
NPC1L1Q9UHC9 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC7.69□□□□□ -1.18
NPC1L1Q9UHC9 AC074087.1-201ENST00000512059 724 ntBASIC7.69□□□□□ -1.18
NPC1L1Q9UHC9 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC7.69□□□□□ -1.18
NPC1L1Q9UHC9 AP003080.1-202ENST00000526526 915 ntBASIC7.69□□□□□ -1.18
NPC1L1Q9UHC9 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
NPC1L1Q9UHC9 AC137627.1-201ENST00000545761 289 ntBASIC7.69□□□□□ -1.18
NPC1L1Q9UHC9 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC7.69□□□□□ -1.18
NPC1L1Q9UHC9 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC7.69□□□□□ -1.18
NPC1L1Q9UHC9 AP001357.1-201ENST00000586304 1053 ntBASIC7.69□□□□□ -1.18
NPC1L1Q9UHC9 AC007683.2-201ENST00000624681 714 ntBASIC7.69□□□□□ -1.18
NPC1L1Q9UHC9 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC7.69□□□□□ -1.18
NPC1L1Q9UHC9 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
NPC1L1Q9UHC9 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
NPC1L1Q9UHC9 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
NPC1L1Q9UHC9 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
NPC1L1Q9UHC9 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC7.68□□□□□ -1.18
NPC1L1Q9UHC9 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC7.68□□□□□ -1.18
NPC1L1Q9UHC9 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC7.68□□□□□ -1.18
NPC1L1Q9UHC9 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
NPC1L1Q9UHC9 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
NPC1L1Q9UHC9 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC7.68□□□□□ -1.18
NPC1L1Q9UHC9 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC7.68□□□□□ -1.18
NPC1L1Q9UHC9 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
NPC1L1Q9UHC9 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
NPC1L1Q9UHC9 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
NPC1L1Q9UHC9 AC007159.1-201ENST00000566529 4706 ntBASIC7.68□□□□□ -1.18
NPC1L1Q9UHC9 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC7.68□□□□□ -1.18
NPC1L1Q9UHC9 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC7.68□□□□□ -1.18
NPC1L1Q9UHC9 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
NPC1L1Q9UHC9 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
NPC1L1Q9UHC9 AC005042.1-201ENST00000393397 800 ntBASIC7.68□□□□□ -1.18
NPC1L1Q9UHC9 FMO7P-201ENST00000436045 768 ntBASIC7.68□□□□□ -1.18
NPC1L1Q9UHC9 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC7.68□□□□□ -1.18
NPC1L1Q9UHC9 AC073909.1-201ENST00000447112 999 ntBASIC7.68□□□□□ -1.18
NPC1L1Q9UHC9 ATP5LP5-201ENST00000483050 299 ntBASIC7.68□□□□□ -1.18
NPC1L1Q9UHC9 CSNK1A1P3-201ENST00000504105 330 ntBASIC7.68□□□□□ -1.18
NPC1L1Q9UHC9 RN7SKP253-201ENST00000516424 309 ntBASIC7.68□□□□□ -1.18
NPC1L1Q9UHC9 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC7.68□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 164.5 ms