Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 SCARNA18.1-201ENST00000516330 83 ntBASIC6.57□□□□□ -1.36
BLOC1S4Q9NUP1 RNA5SP438-201ENST00000516561 112 ntBASIC6.57□□□□□ -1.36
BLOC1S4Q9NUP1 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC6.57□□□□□ -1.36
BLOC1S4Q9NUP1 CETN3-206ENST00000522864 738 ntTSL 3 BASIC6.57□□□□□ -1.36
BLOC1S4Q9NUP1 IGLV3-30-201ENST00000524362 298 ntBASIC6.57□□□□□ -1.36
BLOC1S4Q9NUP1 AC027369.2-201ENST00000528030 440 ntBASIC6.57□□□□□ -1.36
BLOC1S4Q9NUP1 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC6.57□□□□□ -1.36
BLOC1S4Q9NUP1 AP001804.2-201ENST00000533932 910 ntBASIC6.57□□□□□ -1.36
BLOC1S4Q9NUP1 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC6.57□□□□□ -1.36
BLOC1S4Q9NUP1 AC006530.1-201ENST00000555980 571 ntBASIC6.57□□□□□ -1.36
BLOC1S4Q9NUP1 NPM1P42-201ENST00000560329 862 ntBASIC6.57□□□□□ -1.36
BLOC1S4Q9NUP1 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC6.57□□□□□ -1.36
BLOC1S4Q9NUP1 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC6.57□□□□□ -1.36
BLOC1S4Q9NUP1 MIR4776-2-201ENST00000580204 80 ntBASIC6.57□□□□□ -1.36
BLOC1S4Q9NUP1 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
BLOC1S4Q9NUP1 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
BLOC1S4Q9NUP1 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC6.57□□□□□ -1.36
BLOC1S4Q9NUP1 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC6.57□□□□□ -1.36
BLOC1S4Q9NUP1 AC100814.1-201ENST00000606963 623 ntBASIC6.57□□□□□ -1.36
BLOC1S4Q9NUP1 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
BLOC1S4Q9NUP1 MIR6793-201ENST00000612376 63 ntBASIC6.57□□□□□ -1.36
BLOC1S4Q9NUP1 AL445670.1-201ENST00000618889 801 ntBASIC6.57□□□□□ -1.36
BLOC1S4Q9NUP1 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC6.57□□□□□ -1.36
BLOC1S4Q9NUP1 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
BLOC1S4Q9NUP1 CNOT6LP1-201ENST00000559681 1462 ntBASIC6.57□□□□□ -1.36
BLOC1S4Q9NUP1 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
BLOC1S4Q9NUP1 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
BLOC1S4Q9NUP1 OR10AB1P-202ENST00000641219 1686 ntBASIC6.57□□□□□ -1.36
BLOC1S4Q9NUP1 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
BLOC1S4Q9NUP1 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
BLOC1S4Q9NUP1 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC6.57□□□□□ -1.36
BLOC1S4Q9NUP1 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
BLOC1S4Q9NUP1 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
BLOC1S4Q9NUP1 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
BLOC1S4Q9NUP1 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
BLOC1S4Q9NUP1 CDC27P2-201ENST00000425026 1922 ntBASIC6.56□□□□□ -1.36
BLOC1S4Q9NUP1 AC027088.4-201ENST00000611559 1947 ntBASIC6.56□□□□□ -1.36
BLOC1S4Q9NUP1 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
BLOC1S4Q9NUP1 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
BLOC1S4Q9NUP1 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC6.56□□□□□ -1.36
BLOC1S4Q9NUP1 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
BLOC1S4Q9NUP1 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
BLOC1S4Q9NUP1 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
BLOC1S4Q9NUP1 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.56□□□□□ -1.36
BLOC1S4Q9NUP1 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
BLOC1S4Q9NUP1 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
BLOC1S4Q9NUP1 RN7SKP275-201ENST00000364626 301 ntBASIC6.56□□□□□ -1.36
BLOC1S4Q9NUP1 RN7SKP78-201ENST00000364711 318 ntBASIC6.56□□□□□ -1.36
BLOC1S4Q9NUP1 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC6.56□□□□□ -1.36
BLOC1S4Q9NUP1 AC016739.1-201ENST00000405359 345 ntBASIC6.56□□□□□ -1.36
BLOC1S4Q9NUP1 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC6.56□□□□□ -1.36
BLOC1S4Q9NUP1 AC234781.4-201ENST00000419384 244 ntBASIC6.56□□□□□ -1.36
BLOC1S4Q9NUP1 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC6.56□□□□□ -1.36
BLOC1S4Q9NUP1 NDUFS5P5-201ENST00000437256 321 ntBASIC6.56□□□□□ -1.36
BLOC1S4Q9NUP1 AC096775.1-201ENST00000437724 448 ntBASIC6.56□□□□□ -1.36
BLOC1S4Q9NUP1 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC6.56□□□□□ -1.36
BLOC1S4Q9NUP1 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC6.56□□□□□ -1.36
BLOC1S4Q9NUP1 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC6.56□□□□□ -1.36
BLOC1S4Q9NUP1 AC019084.1-201ENST00000457337 432 ntBASIC6.56□□□□□ -1.36
BLOC1S4Q9NUP1 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
BLOC1S4Q9NUP1 AC025458.1-201ENST00000506046 166 ntBASIC6.56□□□□□ -1.36
BLOC1S4Q9NUP1 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC6.56□□□□□ -1.36
BLOC1S4Q9NUP1 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC6.56□□□□□ -1.36
BLOC1S4Q9NUP1 Y_RNA.667-201ENST00000516212 107 ntBASIC6.56□□□□□ -1.36
BLOC1S4Q9NUP1 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC6.56□□□□□ -1.36
BLOC1S4Q9NUP1 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC6.56□□□□□ -1.36
BLOC1S4Q9NUP1 AC078878.1-201ENST00000539832 958 ntBASIC6.56□□□□□ -1.36
BLOC1S4Q9NUP1 AC126615.2-201ENST00000553003 515 ntBASIC6.56□□□□□ -1.36
BLOC1S4Q9NUP1 AL356801.1-201ENST00000559320 294 ntBASIC6.56□□□□□ -1.36
BLOC1S4Q9NUP1 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
BLOC1S4Q9NUP1 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC6.56□□□□□ -1.36
BLOC1S4Q9NUP1 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC6.56□□□□□ -1.36
BLOC1S4Q9NUP1 AL499605.1-201ENST00000604628 403 ntBASIC6.56□□□□□ -1.36
BLOC1S4Q9NUP1 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
BLOC1S4Q9NUP1 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
BLOC1S4Q9NUP1 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
BLOC1S4Q9NUP1 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
BLOC1S4Q9NUP1 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
BLOC1S4Q9NUP1 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
BLOC1S4Q9NUP1 MFSD8-239ENST00000641590 2479 ntBASIC6.56□□□□□ -1.36
BLOC1S4Q9NUP1 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC6.56□□□□□ -1.36
BLOC1S4Q9NUP1 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
BLOC1S4Q9NUP1 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
BLOC1S4Q9NUP1 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
BLOC1S4Q9NUP1 CPS1-IT1-201ENST00000628368 2306 ntBASIC6.55□□□□□ -1.36
BLOC1S4Q9NUP1 FBXL21-201ENST00000297158 1305 ntBASIC6.55□□□□□ -1.36
BLOC1S4Q9NUP1 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
BLOC1S4Q9NUP1 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
BLOC1S4Q9NUP1 STK3-216ENST00000523601 3107 ntTSL 2 BASIC6.55□□□□□ -1.36
BLOC1S4Q9NUP1 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC6.55□□□□□ -1.36
BLOC1S4Q9NUP1 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
BLOC1S4Q9NUP1 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
BLOC1S4Q9NUP1 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
BLOC1S4Q9NUP1 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC6.55□□□□□ -1.36
BLOC1S4Q9NUP1 MFSD8-219ENST00000641228 2559 ntBASIC6.55□□□□□ -1.36
BLOC1S4Q9NUP1 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
BLOC1S4Q9NUP1 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.55□□□□□ -1.36
BLOC1S4Q9NUP1 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
BLOC1S4Q9NUP1 AL353625.1-202ENST00000366273 571 ntBASIC6.55□□□□□ -1.36
BLOC1S4Q9NUP1 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms