Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC6.95□□□□□ -1.3
SSU72Q9NP77 AC015969.1-201ENST00000366218 1416 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
SSU72Q9NP77 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
SSU72Q9NP77 MTHFD1P1-201ENST00000413059 2764 ntBASIC6.95□□□□□ -1.3
SSU72Q9NP77 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
SSU72Q9NP77 AC009120.2-204ENST00000621548 2032 ntBASIC6.95□□□□□ -1.3
SSU72Q9NP77 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
SSU72Q9NP77 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
SSU72Q9NP77 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC6.95□□□□□ -1.3
SSU72Q9NP77 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
SSU72Q9NP77 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
SSU72Q9NP77 AL672167.1-206ENST00000356293 943 ntBASIC6.95□□□□□ -1.3
SSU72Q9NP77 FCAR-204ENST00000359272 828 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
SSU72Q9NP77 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC6.95□□□□□ -1.3
SSU72Q9NP77 SNORA73B-201ENST00000363217 204 ntBASIC6.95□□□□□ -1.3
SSU72Q9NP77 SNORD65-201ENST00000391079 73 ntBASIC6.95□□□□□ -1.3
SSU72Q9NP77 ATP5F1P4-201ENST00000397288 746 ntBASIC6.95□□□□□ -1.3
SSU72Q9NP77 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
SSU72Q9NP77 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC6.95□□□□□ -1.3
SSU72Q9NP77 AP001043.1-203ENST00000415824 407 ntTSL 5 BASIC6.95□□□□□ -1.3
SSU72Q9NP77 EIF1P1-201ENST00000421436 341 ntBASIC6.95□□□□□ -1.3
SSU72Q9NP77 RPL23AP34-201ENST00000423483 410 ntBASIC6.95□□□□□ -1.3
SSU72Q9NP77 MTND4P28-201ENST00000426217 387 ntBASIC6.95□□□□□ -1.3
SSU72Q9NP77 AL596276.1-201ENST00000434465 418 ntBASIC6.95□□□□□ -1.3
SSU72Q9NP77 AL353653.1-202ENST00000435177 539 ntTSL 3 BASIC6.95□□□□□ -1.3
SSU72Q9NP77 NDUFS5P5-201ENST00000437256 321 ntBASIC6.95□□□□□ -1.3
SSU72Q9NP77 AL445465.1-204ENST00000440220 447 ntTSL 3 BASIC6.95□□□□□ -1.3
SSU72Q9NP77 RPSAP49-201ENST00000445182 886 ntBASIC6.95□□□□□ -1.3
SSU72Q9NP77 IGBP1P3-201ENST00000447449 1000 ntBASIC6.95□□□□□ -1.3
SSU72Q9NP77 RHEBP2-201ENST00000450289 600 ntBASIC6.95□□□□□ -1.3
SSU72Q9NP77 TPMTP4-201ENST00000450749 678 ntBASIC6.95□□□□□ -1.3
SSU72Q9NP77 MEF2AP1-201ENST00000454867 863 ntBASIC6.95□□□□□ -1.3
SSU72Q9NP77 SUMO2P2-201ENST00000456482 255 ntBASIC6.95□□□□□ -1.3
SSU72Q9NP77 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC6.95□□□□□ -1.3
SSU72Q9NP77 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC6.95□□□□□ -1.3
SSU72Q9NP77 AC010285.3-201ENST00000511668 676 ntBASIC6.95□□□□□ -1.3
SSU72Q9NP77 ANKRD55-205ENST00000513241 626 ntTSL 5 BASIC6.95□□□□□ -1.3
SSU72Q9NP77 DUXAP2-201ENST00000519198 589 ntBASIC6.95□□□□□ -1.3
SSU72Q9NP77 AC022639.1-204ENST00000520365 569 ntTSL 4 BASIC6.95□□□□□ -1.3
SSU72Q9NP77 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC6.95□□□□□ -1.3
SSU72Q9NP77 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC6.95□□□□□ -1.3
SSU72Q9NP77 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC6.95□□□□□ -1.3
SSU72Q9NP77 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC6.95□□□□□ -1.3
SSU72Q9NP77 AC156455.1-201ENST00000538790 851 ntTSL 2 BASIC6.95□□□□□ -1.3
SSU72Q9NP77 PPIAL4D-201ENST00000544708 495 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
SSU72Q9NP77 FLVCR2-204ENST00000553587 584 ntTSL 2 BASIC6.95□□□□□ -1.3
SSU72Q9NP77 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC6.95□□□□□ -1.3
SSU72Q9NP77 AL355076.3-201ENST00000555838 587 ntBASIC6.95□□□□□ -1.3
SSU72Q9NP77 AL109628.1-201ENST00000556877 366 ntBASIC6.95□□□□□ -1.3
SSU72Q9NP77 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC6.95□□□□□ -1.3
SSU72Q9NP77 AC012414.6-201ENST00000568241 401 ntBASIC6.95□□□□□ -1.3
SSU72Q9NP77 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
SSU72Q9NP77 USP2-AS1-205ENST00000578923 895 ntTSL 2 BASIC6.95□□□□□ -1.3
SSU72Q9NP77 OR4G1P-201ENST00000588632 938 ntBASIC6.95□□□□□ -1.3
SSU72Q9NP77 ELOCP28-201ENST00000590044 317 ntBASIC6.95□□□□□ -1.3
SSU72Q9NP77 SLC25A36P1-201ENST00000590111 465 ntBASIC6.95□□□□□ -1.3
SSU72Q9NP77 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC6.95□□□□□ -1.3
SSU72Q9NP77 AC108451.2-201ENST00000603875 538 ntBASIC6.95□□□□□ -1.3
SSU72Q9NP77 AC010678.1-201ENST00000614118 713 ntBASIC6.95□□□□□ -1.3
SSU72Q9NP77 ELMO2P1-202ENST00000614283 794 ntBASIC6.95□□□□□ -1.3
SSU72Q9NP77 AC013476.2-201ENST00000614456 459 ntBASIC6.95□□□□□ -1.3
SSU72Q9NP77 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC6.95□□□□□ -1.3
SSU72Q9NP77 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC6.95□□□□□ -1.3
SSU72Q9NP77 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
SSU72Q9NP77 SAMMSON-209ENST00000641222 1100 ntBASIC6.95□□□□□ -1.3
SSU72Q9NP77 C2orf83-204ENST00000641422 291 ntAPPRIS ALT2 BASIC6.95□□□□□ -1.3
SSU72Q9NP77 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC6.95□□□□□ -1.3
SSU72Q9NP77 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
SSU72Q9NP77 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
SSU72Q9NP77 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC6.95□□□□□ -1.3
SSU72Q9NP77 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
SSU72Q9NP77 AC004023.1-201ENST00000561473 1744 ntBASIC6.95□□□□□ -1.3
SSU72Q9NP77 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
SSU72Q9NP77 AC110597.1-201ENST00000562669 3176 ntBASIC6.95□□□□□ -1.3
SSU72Q9NP77 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
SSU72Q9NP77 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC6.95□□□□□ -1.3
SSU72Q9NP77 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
SSU72Q9NP77 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
SSU72Q9NP77 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
SSU72Q9NP77 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC6.95□□□□□ -1.3
SSU72Q9NP77 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
SSU72Q9NP77 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC6.95□□□□□ -1.3
SSU72Q9NP77 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
SSU72Q9NP77 AC012213.2-201ENST00000562917 4597 ntBASIC6.94□□□□□ -1.3
SSU72Q9NP77 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
SSU72Q9NP77 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
SSU72Q9NP77 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
SSU72Q9NP77 AC092979.1-201ENST00000488190 1414 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
SSU72Q9NP77 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SSU72Q9NP77 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
SSU72Q9NP77 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC6.94□□□□□ -1.3
SSU72Q9NP77 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
SSU72Q9NP77 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SSU72Q9NP77 MKI67P1-201ENST00000604297 1460 ntBASIC6.94□□□□□ -1.3
SSU72Q9NP77 OR2AT4-201ENST00000305159 1042 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
SSU72Q9NP77 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
SSU72Q9NP77 RNU4-21P-201ENST00000362802 126 ntBASIC6.94□□□□□ -1.3
SSU72Q9NP77 RNA5SP448-201ENST00000363151 111 ntBASIC6.94□□□□□ -1.3
SSU72Q9NP77 RNA5SP472-201ENST00000363868 119 ntBASIC6.94□□□□□ -1.3
SSU72Q9NP77 RNU6-353P-201ENST00000364266 108 ntBASIC6.94□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms