Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
USP29Q9HBJ7 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC6.31□□□□□ -1.4
USP29Q9HBJ7 MSL3P1-202ENST00000440028 1468 ntBASIC6.31□□□□□ -1.4
USP29Q9HBJ7 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
USP29Q9HBJ7 AJ239321.1-201ENST00000424255 564 ntBASIC6.31□□□□□ -1.4
USP29Q9HBJ7 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
USP29Q9HBJ7 AL606490.8-201ENST00000441624 319 ntBASIC6.31□□□□□ -1.4
USP29Q9HBJ7 CXCR2P1-202ENST00000443392 1074 ntBASIC6.31□□□□□ -1.4
USP29Q9HBJ7 AL512593.1-201ENST00000444758 779 ntBASIC6.31□□□□□ -1.4
USP29Q9HBJ7 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC6.31□□□□□ -1.4
USP29Q9HBJ7 RPL34P33-201ENST00000486062 334 ntBASIC6.31□□□□□ -1.4
USP29Q9HBJ7 PANCR-201ENST00000503456 493 ntTSL 5 BASIC6.31□□□□□ -1.4
USP29Q9HBJ7 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC6.31□□□□□ -1.4
USP29Q9HBJ7 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC6.31□□□□□ -1.4
USP29Q9HBJ7 RNU6-760P-201ENST00000516078 97 ntBASIC6.31□□□□□ -1.4
USP29Q9HBJ7 RNA5SP434-201ENST00000516647 121 ntBASIC6.31□□□□□ -1.4
USP29Q9HBJ7 Y_RNA.710-201ENST00000516975 110 ntBASIC6.31□□□□□ -1.4
USP29Q9HBJ7 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC6.31□□□□□ -1.4
USP29Q9HBJ7 AC009879.1-201ENST00000520029 839 ntBASIC6.31□□□□□ -1.4
USP29Q9HBJ7 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC6.31□□□□□ -1.4
USP29Q9HBJ7 FAU-203ENST00000525297 355 ntTSL 5 BASIC6.31□□□□□ -1.4
USP29Q9HBJ7 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC6.31□□□□□ -1.4
USP29Q9HBJ7 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC6.31□□□□□ -1.4
USP29Q9HBJ7 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC6.31□□□□□ -1.4
USP29Q9HBJ7 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC6.31□□□□□ -1.4
USP29Q9HBJ7 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC6.31□□□□□ -1.4
USP29Q9HBJ7 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.31□□□□□ -1.4
USP29Q9HBJ7 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC6.31□□□□□ -1.4
USP29Q9HBJ7 AC008555.7-201ENST00000605008 583 ntBASIC6.31□□□□□ -1.4
USP29Q9HBJ7 AC141002.1-201ENST00000607025 279 ntBASIC6.31□□□□□ -1.4
USP29Q9HBJ7 AC009452.1-201ENST00000640823 606 ntBASIC6.31□□□□□ -1.4
USP29Q9HBJ7 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
USP29Q9HBJ7 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
USP29Q9HBJ7 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
USP29Q9HBJ7 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC6.31□□□□□ -1.4
USP29Q9HBJ7 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
USP29Q9HBJ7 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
USP29Q9HBJ7 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
USP29Q9HBJ7 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
USP29Q9HBJ7 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
USP29Q9HBJ7 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.31□□□□□ -1.4
USP29Q9HBJ7 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.3□□□□□ -1.4
USP29Q9HBJ7 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC6.3□□□□□ -1.4
USP29Q9HBJ7 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC6.3□□□□□ -1.4
USP29Q9HBJ7 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.3□□□□□ -1.4
USP29Q9HBJ7 AC018717.1-201ENST00000457712 1505 ntBASIC6.3□□□□□ -1.4
USP29Q9HBJ7 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.3□□□□□ -1.4
USP29Q9HBJ7 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
USP29Q9HBJ7 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
USP29Q9HBJ7 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
USP29Q9HBJ7 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC6.3□□□□□ -1.4
USP29Q9HBJ7 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC6.3□□□□□ -1.4
USP29Q9HBJ7 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
USP29Q9HBJ7 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.3□□□□□ -1.4
USP29Q9HBJ7 AC140134.1-201ENST00000511830 3544 ntBASIC6.3□□□□□ -1.4
USP29Q9HBJ7 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
USP29Q9HBJ7 HSPD1P9-201ENST00000420325 1636 ntBASIC6.3□□□□□ -1.4
USP29Q9HBJ7 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
USP29Q9HBJ7 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC6.3□□□□□ -1.4
USP29Q9HBJ7 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC6.3□□□□□ -1.4
USP29Q9HBJ7 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
USP29Q9HBJ7 GNG5P2-201ENST00000372054 207 ntBASIC6.3□□□□□ -1.4
USP29Q9HBJ7 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC6.3□□□□□ -1.4
USP29Q9HBJ7 RNU6-152P-201ENST00000384037 107 ntBASIC6.3□□□□□ -1.4
USP29Q9HBJ7 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC6.3□□□□□ -1.4
USP29Q9HBJ7 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC6.3□□□□□ -1.4
USP29Q9HBJ7 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC6.3□□□□□ -1.4
USP29Q9HBJ7 AL731534.1-201ENST00000434711 269 ntBASIC6.3□□□□□ -1.4
USP29Q9HBJ7 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC6.3□□□□□ -1.4
USP29Q9HBJ7 MRPS33P4-201ENST00000434892 317 ntBASIC6.3□□□□□ -1.4
USP29Q9HBJ7 AMYP1-201ENST00000440059 1023 ntBASIC6.3□□□□□ -1.4
USP29Q9HBJ7 RPL6P30-201ENST00000443382 862 ntBASIC6.3□□□□□ -1.4
USP29Q9HBJ7 AC097463.1-201ENST00000447288 481 ntBASIC6.3□□□□□ -1.4
USP29Q9HBJ7 AC009963.4-201ENST00000448535 339 ntBASIC6.3□□□□□ -1.4
USP29Q9HBJ7 MORF4L1P4-201ENST00000450245 976 ntBASIC6.3□□□□□ -1.4
USP29Q9HBJ7 EIF2S2P4-201ENST00000461070 984 ntBASIC6.3□□□□□ -1.4
USP29Q9HBJ7 AC068228.1-201ENST00000461723 211 ntBASIC6.3□□□□□ -1.4
USP29Q9HBJ7 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC6.3□□□□□ -1.4
USP29Q9HBJ7 PFN2-209ENST00000481275 560 ntTSL 4 BASIC6.3□□□□□ -1.4
USP29Q9HBJ7 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC6.3□□□□□ -1.4
USP29Q9HBJ7 LSM3P4-201ENST00000502948 309 ntBASIC6.3□□□□□ -1.4
USP29Q9HBJ7 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC6.3□□□□□ -1.4
USP29Q9HBJ7 HMGN1P17-201ENST00000513734 295 ntBASIC6.3□□□□□ -1.4
USP29Q9HBJ7 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
USP29Q9HBJ7 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC6.3□□□□□ -1.4
USP29Q9HBJ7 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC6.3□□□□□ -1.4
USP29Q9HBJ7 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC6.3□□□□□ -1.4
USP29Q9HBJ7 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC6.3□□□□□ -1.4
USP29Q9HBJ7 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC6.3□□□□□ -1.4
USP29Q9HBJ7 AC096586.2-201ENST00000610260 441 ntBASIC6.3□□□□□ -1.4
USP29Q9HBJ7 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC6.3□□□□□ -1.4
USP29Q9HBJ7 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC6.3□□□□□ -1.4
USP29Q9HBJ7 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
USP29Q9HBJ7 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
USP29Q9HBJ7 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
USP29Q9HBJ7 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
USP29Q9HBJ7 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.3□□□□□ -1.4
USP29Q9HBJ7 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
USP29Q9HBJ7 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
USP29Q9HBJ7 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms