Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PKP4Q99569 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PKP4Q99569 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PKP4Q99569 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PKP4Q99569 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.85□□□□□ -1.47
PKP4Q99569 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PKP4Q99569 AC007159.1-201ENST00000566529 4706 ntBASIC5.85□□□□□ -1.47
PKP4Q99569 AC068870.3-201ENST00000625077 2536 ntBASIC5.85□□□□□ -1.47
PKP4Q99569 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.85□□□□□ -1.47
PKP4Q99569 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.84□□□□□ -1.47
PKP4Q99569 MTCO1P7-201ENST00000419523 1542 ntBASIC5.84□□□□□ -1.47
PKP4Q99569 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
PKP4Q99569 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PKP4Q99569 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
PKP4Q99569 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PKP4Q99569 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
PKP4Q99569 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PKP4Q99569 AC114876.1-201ENST00000490962 1366 ntBASIC5.84□□□□□ -1.47
PKP4Q99569 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.84□□□□□ -1.47
PKP4Q99569 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
PKP4Q99569 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
PKP4Q99569 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PKP4Q99569 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
PKP4Q99569 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
PKP4Q99569 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.84□□□□□ -1.47
PKP4Q99569 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
PKP4Q99569 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PKP4Q99569 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PKP4Q99569 Y_RNA.62-201ENST00000362840 99 ntBASIC5.84□□□□□ -1.47
PKP4Q99569 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.84□□□□□ -1.47
PKP4Q99569 SNORA70.9-201ENST00000384370 135 ntBASIC5.84□□□□□ -1.47
PKP4Q99569 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
PKP4Q99569 SNRPEP6-201ENST00000407465 277 ntBASIC5.84□□□□□ -1.47
PKP4Q99569 RNU2-18P-201ENST00000411224 162 ntBASIC5.84□□□□□ -1.47
PKP4Q99569 USP9YP19-201ENST00000412165 485 ntBASIC5.84□□□□□ -1.47
PKP4Q99569 RPL23AP18-201ENST00000416139 468 ntBASIC5.84□□□□□ -1.47
PKP4Q99569 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC5.84□□□□□ -1.47
PKP4Q99569 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.84□□□□□ -1.47
PKP4Q99569 NMD3P2-201ENST00000421815 761 ntBASIC5.84□□□□□ -1.47
PKP4Q99569 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC5.84□□□□□ -1.47
PKP4Q99569 MTATP6P11-201ENST00000428071 670 ntBASIC5.84□□□□□ -1.47
PKP4Q99569 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
PKP4Q99569 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC5.84□□□□□ -1.47
PKP4Q99569 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PKP4Q99569 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PKP4Q99569 RPSAP40-201ENST00000442343 891 ntBASIC5.84□□□□□ -1.47
PKP4Q99569 RPL6P30-201ENST00000443382 862 ntBASIC5.84□□□□□ -1.47
PKP4Q99569 CUBNP2-201ENST00000443534 1139 ntBASIC5.84□□□□□ -1.47
PKP4Q99569 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC5.84□□□□□ -1.47
PKP4Q99569 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC5.84□□□□□ -1.47
PKP4Q99569 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC5.84□□□□□ -1.47
PKP4Q99569 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC5.84□□□□□ -1.47
PKP4Q99569 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC5.84□□□□□ -1.47
PKP4Q99569 AC019227.1-201ENST00000526902 510 ntBASIC5.84□□□□□ -1.47
PKP4Q99569 AC024405.1-201ENST00000532521 1042 ntBASIC5.84□□□□□ -1.47
PKP4Q99569 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.84□□□□□ -1.47
PKP4Q99569 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC5.84□□□□□ -1.47
PKP4Q99569 MED21-206ENST00000546323 575 ntTSL 3 BASIC5.84□□□□□ -1.47
PKP4Q99569 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.84□□□□□ -1.47
PKP4Q99569 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.84□□□□□ -1.47
PKP4Q99569 AC026826.3-201ENST00000561747 158 ntBASIC5.84□□□□□ -1.47
PKP4Q99569 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC5.84□□□□□ -1.47
PKP4Q99569 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC5.84□□□□□ -1.47
PKP4Q99569 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC5.84□□□□□ -1.47
PKP4Q99569 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC5.84□□□□□ -1.47
PKP4Q99569 AP001437.1-201ENST00000608783 456 ntBASIC5.84□□□□□ -1.47
PKP4Q99569 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC5.84□□□□□ -1.47
PKP4Q99569 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC5.84□□□□□ -1.47
PKP4Q99569 AC016911.1-201ENST00000613297 452 ntBASIC5.84□□□□□ -1.47
PKP4Q99569 OR8G7P-201ENST00000616658 848 ntBASIC5.84□□□□□ -1.47
PKP4Q99569 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
PKP4Q99569 AC073592.6-201ENST00000624271 415 ntBASIC5.84□□□□□ -1.47
PKP4Q99569 AP001052.1-201ENST00000626421 99 ntBASIC5.84□□□□□ -1.47
PKP4Q99569 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.84□□□□□ -1.47
PKP4Q99569 AC097063.1-201ENST00000426714 1797 ntBASIC5.84□□□□□ -1.47
PKP4Q99569 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
PKP4Q99569 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.84□□□□□ -1.47
PKP4Q99569 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PKP4Q99569 AC022164.1-201ENST00000568767 2673 ntBASIC5.84□□□□□ -1.47
PKP4Q99569 GNL2P1-201ENST00000451274 2190 ntBASIC5.84□□□□□ -1.47
PKP4Q99569 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PKP4Q99569 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PKP4Q99569 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
PKP4Q99569 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
PKP4Q99569 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC5.84□□□□□ -1.48
PKP4Q99569 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.84□□□□□ -1.48
PKP4Q99569 AC123769.1-201ENST00000530992 3192 ntBASIC5.83□□□□□ -1.48
PKP4Q99569 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PKP4Q99569 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PKP4Q99569 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
PKP4Q99569 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
PKP4Q99569 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
PKP4Q99569 AC093225.1-201ENST00000506867 1408 ntBASIC5.83□□□□□ -1.48
PKP4Q99569 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.83□□□□□ -1.48
PKP4Q99569 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PKP4Q99569 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
PKP4Q99569 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.83□□□□□ -1.48
PKP4Q99569 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PKP4Q99569 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PKP4Q99569 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms