Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
SNED1Q8TER0 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
SNED1Q8TER0 ZNF658B-201ENST00000602828 3408 ntBASIC6.95□□□□□ -1.3
SNED1Q8TER0 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
SNED1Q8TER0 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
SNED1Q8TER0 AC009831.5-201ENST00000624000 3189 ntBASIC6.95□□□□□ -1.3
SNED1Q8TER0 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
SNED1Q8TER0 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
SNED1Q8TER0 AC097634.1-201ENST00000604491 2467 ntBASIC6.95□□□□□ -1.3
SNED1Q8TER0 Z82209.2-201ENST00000623410 2012 ntBASIC6.95□□□□□ -1.3
SNED1Q8TER0 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC6.94□□□□□ -1.3
SNED1Q8TER0 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
SNED1Q8TER0 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
SNED1Q8TER0 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SNED1Q8TER0 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC6.94□□□□□ -1.3
SNED1Q8TER0 EPGN-201ENST00000332112 847 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
SNED1Q8TER0 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC6.94□□□□□ -1.3
SNED1Q8TER0 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
SNED1Q8TER0 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
SNED1Q8TER0 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
SNED1Q8TER0 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC6.94□□□□□ -1.3
SNED1Q8TER0 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC6.94□□□□□ -1.3
SNED1Q8TER0 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC6.94□□□□□ -1.3
SNED1Q8TER0 AL603882.1-201ENST00000463059 681 ntBASIC6.94□□□□□ -1.3
SNED1Q8TER0 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC6.94□□□□□ -1.3
SNED1Q8TER0 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC6.94□□□□□ -1.3
SNED1Q8TER0 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC6.94□□□□□ -1.3
SNED1Q8TER0 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.94□□□□□ -1.3
SNED1Q8TER0 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC6.94□□□□□ -1.3
SNED1Q8TER0 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC6.94□□□□□ -1.3
SNED1Q8TER0 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC6.94□□□□□ -1.3
SNED1Q8TER0 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC6.94□□□□□ -1.3
SNED1Q8TER0 AP001784.1-201ENST00000624107 428 ntBASIC6.94□□□□□ -1.3
SNED1Q8TER0 AC073342.3-201ENST00000624211 193 ntBASIC6.94□□□□□ -1.3
SNED1Q8TER0 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SNED1Q8TER0 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
SNED1Q8TER0 AC012213.2-201ENST00000562917 4597 ntBASIC6.94□□□□□ -1.3
SNED1Q8TER0 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
SNED1Q8TER0 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC6.94□□□□□ -1.3
SNED1Q8TER0 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC6.94□□□□□ -1.3
SNED1Q8TER0 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC6.94□□□□□ -1.3
SNED1Q8TER0 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SNED1Q8TER0 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
SNED1Q8TER0 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SNED1Q8TER0 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.94□□□□□ -1.3
SNED1Q8TER0 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.93□□□□□ -1.3
SNED1Q8TER0 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.93□□□□□ -1.3
SNED1Q8TER0 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.93□□□□□ -1.3
SNED1Q8TER0 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC6.93□□□□□ -1.3
SNED1Q8TER0 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
SNED1Q8TER0 COX7B2-202ENST00000396533 617 ntAPPRIS P2 TSL 1 (best) BASIC6.93□□□□□ -1.3
SNED1Q8TER0 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC6.93□□□□□ -1.3
SNED1Q8TER0 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC6.93□□□□□ -1.3
SNED1Q8TER0 AC009784.1-201ENST00000426484 460 ntBASIC6.93□□□□□ -1.3
SNED1Q8TER0 RPL7P39-201ENST00000481157 744 ntBASIC6.93□□□□□ -1.3
SNED1Q8TER0 AC105384.2-201ENST00000508433 640 ntBASIC6.93□□□□□ -1.3
SNED1Q8TER0 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC6.93□□□□□ -1.3
SNED1Q8TER0 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC6.93□□□□□ -1.3
SNED1Q8TER0 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC6.93□□□□□ -1.3
SNED1Q8TER0 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC6.93□□□□□ -1.3
SNED1Q8TER0 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC6.93□□□□□ -1.3
SNED1Q8TER0 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC6.93□□□□□ -1.3
SNED1Q8TER0 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC6.93□□□□□ -1.3
SNED1Q8TER0 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC6.93□□□□□ -1.3
SNED1Q8TER0 LINC01739-205ENST00000641890 573 ntBASIC6.93□□□□□ -1.3
SNED1Q8TER0 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.93□□□□□ -1.3
SNED1Q8TER0 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
SNED1Q8TER0 SAMD3-204ENST00000439090 2093 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
SNED1Q8TER0 SLC7A14-201ENST00000231706 10103 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
SNED1Q8TER0 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
SNED1Q8TER0 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC6.93□□□□□ -1.3
SNED1Q8TER0 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC6.93□□□□□ -1.3
SNED1Q8TER0 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
SNED1Q8TER0 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
SNED1Q8TER0 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
SNED1Q8TER0 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
SNED1Q8TER0 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
SNED1Q8TER0 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC6.93□□□□□ -1.3
SNED1Q8TER0 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC6.93□□□□□ -1.3
SNED1Q8TER0 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
SNED1Q8TER0 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC6.93□□□□□ -1.3
SNED1Q8TER0 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
SNED1Q8TER0 CAST-202ENST00000325674 3356 ntTSL 5 BASIC6.93□□□□□ -1.3
SNED1Q8TER0 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
SNED1Q8TER0 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
SNED1Q8TER0 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC6.93□□□□□ -1.3
SNED1Q8TER0 LDHAP2-201ENST00000437325 985 ntBASIC6.93□□□□□ -1.3
SNED1Q8TER0 AL645937.3-201ENST00000453647 936 ntBASIC6.93□□□□□ -1.3
SNED1Q8TER0 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC6.93□□□□□ -1.3
SNED1Q8TER0 IGLV2-34-201ENST00000490007 283 ntBASIC6.93□□□□□ -1.3
SNED1Q8TER0 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC6.93□□□□□ -1.3
SNED1Q8TER0 BLZF2P-201ENST00000553776 1130 ntBASIC6.93□□□□□ -1.3
SNED1Q8TER0 MIR6820-201ENST00000611508 62 ntBASIC6.93□□□□□ -1.3
SNED1Q8TER0 KLHL5-203ENST00000381930 3288 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
SNED1Q8TER0 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
SNED1Q8TER0 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC6.92□□□□□ -1.3
SNED1Q8TER0 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
SNED1Q8TER0 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
SNED1Q8TER0 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
SNED1Q8TER0 ZBTB34-202ENST00000373452 6528 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms