Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
LMO3Q8TAP4 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.15□□□□□ -1.43
LMO3Q8TAP4 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.43
LMO3Q8TAP4 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
LMO3Q8TAP4 GTF2IP4-201ENST00000453092 2054 ntBASIC6.14□□□□□ -1.43
LMO3Q8TAP4 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
LMO3Q8TAP4 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
LMO3Q8TAP4 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
LMO3Q8TAP4 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6.14□□□□□ -1.43
LMO3Q8TAP4 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
LMO3Q8TAP4 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
LMO3Q8TAP4 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.14□□□□□ -1.43
LMO3Q8TAP4 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
LMO3Q8TAP4 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC6.14□□□□□ -1.43
LMO3Q8TAP4 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
LMO3Q8TAP4 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
LMO3Q8TAP4 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC6.14□□□□□ -1.43
LMO3Q8TAP4 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC6.14□□□□□ -1.43
LMO3Q8TAP4 RNA5SP30-201ENST00000365552 115 ntBASIC6.14□□□□□ -1.43
LMO3Q8TAP4 PPCS-201ENST00000372556 984 ntTSL 2 BASIC6.14□□□□□ -1.43
LMO3Q8TAP4 AC005042.1-201ENST00000393397 800 ntBASIC6.14□□□□□ -1.43
LMO3Q8TAP4 AC127526.2-201ENST00000426436 775 ntBASIC6.14□□□□□ -1.43
LMO3Q8TAP4 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC6.14□□□□□ -1.43
LMO3Q8TAP4 OR6C71P-201ENST00000432580 913 ntBASIC6.14□□□□□ -1.43
LMO3Q8TAP4 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC6.14□□□□□ -1.43
LMO3Q8TAP4 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC6.14□□□□□ -1.43
LMO3Q8TAP4 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC6.14□□□□□ -1.43
LMO3Q8TAP4 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC6.14□□□□□ -1.43
LMO3Q8TAP4 RPS23P2-201ENST00000463671 415 ntBASIC6.14□□□□□ -1.43
LMO3Q8TAP4 OR7E157P-201ENST00000494376 911 ntBASIC6.14□□□□□ -1.43
LMO3Q8TAP4 RPS17P5-201ENST00000498293 408 ntBASIC6.14□□□□□ -1.43
LMO3Q8TAP4 NENFP3-201ENST00000503735 313 ntBASIC6.14□□□□□ -1.43
LMO3Q8TAP4 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC6.14□□□□□ -1.43
LMO3Q8TAP4 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC6.14□□□□□ -1.43
LMO3Q8TAP4 AC008676.3-201ENST00000521237 435 ntBASIC6.14□□□□□ -1.43
LMO3Q8TAP4 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC6.14□□□□□ -1.43
LMO3Q8TAP4 AP003168.1-201ENST00000530091 307 ntBASIC6.14□□□□□ -1.43
LMO3Q8TAP4 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC6.14□□□□□ -1.43
LMO3Q8TAP4 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC6.14□□□□□ -1.43
LMO3Q8TAP4 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC6.14□□□□□ -1.43
LMO3Q8TAP4 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC6.14□□□□□ -1.43
LMO3Q8TAP4 CASC22-201ENST00000569713 386 ntTSL 5 BASIC6.14□□□□□ -1.43
LMO3Q8TAP4 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC6.14□□□□□ -1.43
LMO3Q8TAP4 FAM27E4-201ENST00000605259 342 ntBASIC6.14□□□□□ -1.43
LMO3Q8TAP4 MIR6071-201ENST00000616741 78 ntBASIC6.14□□□□□ -1.43
LMO3Q8TAP4 AP005431.1-201ENST00000618479 319 ntBASIC6.14□□□□□ -1.43
LMO3Q8TAP4 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC6.14□□□□□ -1.43
LMO3Q8TAP4 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
LMO3Q8TAP4 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC6.14□□□□□ -1.43
LMO3Q8TAP4 AC027279.4-201ENST00000624371 2072 ntBASIC6.14□□□□□ -1.43
LMO3Q8TAP4 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
LMO3Q8TAP4 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
LMO3Q8TAP4 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC6.14□□□□□ -1.43
LMO3Q8TAP4 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
LMO3Q8TAP4 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC6.14□□□□□ -1.43
LMO3Q8TAP4 UGT2B24P-201ENST00000514441 1597 ntBASIC6.14□□□□□ -1.43
LMO3Q8TAP4 AC084782.1-201ENST00000564401 2465 ntBASIC6.14□□□□□ -1.43
LMO3Q8TAP4 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
LMO3Q8TAP4 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
LMO3Q8TAP4 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC6.13□□□□□ -1.43
LMO3Q8TAP4 VN1R12P-201ENST00000403778 876 ntBASIC6.13□□□□□ -1.43
LMO3Q8TAP4 ZNF736P10Y-201ENST00000403990 1110 ntBASIC6.13□□□□□ -1.43
LMO3Q8TAP4 LSM5-203ENST00000409782 649 ntTSL 5 BASIC6.13□□□□□ -1.43
LMO3Q8TAP4 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC6.13□□□□□ -1.43
LMO3Q8TAP4 RANP7-201ENST00000418085 644 ntBASIC6.13□□□□□ -1.43
LMO3Q8TAP4 AK4P4-201ENST00000419465 646 ntBASIC6.13□□□□□ -1.43
LMO3Q8TAP4 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC6.13□□□□□ -1.43
LMO3Q8TAP4 AC115283.1-201ENST00000427353 400 ntBASIC6.13□□□□□ -1.43
LMO3Q8TAP4 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC6.13□□□□□ -1.43
LMO3Q8TAP4 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC6.13□□□□□ -1.43
LMO3Q8TAP4 AP006222.1-205ENST00000450734 457 ntBASIC6.13□□□□□ -1.43
LMO3Q8TAP4 AC011476.1-201ENST00000466725 307 ntBASIC6.13□□□□□ -1.43
LMO3Q8TAP4 RN7SKP253-201ENST00000516424 309 ntBASIC6.13□□□□□ -1.43
LMO3Q8TAP4 RNU6-551P-201ENST00000516661 103 ntBASIC6.13□□□□□ -1.43
LMO3Q8TAP4 RNA5SP271-201ENST00000516700 88 ntBASIC6.13□□□□□ -1.43
LMO3Q8TAP4 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC6.13□□□□□ -1.43
LMO3Q8TAP4 AC084033.1-201ENST00000550830 633 ntBASIC6.13□□□□□ -1.43
LMO3Q8TAP4 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC6.13□□□□□ -1.43
LMO3Q8TAP4 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC6.13□□□□□ -1.43
LMO3Q8TAP4 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
LMO3Q8TAP4 AC067773.1-201ENST00000603284 1094 ntBASIC6.13□□□□□ -1.43
LMO3Q8TAP4 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC6.13□□□□□ -1.43
LMO3Q8TAP4 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC6.13□□□□□ -1.43
LMO3Q8TAP4 AC079776.5-201ENST00000641920 211 ntBASIC6.13□□□□□ -1.43
LMO3Q8TAP4 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC6.13□□□□□ -1.43
LMO3Q8TAP4 HSPD1P7-201ENST00000447985 1686 ntBASIC6.13□□□□□ -1.43
LMO3Q8TAP4 MR1-209ENST00000617803 7584 ntTSL 5 BASIC6.13□□□□□ -1.43
LMO3Q8TAP4 AC025470.1-201ENST00000510053 2032 ntBASIC6.13□□□□□ -1.43
LMO3Q8TAP4 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
LMO3Q8TAP4 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
LMO3Q8TAP4 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC6.13□□□□□ -1.43
LMO3Q8TAP4 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC6.12□□□□□ -1.43
LMO3Q8TAP4 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC6.12□□□□□ -1.43
LMO3Q8TAP4 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
LMO3Q8TAP4 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
LMO3Q8TAP4 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
LMO3Q8TAP4 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
LMO3Q8TAP4 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
LMO3Q8TAP4 GAPDHP24-201ENST00000328713 983 ntBASIC6.12□□□□□ -1.43
LMO3Q8TAP4 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms