Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
C9orf40Q8IXQ3 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
C9orf40Q8IXQ3 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.39□□□□□ -1.55
C9orf40Q8IXQ3 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
C9orf40Q8IXQ3 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.39□□□□□ -1.55
C9orf40Q8IXQ3 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.38□□□□□ -1.55
C9orf40Q8IXQ3 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC5.38□□□□□ -1.55
C9orf40Q8IXQ3 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
C9orf40Q8IXQ3 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
C9orf40Q8IXQ3 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC5.38□□□□□ -1.55
C9orf40Q8IXQ3 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
C9orf40Q8IXQ3 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
C9orf40Q8IXQ3 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
C9orf40Q8IXQ3 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
C9orf40Q8IXQ3 MIR375-201ENST00000362103 64 ntBASIC5.38□□□□□ -1.55
C9orf40Q8IXQ3 RN7SKP186-201ENST00000365371 303 ntBASIC5.38□□□□□ -1.55
C9orf40Q8IXQ3 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
C9orf40Q8IXQ3 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
C9orf40Q8IXQ3 RNA5SP284-201ENST00000384547 118 ntBASIC5.38□□□□□ -1.55
C9orf40Q8IXQ3 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
C9orf40Q8IXQ3 RPS3AP2-201ENST00000407190 754 ntBASIC5.38□□□□□ -1.55
C9orf40Q8IXQ3 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.38□□□□□ -1.55
C9orf40Q8IXQ3 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.38□□□□□ -1.55
C9orf40Q8IXQ3 USP24P1-201ENST00000433802 779 ntBASIC5.38□□□□□ -1.55
C9orf40Q8IXQ3 RPL23AP19-201ENST00000436229 369 ntBASIC5.38□□□□□ -1.55
C9orf40Q8IXQ3 GAPDHP48-201ENST00000436626 961 ntBASIC5.38□□□□□ -1.55
C9orf40Q8IXQ3 AC096775.1-201ENST00000437724 448 ntBASIC5.38□□□□□ -1.55
C9orf40Q8IXQ3 AL136455.1-201ENST00000441083 1240 ntBASIC5.38□□□□□ -1.55
C9orf40Q8IXQ3 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.38□□□□□ -1.55
C9orf40Q8IXQ3 RNU1-88P-201ENST00000459274 128 ntBASIC5.38□□□□□ -1.55
C9orf40Q8IXQ3 AC007998.1-201ENST00000474156 672 ntBASIC5.38□□□□□ -1.55
C9orf40Q8IXQ3 RPS17P15-201ENST00000475609 349 ntBASIC5.38□□□□□ -1.55
C9orf40Q8IXQ3 AC006539.1-201ENST00000481419 501 ntBASIC5.38□□□□□ -1.55
C9orf40Q8IXQ3 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.38□□□□□ -1.55
C9orf40Q8IXQ3 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
C9orf40Q8IXQ3 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.38□□□□□ -1.55
C9orf40Q8IXQ3 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.38□□□□□ -1.55
C9orf40Q8IXQ3 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.38□□□□□ -1.55
C9orf40Q8IXQ3 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC5.38□□□□□ -1.55
C9orf40Q8IXQ3 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.38□□□□□ -1.55
C9orf40Q8IXQ3 AC008521.2-201ENST00000591021 259 ntBASIC5.38□□□□□ -1.55
C9orf40Q8IXQ3 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
C9orf40Q8IXQ3 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
C9orf40Q8IXQ3 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.38□□□□□ -1.55
C9orf40Q8IXQ3 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
C9orf40Q8IXQ3 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
C9orf40Q8IXQ3 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC5.38□□□□□ -1.55
C9orf40Q8IXQ3 AC106872.5-201ENST00000508856 1416 ntBASIC5.38□□□□□ -1.55
C9orf40Q8IXQ3 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.38□□□□□ -1.55
C9orf40Q8IXQ3 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
C9orf40Q8IXQ3 AC025470.1-201ENST00000510053 2032 ntBASIC5.38□□□□□ -1.55
C9orf40Q8IXQ3 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
C9orf40Q8IXQ3 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
C9orf40Q8IXQ3 AP004607.3-201ENST00000530354 3915 ntBASIC5.38□□□□□ -1.55
C9orf40Q8IXQ3 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
C9orf40Q8IXQ3 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
C9orf40Q8IXQ3 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC5.38□□□□□ -1.55
C9orf40Q8IXQ3 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
C9orf40Q8IXQ3 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.37□□□□□ -1.55
C9orf40Q8IXQ3 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.37□□□□□ -1.55
C9orf40Q8IXQ3 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
C9orf40Q8IXQ3 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
C9orf40Q8IXQ3 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
C9orf40Q8IXQ3 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
C9orf40Q8IXQ3 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC5.37□□□□□ -1.55
C9orf40Q8IXQ3 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
C9orf40Q8IXQ3 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
C9orf40Q8IXQ3 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
C9orf40Q8IXQ3 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
C9orf40Q8IXQ3 RN7SKP78-201ENST00000364711 318 ntBASIC5.37□□□□□ -1.55
C9orf40Q8IXQ3 RN7SKP292-201ENST00000365522 317 ntBASIC5.37□□□□□ -1.55
C9orf40Q8IXQ3 GNG5P2-201ENST00000372054 207 ntBASIC5.37□□□□□ -1.55
C9orf40Q8IXQ3 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC5.37□□□□□ -1.55
C9orf40Q8IXQ3 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC5.37□□□□□ -1.55
C9orf40Q8IXQ3 MTND6P12-201ENST00000428247 522 ntBASIC5.37□□□□□ -1.55
C9orf40Q8IXQ3 AC073410.1-201ENST00000435125 589 ntBASIC5.37□□□□□ -1.55
C9orf40Q8IXQ3 AL445665.1-202ENST00000452436 324 ntBASIC5.37□□□□□ -1.55
C9orf40Q8IXQ3 AC108751.3-201ENST00000461814 1020 ntBASIC5.37□□□□□ -1.55
C9orf40Q8IXQ3 AC079080.1-201ENST00000479841 822 ntBASIC5.37□□□□□ -1.55
C9orf40Q8IXQ3 snoU109.5-201ENST00000516231 132 ntBASIC5.37□□□□□ -1.55
C9orf40Q8IXQ3 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.37□□□□□ -1.55
C9orf40Q8IXQ3 AC139365.2-201ENST00000517972 253 ntBASIC5.37□□□□□ -1.55
C9orf40Q8IXQ3 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC5.37□□□□□ -1.55
C9orf40Q8IXQ3 AC078899.1-201ENST00000521432 1185 ntBASIC5.37□□□□□ -1.55
C9orf40Q8IXQ3 AL121594.2-201ENST00000541658 472 ntBASIC5.37□□□□□ -1.55
C9orf40Q8IXQ3 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.37□□□□□ -1.55
C9orf40Q8IXQ3 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC5.37□□□□□ -1.55
C9orf40Q8IXQ3 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC5.37□□□□□ -1.55
C9orf40Q8IXQ3 MIR4260-201ENST00000583107 67 ntBASIC5.37□□□□□ -1.55
C9orf40Q8IXQ3 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC5.37□□□□□ -1.55
C9orf40Q8IXQ3 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC5.37□□□□□ -1.55
C9orf40Q8IXQ3 Xist_exon4.1-201ENST00000615964 126 ntBASIC5.37□□□□□ -1.55
C9orf40Q8IXQ3 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC5.37□□□□□ -1.55
C9orf40Q8IXQ3 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC5.37□□□□□ -1.55
C9orf40Q8IXQ3 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
C9orf40Q8IXQ3 MFSD8-239ENST00000641590 2479 ntBASIC5.37□□□□□ -1.55
C9orf40Q8IXQ3 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
C9orf40Q8IXQ3 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.37□□□□□ -1.55
C9orf40Q8IXQ3 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.37□□□□□ -1.55
C9orf40Q8IXQ3 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms