Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
HERC6Q8IVU3 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC6.62□□□□□ -1.35
HERC6Q8IVU3 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC6.62□□□□□ -1.35
HERC6Q8IVU3 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC6.62□□□□□ -1.35
HERC6Q8IVU3 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
HERC6Q8IVU3 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
HERC6Q8IVU3 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
HERC6Q8IVU3 AC093909.5-201ENST00000621839 1799 ntBASIC6.62□□□□□ -1.35
HERC6Q8IVU3 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.61□□□□□ -1.35
HERC6Q8IVU3 AC034229.2-201ENST00000566945 2508 ntBASIC6.61□□□□□ -1.35
HERC6Q8IVU3 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
HERC6Q8IVU3 AL355377.1-201ENST00000621125 1653 ntBASIC6.61□□□□□ -1.35
HERC6Q8IVU3 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC6.61□□□□□ -1.35
HERC6Q8IVU3 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
HERC6Q8IVU3 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
HERC6Q8IVU3 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
HERC6Q8IVU3 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC6.61□□□□□ -1.35
HERC6Q8IVU3 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC6.61□□□□□ -1.35
HERC6Q8IVU3 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC6.61□□□□□ -1.35
HERC6Q8IVU3 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
HERC6Q8IVU3 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
HERC6Q8IVU3 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
HERC6Q8IVU3 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
HERC6Q8IVU3 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC6.61□□□□□ -1.35
HERC6Q8IVU3 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
HERC6Q8IVU3 FAM32BP-201ENST00000344033 333 ntBASIC6.61□□□□□ -1.35
HERC6Q8IVU3 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
HERC6Q8IVU3 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC6.61□□□□□ -1.35
HERC6Q8IVU3 AL353626.3-201ENST00000413399 657 ntBASIC6.61□□□□□ -1.35
HERC6Q8IVU3 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC6.61□□□□□ -1.35
HERC6Q8IVU3 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC6.61□□□□□ -1.35
HERC6Q8IVU3 RCC2P2-201ENST00000422174 918 ntBASIC6.61□□□□□ -1.35
HERC6Q8IVU3 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC6.61□□□□□ -1.35
HERC6Q8IVU3 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC6.61□□□□□ -1.35
HERC6Q8IVU3 AC002504.1-201ENST00000438281 691 ntBASIC6.61□□□□□ -1.35
HERC6Q8IVU3 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC6.61□□□□□ -1.35
HERC6Q8IVU3 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC6.61□□□□□ -1.35
HERC6Q8IVU3 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC6.61□□□□□ -1.35
HERC6Q8IVU3 GAPDHP23-201ENST00000444823 993 ntBASIC6.61□□□□□ -1.35
HERC6Q8IVU3 RPL32P9-201ENST00000487963 407 ntBASIC6.61□□□□□ -1.35
HERC6Q8IVU3 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC6.61□□□□□ -1.35
HERC6Q8IVU3 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC6.61□□□□□ -1.35
HERC6Q8IVU3 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC6.61□□□□□ -1.35
HERC6Q8IVU3 OR5D2P-201ENST00000524390 911 ntBASIC6.61□□□□□ -1.35
HERC6Q8IVU3 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC6.61□□□□□ -1.35
HERC6Q8IVU3 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC6.61□□□□□ -1.35
HERC6Q8IVU3 AC092865.1-201ENST00000544395 1023 ntBASIC6.61□□□□□ -1.35
HERC6Q8IVU3 AL356801.1-201ENST00000559320 294 ntBASIC6.61□□□□□ -1.35
HERC6Q8IVU3 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC6.61□□□□□ -1.35
HERC6Q8IVU3 AC009120.3-201ENST00000563335 499 ntBASIC6.61□□□□□ -1.35
HERC6Q8IVU3 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
HERC6Q8IVU3 FO393422.1-201ENST00000603908 708 ntBASIC6.61□□□□□ -1.35
HERC6Q8IVU3 AC003001.2-201ENST00000616294 831 ntBASIC6.61□□□□□ -1.35
HERC6Q8IVU3 AC018445.2-201ENST00000622987 260 ntBASIC6.61□□□□□ -1.35
HERC6Q8IVU3 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
HERC6Q8IVU3 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
HERC6Q8IVU3 AC007114.2-201ENST00000576014 4281 ntBASIC6.61□□□□□ -1.35
HERC6Q8IVU3 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
HERC6Q8IVU3 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
HERC6Q8IVU3 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
HERC6Q8IVU3 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
HERC6Q8IVU3 GNL2P1-201ENST00000451274 2190 ntBASIC6.61□□□□□ -1.35
HERC6Q8IVU3 AP002370.1-201ENST00000528055 1602 ntBASIC6.61□□□□□ -1.35
HERC6Q8IVU3 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
HERC6Q8IVU3 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.61□□□□□ -1.35
HERC6Q8IVU3 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
HERC6Q8IVU3 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
HERC6Q8IVU3 AC027279.4-201ENST00000624371 2072 ntBASIC6.61□□□□□ -1.35
HERC6Q8IVU3 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.6□□□□□ -1.35
HERC6Q8IVU3 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
HERC6Q8IVU3 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC6.6□□□□□ -1.35
HERC6Q8IVU3 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
HERC6Q8IVU3 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
HERC6Q8IVU3 AC073429.2-201ENST00000569694 1444 ntBASIC6.6□□□□□ -1.35
HERC6Q8IVU3 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.6□□□□□ -1.35
HERC6Q8IVU3 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC6.6□□□□□ -1.35
HERC6Q8IVU3 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
HERC6Q8IVU3 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC6.6□□□□□ -1.35
HERC6Q8IVU3 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
HERC6Q8IVU3 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
HERC6Q8IVU3 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
HERC6Q8IVU3 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
HERC6Q8IVU3 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
HERC6Q8IVU3 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
HERC6Q8IVU3 RN7SKP162-201ENST00000363605 345 ntBASIC6.6□□□□□ -1.35
HERC6Q8IVU3 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
HERC6Q8IVU3 AL096829.1-201ENST00000413677 457 ntBASIC6.6□□□□□ -1.35
HERC6Q8IVU3 RPL35AP3-201ENST00000414680 288 ntBASIC6.6□□□□□ -1.35
HERC6Q8IVU3 AL451136.1-201ENST00000435399 325 ntBASIC6.6□□□□□ -1.35
HERC6Q8IVU3 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC6.6□□□□□ -1.35
HERC6Q8IVU3 AL512593.1-201ENST00000444758 779 ntBASIC6.6□□□□□ -1.35
HERC6Q8IVU3 AC115223.1-201ENST00000466377 870 ntBASIC6.6□□□□□ -1.35
HERC6Q8IVU3 RN7SL269P-201ENST00000467795 305 ntBASIC6.6□□□□□ -1.35
HERC6Q8IVU3 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
HERC6Q8IVU3 AC027026.1-201ENST00000532323 742 ntBASIC6.6□□□□□ -1.35
HERC6Q8IVU3 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC6.6□□□□□ -1.35
HERC6Q8IVU3 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC6.6□□□□□ -1.35
HERC6Q8IVU3 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC6.6□□□□□ -1.35
HERC6Q8IVU3 AC233702.7-202ENST00000582941 211 ntBASIC6.6□□□□□ -1.35
HERC6Q8IVU3 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC6.6□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms