Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 LRRC37A9P-201ENST00000603850 5376 ntBASIC7.67□□□□□ -1.18
LYSMD3Q7Z3D4 FKTN-202ENST00000357998 2404 ntTSL 5 BASIC7.67□□□□□ -1.18
LYSMD3Q7Z3D4 RSF1-201ENST00000308488 11550 ntAPPRIS P2 TSL 1 (best) BASIC7.67□□□□□ -1.18
LYSMD3Q7Z3D4 EFTUD2-220ENST00000591382 3675 ntAPPRIS P1 TSL 2 BASIC7.67□□□□□ -1.18
LYSMD3Q7Z3D4 ACTA2-AS1-201ENST00000437930 2450 ntTSL 2 BASIC7.67□□□□□ -1.18
LYSMD3Q7Z3D4 PARP2-201ENST00000250416 1886 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
LYSMD3Q7Z3D4 RNU6-1251P-201ENST00000364502 107 ntBASIC7.67□□□□□ -1.18
LYSMD3Q7Z3D4 RNU6-707P-201ENST00000364647 95 ntBASIC7.67□□□□□ -1.18
LYSMD3Q7Z3D4 RNU1-16P-201ENST00000365477 164 ntBASIC7.67□□□□□ -1.18
LYSMD3Q7Z3D4 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC7.67□□□□□ -1.18
LYSMD3Q7Z3D4 MIR555-201ENST00000384987 96 ntBASIC7.67□□□□□ -1.18
LYSMD3Q7Z3D4 RPL34-201ENST00000394665 529 ntAPPRIS P1 TSL 2 BASIC7.67□□□□□ -1.18
LYSMD3Q7Z3D4 RN7SKP207-201ENST00000411204 303 ntBASIC7.67□□□□□ -1.18
LYSMD3Q7Z3D4 VN1R33P-201ENST00000411800 887 ntBASIC7.67□□□□□ -1.18
LYSMD3Q7Z3D4 IFNA12P-201ENST00000413147 571 ntBASIC7.67□□□□□ -1.18
LYSMD3Q7Z3D4 RBMY2JP-201ENST00000425544 1059 ntBASIC7.67□□□□□ -1.18
LYSMD3Q7Z3D4 AC104076.1-201ENST00000428080 265 ntTSL 3 BASIC7.67□□□□□ -1.18
LYSMD3Q7Z3D4 DDX11L10-201ENST00000430178 571 ntBASIC7.67□□□□□ -1.18
LYSMD3Q7Z3D4 RPS21P1-201ENST00000434479 247 ntBASIC7.67□□□□□ -1.18
LYSMD3Q7Z3D4 RPL22P17-201ENST00000438729 315 ntBASIC7.67□□□□□ -1.18
LYSMD3Q7Z3D4 USP9YP15-201ENST00000442391 422 ntBASIC7.67□□□□□ -1.18
LYSMD3Q7Z3D4 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC7.67□□□□□ -1.18
LYSMD3Q7Z3D4 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC7.67□□□□□ -1.18
LYSMD3Q7Z3D4 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC7.67□□□□□ -1.18
LYSMD3Q7Z3D4 AP002884.1-201ENST00000479691 655 ntBASIC7.67□□□□□ -1.18
LYSMD3Q7Z3D4 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC7.67□□□□□ -1.18
LYSMD3Q7Z3D4 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC7.67□□□□□ -1.18
LYSMD3Q7Z3D4 GAPDHP61-201ENST00000507324 1005 ntBASIC7.67□□□□□ -1.18
LYSMD3Q7Z3D4 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC7.67□□□□□ -1.18
LYSMD3Q7Z3D4 AP000426.1-201ENST00000518749 361 ntTSL 3 BASIC7.67□□□□□ -1.18
LYSMD3Q7Z3D4 LINC02055-203ENST00000520068 712 ntTSL 2 BASIC7.67□□□□□ -1.18
LYSMD3Q7Z3D4 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC7.67□□□□□ -1.18
LYSMD3Q7Z3D4 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC7.67□□□□□ -1.18
LYSMD3Q7Z3D4 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC7.67□□□□□ -1.18
LYSMD3Q7Z3D4 AC022898.1-202ENST00000560864 806 ntTSL 2 BASIC7.67□□□□□ -1.18
LYSMD3Q7Z3D4 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC7.67□□□□□ -1.18
LYSMD3Q7Z3D4 AC138811.1-201ENST00000569096 361 ntTSL 3 BASIC7.67□□□□□ -1.18
LYSMD3Q7Z3D4 AC130456.5-201ENST00000569345 510 ntTSL 5 BASIC7.67□□□□□ -1.18
LYSMD3Q7Z3D4 AC040162.2-201ENST00000573092 157 ntBASIC7.67□□□□□ -1.18
LYSMD3Q7Z3D4 AC103808.6-201ENST00000578035 464 ntTSL 3 BASIC7.67□□□□□ -1.18
LYSMD3Q7Z3D4 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC7.67□□□□□ -1.18
LYSMD3Q7Z3D4 GMDS-AS1-215ENST00000606884 580 ntTSL 2 BASIC7.67□□□□□ -1.18
LYSMD3Q7Z3D4 AL451054.1-201ENST00000621770 772 ntBASIC7.67□□□□□ -1.18
LYSMD3Q7Z3D4 AC087821.2-201ENST00000637086 450 ntBASIC7.67□□□□□ -1.18
LYSMD3Q7Z3D4 CFAP61-210ENST00000451767 1946 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
LYSMD3Q7Z3D4 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
LYSMD3Q7Z3D4 CHRM3-201ENST00000255380 8780 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
LYSMD3Q7Z3D4 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC7.67□□□□□ -1.18
LYSMD3Q7Z3D4 LRBA-204ENST00000507224 8826 ntTSL 5 BASIC7.67□□□□□ -1.18
LYSMD3Q7Z3D4 FBXL13-201ENST00000313221 2744 ntTSL 2 BASIC7.67□□□□□ -1.18
LYSMD3Q7Z3D4 AC074198.1-201ENST00000506546 1397 ntBASIC7.67□□□□□ -1.18
LYSMD3Q7Z3D4 DCLRE1C-211ENST00000396817 2761 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
LYSMD3Q7Z3D4 RNF139-AS1-201ENST00000499418 5654 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
LYSMD3Q7Z3D4 AL022578.1-201ENST00000439330 1433 ntBASIC7.67□□□□□ -1.18
LYSMD3Q7Z3D4 MBL2-201ENST00000373968 3569 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
LYSMD3Q7Z3D4 ABCC4-201ENST00000376887 5839 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
LYSMD3Q7Z3D4 NPIPB5-207ENST00000451409 3660 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
LYSMD3Q7Z3D4 OR10W1-201ENST00000395079 1469 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
LYSMD3Q7Z3D4 AL354719.2-201ENST00000429530 1454 ntTSL 2 BASIC7.67□□□□□ -1.18
LYSMD3Q7Z3D4 AC116366.1-201ENST00000443093 3730 ntTSL 5 BASIC7.67□□□□□ -1.18
LYSMD3Q7Z3D4 AL512662.1-201ENST00000624850 2251 ntBASIC7.67□□□□□ -1.18
LYSMD3Q7Z3D4 ARHGEF12-201ENST00000356641 6891 ntTSL 5 BASIC7.67□□□□□ -1.18
LYSMD3Q7Z3D4 ATP5A1P10-201ENST00000622403 1603 ntBASIC7.67□□□□□ -1.18
LYSMD3Q7Z3D4 UFL1-201ENST00000369278 4224 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
LYSMD3Q7Z3D4 CU638689.4-201ENST00000623047 5990 ntTSL 5 BASIC7.66□□□□□ -1.18
LYSMD3Q7Z3D4 LRRC37A-201ENST00000320254 5177 ntAPPRIS P2 TSL 1 (best) BASIC7.66□□□□□ -1.18
LYSMD3Q7Z3D4 AC053481.2-201ENST00000602493 1815 ntTSL 5 BASIC7.66□□□□□ -1.18
LYSMD3Q7Z3D4 AL021396.1-202ENST00000457707 1929 ntTSL 2 BASIC7.66□□□□□ -1.18
LYSMD3Q7Z3D4 PLEKHM3-202ENST00000427836 9807 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
LYSMD3Q7Z3D4 CDY2B-201ENST00000382867 1961 ntAPPRIS ALT1 BASIC7.66□□□□□ -1.18
LYSMD3Q7Z3D4 BBX-207ENST00000416476 2178 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
LYSMD3Q7Z3D4 ZNF225-201ENST00000262894 4482 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
LYSMD3Q7Z3D4 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
LYSMD3Q7Z3D4 AC103591.2-201ENST00000265259 766 ntBASIC7.66□□□□□ -1.18
LYSMD3Q7Z3D4 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
LYSMD3Q7Z3D4 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
LYSMD3Q7Z3D4 RNU6-1090P-201ENST00000364065 94 ntBASIC7.66□□□□□ -1.18
LYSMD3Q7Z3D4 SNORA4.1-201ENST00000364263 144 ntBASIC7.66□□□□□ -1.18
LYSMD3Q7Z3D4 RNU6-534P-201ENST00000364877 106 ntBASIC7.66□□□□□ -1.18
LYSMD3Q7Z3D4 COQ3-202ENST00000369240 646 ntTSL 5 BASIC7.66□□□□□ -1.18
LYSMD3Q7Z3D4 Y_RNA.573-201ENST00000384763 105 ntBASIC7.66□□□□□ -1.18
LYSMD3Q7Z3D4 HMGB3P1-201ENST00000393368 573 ntBASIC7.66□□□□□ -1.18
LYSMD3Q7Z3D4 C1D-203ENST00000409302 772 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
LYSMD3Q7Z3D4 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC7.66□□□□□ -1.18
LYSMD3Q7Z3D4 BCRP8-201ENST00000412037 255 ntBASIC7.66□□□□□ -1.18
LYSMD3Q7Z3D4 AC090617.1-201ENST00000413674 323 ntTSL 2 BASIC7.66□□□□□ -1.18
LYSMD3Q7Z3D4 AC109638.1-201ENST00000417406 326 ntBASIC7.66□□□□□ -1.18
LYSMD3Q7Z3D4 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC7.66□□□□□ -1.18
LYSMD3Q7Z3D4 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC7.66□□□□□ -1.18
LYSMD3Q7Z3D4 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC7.66□□□□□ -1.18
LYSMD3Q7Z3D4 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC7.66□□□□□ -1.18
LYSMD3Q7Z3D4 AC007435.1-201ENST00000421086 415 ntBASIC7.66□□□□□ -1.18
LYSMD3Q7Z3D4 AC009237.2-201ENST00000421358 284 ntBASIC7.66□□□□□ -1.18
LYSMD3Q7Z3D4 PTCSC2-201ENST00000430058 204 ntTSL 2 BASIC7.66□□□□□ -1.18
LYSMD3Q7Z3D4 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC7.66□□□□□ -1.18
LYSMD3Q7Z3D4 AC069154.1-201ENST00000432914 542 ntBASIC7.66□□□□□ -1.18
LYSMD3Q7Z3D4 CYP2C56P-201ENST00000440076 291 ntBASIC7.66□□□□□ -1.18
LYSMD3Q7Z3D4 AC123904.1-201ENST00000441072 368 ntBASIC7.66□□□□□ -1.18
LYSMD3Q7Z3D4 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC7.66□□□□□ -1.18
LYSMD3Q7Z3D4 RPS29P5-201ENST00000452777 171 ntBASIC7.66□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 157.7 ms