Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC5.03□□□□□ -1.6
LRRK2Q5S007 BNIP3P33-201ENST00000598912 569 ntBASIC5.03□□□□□ -1.6
LRRK2Q5S007 ADAMTS6-203ENST00000381055 7311 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
LRRK2Q5S007 KPNA6-201ENST00000373625 7378 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
LRRK2Q5S007 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.03□□□□□ -1.6
LRRK2Q5S007 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
LRRK2Q5S007 TRIM5-202ENST00000380034 2991 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
LRRK2Q5S007 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
LRRK2Q5S007 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
LRRK2Q5S007 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC5.03□□□□□ -1.6
LRRK2Q5S007 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.03□□□□□ -1.6
LRRK2Q5S007 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC5.03□□□□□ -1.61
LRRK2Q5S007 ATXN3-216ENST00000545170 6950 ntTSL 5 BASIC5.02□□□□□ -1.61
LRRK2Q5S007 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
LRRK2Q5S007 E2F8-201ENST00000250024 3240 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
LRRK2Q5S007 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC5.02□□□□□ -1.61
LRRK2Q5S007 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC5.02□□□□□ -1.61
LRRK2Q5S007 SNORA62-201ENST00000365493 153 ntBASIC5.02□□□□□ -1.61
LRRK2Q5S007 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC5.02□□□□□ -1.61
LRRK2Q5S007 CAV1-204ENST00000393470 598 ntTSL 4 BASIC5.02□□□□□ -1.61
LRRK2Q5S007 RNU4ATAC2P-201ENST00000408674 126 ntBASIC5.02□□□□□ -1.61
LRRK2Q5S007 AL133482.1-201ENST00000415988 498 ntBASIC5.02□□□□□ -1.61
LRRK2Q5S007 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.02□□□□□ -1.61
LRRK2Q5S007 AL133173.1-201ENST00000423458 397 ntBASIC5.02□□□□□ -1.61
LRRK2Q5S007 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC5.02□□□□□ -1.61
LRRK2Q5S007 SDC4P-201ENST00000453285 601 ntBASIC5.02□□□□□ -1.61
LRRK2Q5S007 RN7SL481P-201ENST00000477764 299 ntBASIC5.02□□□□□ -1.61
LRRK2Q5S007 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.02□□□□□ -1.61
LRRK2Q5S007 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC5.02□□□□□ -1.61
LRRK2Q5S007 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC5.02□□□□□ -1.61
LRRK2Q5S007 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.02□□□□□ -1.61
LRRK2Q5S007 AC015923.1-202ENST00000581421 491 ntTSL 2 BASIC5.02□□□□□ -1.61
LRRK2Q5S007 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
LRRK2Q5S007 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.02□□□□□ -1.61
LRRK2Q5S007 SPATA31B1P-201ENST00000434692 4016 ntBASIC5.02□□□□□ -1.61
LRRK2Q5S007 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
LRRK2Q5S007 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
LRRK2Q5S007 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
LRRK2Q5S007 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
LRRK2Q5S007 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
LRRK2Q5S007 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
LRRK2Q5S007 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.02□□□□□ -1.61
LRRK2Q5S007 DYNC1I2P1-201ENST00000435916 1838 ntBASIC5.02□□□□□ -1.61
LRRK2Q5S007 AC091046.3-201ENST00000631455 1574 ntBASIC5.02□□□□□ -1.61
LRRK2Q5S007 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.02□□□□□ -1.61
LRRK2Q5S007 EEF1A1P24-201ENST00000451469 1378 ntBASIC5.02□□□□□ -1.61
LRRK2Q5S007 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
LRRK2Q5S007 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.02□□□□□ -1.61
LRRK2Q5S007 AL161747.1-201ENST00000480068 358 ntBASIC5.02□□□□□ -1.61
LRRK2Q5S007 RN7SL205P-201ENST00000490174 284 ntBASIC5.02□□□□□ -1.61
LRRK2Q5S007 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
LRRK2Q5S007 AC034205.1-201ENST00000520621 638 ntBASIC5.02□□□□□ -1.61
LRRK2Q5S007 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.02□□□□□ -1.61
LRRK2Q5S007 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC5.02□□□□□ -1.61
LRRK2Q5S007 RN7SL52P-201ENST00000584271 284 ntBASIC5.02□□□□□ -1.61
LRRK2Q5S007 AC011447.4-201ENST00000587562 111 ntBASIC5.02□□□□□ -1.61
LRRK2Q5S007 AC069307.1-201ENST00000602820 447 ntBASIC5.02□□□□□ -1.61
LRRK2Q5S007 RN7SL722P-201ENST00000617780 284 ntBASIC5.02□□□□□ -1.61
LRRK2Q5S007 RN7SL565P-201ENST00000618246 284 ntBASIC5.02□□□□□ -1.61
LRRK2Q5S007 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
LRRK2Q5S007 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
LRRK2Q5S007 AC087516.1-201ENST00000561236 2428 ntBASIC5.02□□□□□ -1.61
LRRK2Q5S007 LY75-201ENST00000263636 6886 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
LRRK2Q5S007 AC105114.1-201ENST00000624795 1862 ntBASIC5.02□□□□□ -1.61
LRRK2Q5S007 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
LRRK2Q5S007 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.02□□□□□ -1.61
LRRK2Q5S007 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC5.01□□□□□ -1.61
LRRK2Q5S007 RPL23P2-201ENST00000320371 421 ntBASIC5.01□□□□□ -1.61
LRRK2Q5S007 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
LRRK2Q5S007 GLULP6-201ENST00000399502 913 ntBASIC5.01□□□□□ -1.61
LRRK2Q5S007 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.01□□□□□ -1.61
LRRK2Q5S007 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC5.01□□□□□ -1.61
LRRK2Q5S007 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC5.01□□□□□ -1.61
LRRK2Q5S007 RN7SL591P-201ENST00000496150 292 ntBASIC5.01□□□□□ -1.61
LRRK2Q5S007 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.01□□□□□ -1.61
LRRK2Q5S007 RNU6-941P-201ENST00000516346 108 ntBASIC5.01□□□□□ -1.61
LRRK2Q5S007 HMGB1P23-201ENST00000518743 568 ntBASIC5.01□□□□□ -1.61
LRRK2Q5S007 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.01□□□□□ -1.61
LRRK2Q5S007 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.01□□□□□ -1.61
LRRK2Q5S007 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
LRRK2Q5S007 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.01□□□□□ -1.61
LRRK2Q5S007 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.01□□□□□ -1.61
LRRK2Q5S007 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
LRRK2Q5S007 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
LRRK2Q5S007 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
LRRK2Q5S007 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
LRRK2Q5S007 CHURC1-208ENST00000607599 3615 ntTSL 2 BASIC5.01□□□□□ -1.61
LRRK2Q5S007 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.01□□□□□ -1.61
LRRK2Q5S007 AL731532.1-201ENST00000623972 4236 ntBASIC5.01□□□□□ -1.61
LRRK2Q5S007 IMMTP1-201ENST00000435590 2219 ntBASIC5.01□□□□□ -1.61
LRRK2Q5S007 OR4K13-203ENST00000641904 5684 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
LRRK2Q5S007 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC5.01□□□□□ -1.61
LRRK2Q5S007 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.01□□□□□ -1.61
LRRK2Q5S007 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC5.01□□□□□ -1.61
LRRK2Q5S007 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
LRRK2Q5S007 NEK2P4-201ENST00000425793 1329 ntBASIC5.01□□□□□ -1.61
LRRK2Q5S007 AL512310.3-201ENST00000547023 1335 ntBASIC5.01□□□□□ -1.61
LRRK2Q5S007 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
LRRK2Q5S007 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
LRRK2Q5S007 AC135068.1-201ENST00000332663 1084 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 290.2 ms