Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC6.39□□□□□ -1.39
CCDC38Q502W7 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC6.39□□□□□ -1.39
CCDC38Q502W7 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC6.39□□□□□ -1.39
CCDC38Q502W7 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC38Q502W7 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC38Q502W7 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC38Q502W7 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC6.39□□□□□ -1.39
CCDC38Q502W7 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
CCDC38Q502W7 RN7SKP184-201ENST00000362348 333 ntBASIC6.39□□□□□ -1.39
CCDC38Q502W7 GSTA12P-201ENST00000402398 508 ntBASIC6.39□□□□□ -1.39
CCDC38Q502W7 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC38Q502W7 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC6.39□□□□□ -1.39
CCDC38Q502W7 AC015977.1-201ENST00000418887 292 ntBASIC6.39□□□□□ -1.39
CCDC38Q502W7 REREP1Y-201ENST00000422655 198 ntBASIC6.39□□□□□ -1.39
CCDC38Q502W7 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC6.39□□□□□ -1.39
CCDC38Q502W7 GAPDHP75-201ENST00000433910 943 ntBASIC6.39□□□□□ -1.39
CCDC38Q502W7 AL645939.3-201ENST00000435408 225 ntBASIC6.39□□□□□ -1.39
CCDC38Q502W7 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC6.39□□□□□ -1.39
CCDC38Q502W7 REREP2Y-201ENST00000439103 200 ntBASIC6.39□□□□□ -1.39
CCDC38Q502W7 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC6.39□□□□□ -1.39
CCDC38Q502W7 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC6.39□□□□□ -1.39
CCDC38Q502W7 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC6.39□□□□□ -1.39
CCDC38Q502W7 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC6.39□□□□□ -1.39
CCDC38Q502W7 AC016908.1-201ENST00000442571 1219 ntBASIC6.39□□□□□ -1.39
CCDC38Q502W7 WDR82P2-201ENST00000444540 928 ntBASIC6.39□□□□□ -1.39
CCDC38Q502W7 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC6.39□□□□□ -1.39
CCDC38Q502W7 AC093663.2-201ENST00000484625 313 ntBASIC6.39□□□□□ -1.39
CCDC38Q502W7 AL035690.1-201ENST00000490892 383 ntBASIC6.39□□□□□ -1.39
CCDC38Q502W7 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC6.39□□□□□ -1.39
CCDC38Q502W7 OR9N1P-202ENST00000494289 481 ntBASIC6.39□□□□□ -1.39
CCDC38Q502W7 AC008945.1-201ENST00000505144 499 ntBASIC6.39□□□□□ -1.39
CCDC38Q502W7 AC010343.2-201ENST00000510162 224 ntBASIC6.39□□□□□ -1.39
CCDC38Q502W7 UGT2A3P7-201ENST00000510485 734 ntBASIC6.39□□□□□ -1.39
CCDC38Q502W7 RPA2P3-201ENST00000533268 770 ntBASIC6.39□□□□□ -1.39
CCDC38Q502W7 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
CCDC38Q502W7 AC009729.1-201ENST00000548873 1133 ntBASIC6.39□□□□□ -1.39
CCDC38Q502W7 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC6.39□□□□□ -1.39
CCDC38Q502W7 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC6.39□□□□□ -1.39
CCDC38Q502W7 AC020978.7-201ENST00000575953 1187 ntBASIC6.39□□□□□ -1.39
CCDC38Q502W7 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC6.39□□□□□ -1.39
CCDC38Q502W7 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC6.39□□□□□ -1.39
CCDC38Q502W7 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC6.39□□□□□ -1.39
CCDC38Q502W7 AL589863.1-201ENST00000595383 631 ntBASIC6.39□□□□□ -1.39
CCDC38Q502W7 AC005479.3-201ENST00000602790 431 ntBASIC6.39□□□□□ -1.39
CCDC38Q502W7 AC006924.1-201ENST00000610750 559 ntBASIC6.39□□□□□ -1.39
CCDC38Q502W7 AL589743.6-201ENST00000611025 117 ntBASIC6.39□□□□□ -1.39
CCDC38Q502W7 MIR6885-201ENST00000612241 66 ntBASIC6.39□□□□□ -1.39
CCDC38Q502W7 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC38Q502W7 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC6.39□□□□□ -1.39
CCDC38Q502W7 MIR7159-201ENST00000620587 66 ntBASIC6.39□□□□□ -1.39
CCDC38Q502W7 HDAC1P2-201ENST00000453661 1398 ntBASIC6.39□□□□□ -1.39
CCDC38Q502W7 SMG1P5-202ENST00000529428 4219 ntBASIC6.39□□□□□ -1.39
CCDC38Q502W7 SMG1P2-201ENST00000566127 4221 ntBASIC6.39□□□□□ -1.39
CCDC38Q502W7 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC38Q502W7 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC38Q502W7 AC110792.3-201ENST00000595906 1614 ntBASIC6.39□□□□□ -1.39
CCDC38Q502W7 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC38Q502W7 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC38Q502W7 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
CCDC38Q502W7 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC38Q502W7 CDC27P2-201ENST00000425026 1922 ntBASIC6.38□□□□□ -1.39
CCDC38Q502W7 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CCDC38Q502W7 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CCDC38Q502W7 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC6.38□□□□□ -1.39
CCDC38Q502W7 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC6.38□□□□□ -1.39
CCDC38Q502W7 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC6.38□□□□□ -1.39
CCDC38Q502W7 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CCDC38Q502W7 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CCDC38Q502W7 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CCDC38Q502W7 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CCDC38Q502W7 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
CCDC38Q502W7 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC6.38□□□□□ -1.39
CCDC38Q502W7 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CCDC38Q502W7 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
CCDC38Q502W7 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
CCDC38Q502W7 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
CCDC38Q502W7 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.38□□□□□ -1.39
CCDC38Q502W7 AC003045.1-201ENST00000398779 713 ntBASIC6.38□□□□□ -1.39
CCDC38Q502W7 BTF3P9-201ENST00000418784 283 ntBASIC6.38□□□□□ -1.39
CCDC38Q502W7 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC6.38□□□□□ -1.39
CCDC38Q502W7 AC073508.1-201ENST00000428866 656 ntBASIC6.38□□□□□ -1.39
CCDC38Q502W7 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC6.38□□□□□ -1.39
CCDC38Q502W7 AL022324.2-201ENST00000434827 780 ntBASIC6.38□□□□□ -1.39
CCDC38Q502W7 AC092601.1-201ENST00000444526 383 ntBASIC6.38□□□□□ -1.39
CCDC38Q502W7 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC6.38□□□□□ -1.39
CCDC38Q502W7 COX4I1P2-201ENST00000447446 547 ntBASIC6.38□□□□□ -1.39
CCDC38Q502W7 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC6.38□□□□□ -1.39
CCDC38Q502W7 RARRES2P3-201ENST00000457739 473 ntBASIC6.38□□□□□ -1.39
CCDC38Q502W7 CABYRP1-201ENST00000465493 1045 ntBASIC6.38□□□□□ -1.39
CCDC38Q502W7 AP003385.3-201ENST00000472498 287 ntBASIC6.38□□□□□ -1.39
CCDC38Q502W7 LARP7P4-201ENST00000481075 878 ntBASIC6.38□□□□□ -1.39
CCDC38Q502W7 RN7SL502P-201ENST00000481857 290 ntBASIC6.38□□□□□ -1.39
CCDC38Q502W7 RPS7P11-201ENST00000484240 586 ntBASIC6.38□□□□□ -1.39
CCDC38Q502W7 RN7SL612P-201ENST00000497704 295 ntBASIC6.38□□□□□ -1.39
CCDC38Q502W7 HMGB1P3-201ENST00000502802 616 ntBASIC6.38□□□□□ -1.39
CCDC38Q502W7 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC6.38□□□□□ -1.39
CCDC38Q502W7 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC6.38□□□□□ -1.39
CCDC38Q502W7 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC6.38□□□□□ -1.39
CCDC38Q502W7 AC008429.4-201ENST00000521201 182 ntBASIC6.38□□□□□ -1.39
CCDC38Q502W7 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms