Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 AC138517.1-201ENST00000515724 568 ntBASIC5.39□□□□□ -1.55
RFX4Q33E94 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC5.39□□□□□ -1.55
RFX4Q33E94 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.39□□□□□ -1.55
RFX4Q33E94 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC5.39□□□□□ -1.55
RFX4Q33E94 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.39□□□□□ -1.55
RFX4Q33E94 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC5.39□□□□□ -1.55
RFX4Q33E94 AC016839.1-201ENST00000578162 867 ntBASIC5.39□□□□□ -1.55
RFX4Q33E94 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.39□□□□□ -1.55
RFX4Q33E94 AC012368.3-201ENST00000604190 219 ntBASIC5.39□□□□□ -1.55
RFX4Q33E94 RPSAP75-201ENST00000605848 301 ntBASIC5.39□□□□□ -1.55
RFX4Q33E94 AL645933.2-201ENST00000606743 1207 ntBASIC5.39□□□□□ -1.55
RFX4Q33E94 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC5.39□□□□□ -1.55
RFX4Q33E94 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RFX4Q33E94 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RFX4Q33E94 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
RFX4Q33E94 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.39□□□□□ -1.55
RFX4Q33E94 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
RFX4Q33E94 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.39□□□□□ -1.55
RFX4Q33E94 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RFX4Q33E94 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RFX4Q33E94 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.39□□□□□ -1.55
RFX4Q33E94 MFSD8-239ENST00000641590 2479 ntBASIC5.39□□□□□ -1.55
RFX4Q33E94 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.39□□□□□ -1.55
RFX4Q33E94 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RFX4Q33E94 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.39□□□□□ -1.55
RFX4Q33E94 AC092376.2-201ENST00000622621 4116 ntBASIC5.39□□□□□ -1.55
RFX4Q33E94 TCP11X1-202ENST00000622971 1372 ntBASIC5.39□□□□□ -1.55
RFX4Q33E94 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RFX4Q33E94 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
RFX4Q33E94 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.39□□□□□ -1.55
RFX4Q33E94 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RFX4Q33E94 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RFX4Q33E94 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RFX4Q33E94 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RFX4Q33E94 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC5.38□□□□□ -1.55
RFX4Q33E94 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.38□□□□□ -1.55
RFX4Q33E94 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
RFX4Q33E94 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.38□□□□□ -1.55
RFX4Q33E94 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RFX4Q33E94 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
RFX4Q33E94 AC011933.2-201ENST00000578539 2790 ntBASIC5.38□□□□□ -1.55
RFX4Q33E94 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
RFX4Q33E94 SNORA21-201ENST00000362423 132 ntBASIC5.38□□□□□ -1.55
RFX4Q33E94 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RFX4Q33E94 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.38□□□□□ -1.55
RFX4Q33E94 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
RFX4Q33E94 AL133260.1-201ENST00000405720 405 ntBASIC5.38□□□□□ -1.55
RFX4Q33E94 AL358178.1-201ENST00000407698 397 ntBASIC5.38□□□□□ -1.55
RFX4Q33E94 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC5.38□□□□□ -1.55
RFX4Q33E94 AL133482.1-201ENST00000415988 498 ntBASIC5.38□□□□□ -1.55
RFX4Q33E94 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RFX4Q33E94 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
RFX4Q33E94 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
RFX4Q33E94 AC010086.1-201ENST00000437359 1052 ntBASIC5.38□□□□□ -1.55
RFX4Q33E94 AC064862.5-201ENST00000440618 334 ntBASIC5.38□□□□□ -1.55
RFX4Q33E94 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.38□□□□□ -1.55
RFX4Q33E94 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.38□□□□□ -1.55
RFX4Q33E94 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC5.38□□□□□ -1.55
RFX4Q33E94 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC5.38□□□□□ -1.55
RFX4Q33E94 RPL12P30-201ENST00000488389 499 ntBASIC5.38□□□□□ -1.55
RFX4Q33E94 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
RFX4Q33E94 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC5.38□□□□□ -1.55
RFX4Q33E94 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC5.38□□□□□ -1.55
RFX4Q33E94 SNX18P25-201ENST00000510539 758 ntBASIC5.38□□□□□ -1.55
RFX4Q33E94 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RFX4Q33E94 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC5.38□□□□□ -1.55
RFX4Q33E94 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.38□□□□□ -1.55
RFX4Q33E94 NPIPB14P-203ENST00000532298 987 ntBASIC5.38□□□□□ -1.55
RFX4Q33E94 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.38□□□□□ -1.55
RFX4Q33E94 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC5.38□□□□□ -1.55
RFX4Q33E94 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC5.38□□□□□ -1.55
RFX4Q33E94 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RFX4Q33E94 AP005136.2-201ENST00000583253 1049 ntBASIC5.38□□□□□ -1.55
RFX4Q33E94 MIR7853-201ENST00000584820 132 ntBASIC5.38□□□□□ -1.55
RFX4Q33E94 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.38□□□□□ -1.55
RFX4Q33E94 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC5.38□□□□□ -1.55
RFX4Q33E94 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC5.38□□□□□ -1.55
RFX4Q33E94 AL139124.1-201ENST00000609123 421 ntBASIC5.38□□□□□ -1.55
RFX4Q33E94 AL138693.1-201ENST00000622219 129 ntBASIC5.38□□□□□ -1.55
RFX4Q33E94 AL357562.1-201ENST00000624911 609 ntBASIC5.38□□□□□ -1.55
RFX4Q33E94 AC007603.3-201ENST00000636915 979 ntBASIC5.38□□□□□ -1.55
RFX4Q33E94 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RFX4Q33E94 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RFX4Q33E94 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC5.38□□□□□ -1.55
RFX4Q33E94 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.38□□□□□ -1.55
RFX4Q33E94 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.38□□□□□ -1.55
RFX4Q33E94 AC068870.3-201ENST00000625077 2536 ntBASIC5.38□□□□□ -1.55
RFX4Q33E94 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RFX4Q33E94 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
RFX4Q33E94 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RFX4Q33E94 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.38□□□□□ -1.55
RFX4Q33E94 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RFX4Q33E94 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RFX4Q33E94 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RFX4Q33E94 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
RFX4Q33E94 OR9K1P-202ENST00000641111 3217 ntBASIC5.37□□□□□ -1.55
RFX4Q33E94 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.37□□□□□ -1.55
RFX4Q33E94 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.37□□□□□ -1.55
RFX4Q33E94 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
RFX4Q33E94 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms