Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 RPL36AP33-201ENST00000450395 310 ntBASIC7.07□□□□□ -1.28
PCDH1Q08174 VN1R6P-201ENST00000458417 907 ntBASIC7.07□□□□□ -1.28
PCDH1Q08174 AC078788.2-201ENST00000462300 382 ntTSL 3 BASIC7.07□□□□□ -1.28
PCDH1Q08174 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC7.07□□□□□ -1.28
PCDH1Q08174 AMTN-202ENST00000504451 761 ntAPPRIS ALT1 TSL 1 (best) BASIC7.07□□□□□ -1.28
PCDH1Q08174 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC7.07□□□□□ -1.28
PCDH1Q08174 AC079395.1-201ENST00000510981 262 ntBASIC7.07□□□□□ -1.28
PCDH1Q08174 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC7.07□□□□□ -1.28
PCDH1Q08174 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC7.07□□□□□ -1.28
PCDH1Q08174 TPT1-AS1-214ENST00000521507 665 ntTSL 5 BASIC7.07□□□□□ -1.28
PCDH1Q08174 AC099805.1-205ENST00000521794 837 ntTSL 2 BASIC7.07□□□□□ -1.28
PCDH1Q08174 AC103681.2-201ENST00000527450 567 ntTSL 4 BASIC7.07□□□□□ -1.28
PCDH1Q08174 AC118273.2-201ENST00000532092 465 ntBASIC7.07□□□□□ -1.28
PCDH1Q08174 OR9G2P-201ENST00000533326 880 ntBASIC7.07□□□□□ -1.28
PCDH1Q08174 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC7.07□□□□□ -1.28
PCDH1Q08174 AC087257.2-201ENST00000538759 928 ntBASIC7.07□□□□□ -1.28
PCDH1Q08174 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC7.07□□□□□ -1.28
PCDH1Q08174 DPPA3P2-201ENST00000553589 478 ntBASIC7.07□□□□□ -1.28
PCDH1Q08174 COX6CP11-201ENST00000555293 229 ntBASIC7.07□□□□□ -1.28
PCDH1Q08174 AL049870.4-201ENST00000555741 486 ntBASIC7.07□□□□□ -1.28
PCDH1Q08174 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC7.07□□□□□ -1.28
PCDH1Q08174 RBM22P12-201ENST00000567098 1255 ntBASIC7.07□□□□□ -1.28
PCDH1Q08174 AC099518.1-201ENST00000568032 841 ntTSL 3 BASIC7.07□□□□□ -1.28
PCDH1Q08174 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC7.07□□□□□ -1.28
PCDH1Q08174 TTN-AS1-215ENST00000585451 949 ntTSL 5 BASIC7.07□□□□□ -1.28
PCDH1Q08174 C10orf82-203ENST00000588184 852 ntAPPRIS ALT2 TSL 3 BASIC7.07□□□□□ -1.28
PCDH1Q08174 RPS11-203ENST00000596873 583 ntTSL 2 BASIC7.07□□□□□ -1.28
PCDH1Q08174 AP001267.4-201ENST00000602598 545 ntBASIC7.07□□□□□ -1.28
PCDH1Q08174 AC007262.1-201ENST00000604099 321 ntBASIC7.07□□□□□ -1.28
PCDH1Q08174 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC7.07□□□□□ -1.28
PCDH1Q08174 OR6L2P-201ENST00000608207 925 ntBASIC7.07□□□□□ -1.28
PCDH1Q08174 AP000238.1-201ENST00000608759 426 ntBASIC7.07□□□□□ -1.28
PCDH1Q08174 uc_338.21-201ENST00000622458 147 ntBASIC7.07□□□□□ -1.28
PCDH1Q08174 RPL23AP61-201ENST00000623642 466 ntBASIC7.07□□□□□ -1.28
PCDH1Q08174 TTN-AS1-265ENST00000627661 806 ntTSL 5 BASIC7.07□□□□□ -1.28
PCDH1Q08174 AL596275.2-203ENST00000641951 371 ntBASIC7.07□□□□□ -1.28
PCDH1Q08174 CDY7P-201ENST00000429883 1604 ntBASIC7.07□□□□□ -1.28
PCDH1Q08174 ZNF90-201ENST00000418063 2310 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
PCDH1Q08174 PNN-201ENST00000216832 3576 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
PCDH1Q08174 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
PCDH1Q08174 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
PCDH1Q08174 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
PCDH1Q08174 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC7.07□□□□□ -1.28
PCDH1Q08174 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
PCDH1Q08174 SPARCL1-201ENST00000282470 2906 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
PCDH1Q08174 AC106712.1-201ENST00000483840 1888 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
PCDH1Q08174 ZMYND11-215ENST00000558098 1859 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
PCDH1Q08174 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC7.07□□□□□ -1.28
PCDH1Q08174 AC009237.3-203ENST00000442128 3551 ntBASIC7.07□□□□□ -1.28
PCDH1Q08174 SAMMSON-203ENST00000641005 2168 ntBASIC7.06□□□□□ -1.28
PCDH1Q08174 AC117409.1-201ENST00000470499 1310 ntBASIC7.06□□□□□ -1.28
PCDH1Q08174 NR5A2-206ENST00000544748 4775 ntAPPRIS ALT1 TSL 2 BASIC7.06□□□□□ -1.28
PCDH1Q08174 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
PCDH1Q08174 RAI14-208ENST00000506376 3091 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
PCDH1Q08174 SLC36A4-206ENST00000529184 1917 ntTSL 2 BASIC7.06□□□□□ -1.28
PCDH1Q08174 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
PCDH1Q08174 AC016716.1-201ENST00000265882 708 ntBASIC7.06□□□□□ -1.28
PCDH1Q08174 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
PCDH1Q08174 KLRG1-202ENST00000356986 1206 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
PCDH1Q08174 U3.1-201ENST00000362500 215 ntBASIC7.06□□□□□ -1.28
PCDH1Q08174 LELP1-201ENST00000368747 523 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
PCDH1Q08174 RPS27AP11-201ENST00000402798 447 ntBASIC7.06□□□□□ -1.28
PCDH1Q08174 VN1R12P-201ENST00000403778 876 ntBASIC7.06□□□□□ -1.28
PCDH1Q08174 FTH1P26-201ENST00000406512 701 ntBASIC7.06□□□□□ -1.28
PCDH1Q08174 CCDC58P2-201ENST00000417131 366 ntBASIC7.06□□□□□ -1.28
PCDH1Q08174 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC7.06□□□□□ -1.28
PCDH1Q08174 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC7.06□□□□□ -1.28
PCDH1Q08174 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC7.06□□□□□ -1.28
PCDH1Q08174 DSTNP5-201ENST00000427921 523 ntBASIC7.06□□□□□ -1.28
PCDH1Q08174 MTCO1P3-201ENST00000429327 192 ntBASIC7.06□□□□□ -1.28
PCDH1Q08174 NDUFB3-202ENST00000433898 503 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
PCDH1Q08174 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC7.06□□□□□ -1.28
PCDH1Q08174 HSD17B3-AS1-201ENST00000448857 1072 ntTSL 2 BASIC7.06□□□□□ -1.28
PCDH1Q08174 FAR2P1-206ENST00000449736 709 ntBASIC7.06□□□□□ -1.28
PCDH1Q08174 ATP5G1P6-201ENST00000451206 412 ntBASIC7.06□□□□□ -1.28
PCDH1Q08174 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC7.06□□□□□ -1.28
PCDH1Q08174 RN7SL213P-201ENST00000463482 317 ntBASIC7.06□□□□□ -1.28
PCDH1Q08174 RPL23AP37-201ENST00000479658 549 ntBASIC7.06□□□□□ -1.28
PCDH1Q08174 OR4G11P-201ENST00000492842 939 ntBASIC7.06□□□□□ -1.28
PCDH1Q08174 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC7.06□□□□□ -1.28
PCDH1Q08174 CCDC11P1-201ENST00000503137 1162 ntBASIC7.06□□□□□ -1.28
PCDH1Q08174 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
PCDH1Q08174 AC027801.3-201ENST00000515049 698 ntBASIC7.06□□□□□ -1.28
PCDH1Q08174 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC7.06□□□□□ -1.28
PCDH1Q08174 AC023632.1-201ENST00000518463 375 ntBASIC7.06□□□□□ -1.28
PCDH1Q08174 AC025881.1-201ENST00000518851 512 ntBASIC7.06□□□□□ -1.28
PCDH1Q08174 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC7.06□□□□□ -1.28
PCDH1Q08174 ST13P6-201ENST00000522430 1102 ntBASIC7.06□□□□□ -1.28
PCDH1Q08174 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC7.06□□□□□ -1.28
PCDH1Q08174 AC083973.1-201ENST00000523459 590 ntTSL 2 BASIC7.06□□□□□ -1.28
PCDH1Q08174 AP001207.1-201ENST00000524051 481 ntBASIC7.06□□□□□ -1.28
PCDH1Q08174 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC7.06□□□□□ -1.28
PCDH1Q08174 VDAC2P2-201ENST00000544463 901 ntBASIC7.06□□□□□ -1.28
PCDH1Q08174 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC7.06□□□□□ -1.28
PCDH1Q08174 AC023813.3-201ENST00000561876 539 ntTSL 3 BASIC7.06□□□□□ -1.28
PCDH1Q08174 MT1B-202ENST00000562399 351 ntTSL 3 BASIC7.06□□□□□ -1.28
PCDH1Q08174 AC026461.2-201ENST00000568608 244 ntTSL 5 BASIC7.06□□□□□ -1.28
PCDH1Q08174 RN7SL311P-201ENST00000579858 306 ntBASIC7.06□□□□□ -1.28
PCDH1Q08174 LINC01919-203ENST00000581198 598 ntTSL 3 BASIC7.06□□□□□ -1.28
PCDH1Q08174 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC7.06□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms