Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 MTND2P40-201ENST00000436718 841 ntBASIC5.41□□□□□ -1.54
SCN1BQ07699 CCNJP1-201ENST00000450600 1149 ntBASIC5.41□□□□□ -1.54
SCN1BQ07699 RAB28P2-201ENST00000454299 641 ntBASIC5.41□□□□□ -1.54
SCN1BQ07699 AL133244.1-201ENST00000456007 258 ntBASIC5.41□□□□□ -1.54
SCN1BQ07699 AL354872.1-201ENST00000456361 967 ntBASIC5.41□□□□□ -1.54
SCN1BQ07699 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC5.41□□□□□ -1.54
SCN1BQ07699 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC5.41□□□□□ -1.54
SCN1BQ07699 RPS3AP49-201ENST00000472161 790 ntBASIC5.41□□□□□ -1.54
SCN1BQ07699 AC079080.1-201ENST00000479841 822 ntBASIC5.41□□□□□ -1.54
SCN1BQ07699 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC5.41□□□□□ -1.54
SCN1BQ07699 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SCN1BQ07699 TOMM22P4-201ENST00000511318 336 ntBASIC5.41□□□□□ -1.54
SCN1BQ07699 MTHFD2P4-201ENST00000515074 1025 ntBASIC5.41□□□□□ -1.54
SCN1BQ07699 SCARNA5-201ENST00000516201 276 ntBASIC5.41□□□□□ -1.54
SCN1BQ07699 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC5.41□□□□□ -1.54
SCN1BQ07699 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC5.41□□□□□ -1.54
SCN1BQ07699 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC5.41□□□□□ -1.54
SCN1BQ07699 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC5.41□□□□□ -1.54
SCN1BQ07699 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC5.41□□□□□ -1.54
SCN1BQ07699 AC005519.1-201ENST00000554490 601 ntBASIC5.41□□□□□ -1.54
SCN1BQ07699 CHEK2P2-201ENST00000554701 672 ntBASIC5.41□□□□□ -1.54
SCN1BQ07699 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.41□□□□□ -1.54
SCN1BQ07699 OR4C49P-201ENST00000563891 900 ntBASIC5.41□□□□□ -1.54
SCN1BQ07699 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC5.41□□□□□ -1.54
SCN1BQ07699 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SCN1BQ07699 NPIPB1P-202ENST00000588786 828 ntBASIC5.41□□□□□ -1.54
SCN1BQ07699 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC5.41□□□□□ -1.54
SCN1BQ07699 MTCO2P22-201ENST00000603246 681 ntBASIC5.41□□□□□ -1.54
SCN1BQ07699 AL078624.2-201ENST00000605063 554 ntBASIC5.41□□□□□ -1.54
SCN1BQ07699 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC5.41□□□□□ -1.54
SCN1BQ07699 AC005618.4-201ENST00000625053 554 ntBASIC5.41□□□□□ -1.54
SCN1BQ07699 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
SCN1BQ07699 SMG1P7-201ENST00000565246 2704 ntBASIC5.41□□□□□ -1.54
SCN1BQ07699 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
SCN1BQ07699 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
SCN1BQ07699 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SCN1BQ07699 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.41□□□□□ -1.54
SCN1BQ07699 UGT2B26P-201ENST00000508672 1613 ntBASIC5.41□□□□□ -1.54
SCN1BQ07699 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.41□□□□□ -1.54
SCN1BQ07699 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.41□□□□□ -1.54
SCN1BQ07699 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
SCN1BQ07699 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SCN1BQ07699 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
SCN1BQ07699 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.4□□□□□ -1.54
SCN1BQ07699 AC003973.3-201ENST00000624863 2822 ntBASIC5.4□□□□□ -1.54
SCN1BQ07699 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
SCN1BQ07699 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.4□□□□□ -1.54
SCN1BQ07699 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC5.4□□□□□ -1.54
SCN1BQ07699 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SCN1BQ07699 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SCN1BQ07699 NPM1P10-201ENST00000398310 865 ntBASIC5.4□□□□□ -1.54
SCN1BQ07699 RPL12P23-201ENST00000405880 490 ntBASIC5.4□□□□□ -1.54
SCN1BQ07699 AL353133.1-201ENST00000407695 401 ntBASIC5.4□□□□□ -1.54
SCN1BQ07699 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC5.4□□□□□ -1.54
SCN1BQ07699 NENFP1-201ENST00000419476 466 ntBASIC5.4□□□□□ -1.54
SCN1BQ07699 AC006509.1-201ENST00000420788 634 ntBASIC5.4□□□□□ -1.54
SCN1BQ07699 AL157884.1-201ENST00000424561 454 ntBASIC5.4□□□□□ -1.54
SCN1BQ07699 AC113412.1-201ENST00000425840 504 ntBASIC5.4□□□□□ -1.54
SCN1BQ07699 PA2G4P6-201ENST00000438325 1197 ntBASIC5.4□□□□□ -1.54
SCN1BQ07699 SCAND3P1-201ENST00000439854 1060 ntBASIC5.4□□□□□ -1.54
SCN1BQ07699 RPL5P25-201ENST00000441148 775 ntBASIC5.4□□□□□ -1.54
SCN1BQ07699 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC5.4□□□□□ -1.54
SCN1BQ07699 Z99127.2-201ENST00000441426 334 ntBASIC5.4□□□□□ -1.54
SCN1BQ07699 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.4□□□□□ -1.54
SCN1BQ07699 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC5.4□□□□□ -1.54
SCN1BQ07699 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.4□□□□□ -1.54
SCN1BQ07699 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.4□□□□□ -1.54
SCN1BQ07699 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC5.4□□□□□ -1.54
SCN1BQ07699 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
SCN1BQ07699 AC093325.1-201ENST00000508378 326 ntBASIC5.4□□□□□ -1.54
SCN1BQ07699 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC5.4□□□□□ -1.54
SCN1BQ07699 FABP5P6-201ENST00000510588 409 ntBASIC5.4□□□□□ -1.54
SCN1BQ07699 ACTR6P1-201ENST00000514311 1104 ntBASIC5.4□□□□□ -1.54
SCN1BQ07699 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC5.4□□□□□ -1.54
SCN1BQ07699 OR6M2P-201ENST00000529831 871 ntBASIC5.4□□□□□ -1.54
SCN1BQ07699 AP004607.5-201ENST00000532034 217 ntBASIC5.4□□□□□ -1.54
SCN1BQ07699 RPA2P3-201ENST00000533268 770 ntBASIC5.4□□□□□ -1.54
SCN1BQ07699 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC5.4□□□□□ -1.54
SCN1BQ07699 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC5.4□□□□□ -1.54
SCN1BQ07699 ZNF322P1-201ENST00000568013 1209 ntBASIC5.4□□□□□ -1.54
SCN1BQ07699 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC5.4□□□□□ -1.54
SCN1BQ07699 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.4□□□□□ -1.54
SCN1BQ07699 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.4□□□□□ -1.54
SCN1BQ07699 RPL29P33-201ENST00000587474 316 ntBASIC5.4□□□□□ -1.54
SCN1BQ07699 AC114477.1-201ENST00000605097 605 ntBASIC5.4□□□□□ -1.54
SCN1BQ07699 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC5.4□□□□□ -1.54
SCN1BQ07699 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC5.4□□□□□ -1.54
SCN1BQ07699 LINC00216-201ENST00000623548 1126 ntBASIC5.4□□□□□ -1.54
SCN1BQ07699 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC5.4□□□□□ -1.54
SCN1BQ07699 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
SCN1BQ07699 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.4□□□□□ -1.55
SCN1BQ07699 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.4□□□□□ -1.55
SCN1BQ07699 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
SCN1BQ07699 HSPA8P17-201ENST00000427029 1382 ntBASIC5.4□□□□□ -1.55
SCN1BQ07699 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC5.4□□□□□ -1.55
SCN1BQ07699 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.4□□□□□ -1.55
SCN1BQ07699 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.39□□□□□ -1.55
SCN1BQ07699 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SCN1BQ07699 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC5.39□□□□□ -1.55
SCN1BQ07699 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms