Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC4.79□□□□□ -1.64
SSBP1Q04837 RPL7P56-201ENST00000429441 717 ntBASIC4.79□□□□□ -1.64
SSBP1Q04837 AC090804.1-201ENST00000448870 490 ntBASIC4.79□□□□□ -1.64
SSBP1Q04837 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC4.79□□□□□ -1.64
SSBP1Q04837 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC4.79□□□□□ -1.64
SSBP1Q04837 UBFD1P1-201ENST00000473259 814 ntBASIC4.79□□□□□ -1.64
SSBP1Q04837 AC105391.1-201ENST00000503155 1045 ntBASIC4.79□□□□□ -1.64
SSBP1Q04837 EIF3KP3-201ENST00000514461 639 ntBASIC4.79□□□□□ -1.64
SSBP1Q04837 AC083973.1-201ENST00000523459 590 ntTSL 2 BASIC4.79□□□□□ -1.64
SSBP1Q04837 AP001994.1-201ENST00000527539 826 ntBASIC4.79□□□□□ -1.64
SSBP1Q04837 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC4.79□□□□□ -1.64
SSBP1Q04837 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC4.79□□□□□ -1.64
SSBP1Q04837 CLK4-214ENST00000611575 1206 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SSBP1Q04837 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC4.79□□□□□ -1.64
SSBP1Q04837 AL121985.3-201ENST00000620690 523 ntBASIC4.79□□□□□ -1.64
SSBP1Q04837 MIR6503-201ENST00000622884 86 ntBASIC4.79□□□□□ -1.64
SSBP1Q04837 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC4.79□□□□□ -1.64
SSBP1Q04837 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
SSBP1Q04837 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SSBP1Q04837 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SSBP1Q04837 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC4.79□□□□□ -1.64
SSBP1Q04837 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC4.79□□□□□ -1.64
SSBP1Q04837 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
SSBP1Q04837 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
SSBP1Q04837 HSPA8P14-201ENST00000552265 1805 ntBASIC4.79□□□□□ -1.64
SSBP1Q04837 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
SSBP1Q04837 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SSBP1Q04837 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
SSBP1Q04837 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SSBP1Q04837 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
SSBP1Q04837 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SSBP1Q04837 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
SSBP1Q04837 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC4.78□□□□□ -1.64
SSBP1Q04837 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SSBP1Q04837 ADAM5-202ENST00000399789 1942 ntBASIC4.78□□□□□ -1.64
SSBP1Q04837 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SSBP1Q04837 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC4.78□□□□□ -1.64
SSBP1Q04837 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.78□□□□□ -1.64
SSBP1Q04837 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SSBP1Q04837 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC4.78□□□□□ -1.64
SSBP1Q04837 AC217777.1-201ENST00000570034 1471 ntBASIC4.78□□□□□ -1.64
SSBP1Q04837 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
SSBP1Q04837 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SSBP1Q04837 RN7SKP77-201ENST00000363261 353 ntBASIC4.78□□□□□ -1.64
SSBP1Q04837 ZNF343-203ENST00000381253 819 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SSBP1Q04837 SNORD56.6-201ENST00000384569 71 ntBASIC4.78□□□□□ -1.64
SSBP1Q04837 YWHAZP4-201ENST00000392459 708 ntBASIC4.78□□□□□ -1.64
SSBP1Q04837 RPL21P67-201ENST00000402896 478 ntBASIC4.78□□□□□ -1.64
SSBP1Q04837 RPA3-204ENST00000406109 434 ntTSL 3 BASIC4.78□□□□□ -1.64
SSBP1Q04837 CTSL3P-202ENST00000412179 788 ntBASIC4.78□□□□□ -1.64
SSBP1Q04837 AL139135.1-201ENST00000412675 209 ntBASIC4.78□□□□□ -1.64
SSBP1Q04837 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC4.78□□□□□ -1.64
SSBP1Q04837 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SSBP1Q04837 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SSBP1Q04837 KATNBL1P2-201ENST00000433311 835 ntBASIC4.78□□□□□ -1.64
SSBP1Q04837 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC4.78□□□□□ -1.64
SSBP1Q04837 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SSBP1Q04837 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SSBP1Q04837 AL596266.1-201ENST00000448132 400 ntBASIC4.78□□□□□ -1.64
SSBP1Q04837 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC4.78□□□□□ -1.64
SSBP1Q04837 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC4.78□□□□□ -1.64
SSBP1Q04837 AL445991.1-201ENST00000450381 475 ntBASIC4.78□□□□□ -1.64
SSBP1Q04837 LINC01006-207ENST00000458645 738 ntTSL 4 BASIC4.78□□□□□ -1.64
SSBP1Q04837 RN7SL655P-201ENST00000486087 298 ntBASIC4.78□□□□□ -1.64
SSBP1Q04837 RPS24P16-201ENST00000497294 392 ntBASIC4.78□□□□□ -1.64
SSBP1Q04837 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC4.78□□□□□ -1.64
SSBP1Q04837 AC114324.2-202ENST00000503812 134 ntBASIC4.78□□□□□ -1.64
SSBP1Q04837 MYL12BP2-201ENST00000503948 512 ntBASIC4.78□□□□□ -1.64
SSBP1Q04837 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC4.78□□□□□ -1.64
SSBP1Q04837 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC4.78□□□□□ -1.64
SSBP1Q04837 RNU6-513P-201ENST00000516104 104 ntBASIC4.78□□□□□ -1.64
SSBP1Q04837 TMEM97P2-201ENST00000517841 403 ntBASIC4.78□□□□□ -1.64
SSBP1Q04837 CDC42P3-201ENST00000518493 633 ntBASIC4.78□□□□□ -1.64
SSBP1Q04837 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC4.78□□□□□ -1.64
SSBP1Q04837 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SSBP1Q04837 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC4.78□□□□□ -1.64
SSBP1Q04837 AC006349.1-201ENST00000555526 235 ntBASIC4.78□□□□□ -1.64
SSBP1Q04837 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC4.78□□□□□ -1.64
SSBP1Q04837 ARL17A-205ENST00000573185 581 ntAPPRIS ALT2 TSL 3 BASIC4.78□□□□□ -1.64
SSBP1Q04837 ARL17B-206ENST00000575698 581 ntTSL 3 BASIC4.78□□□□□ -1.64
SSBP1Q04837 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC4.78□□□□□ -1.64
SSBP1Q04837 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC4.78□□□□□ -1.64
SSBP1Q04837 SMIM12P1-201ENST00000603004 274 ntBASIC4.78□□□□□ -1.64
SSBP1Q04837 AL353807.4-201ENST00000604995 257 ntBASIC4.78□□□□□ -1.64
SSBP1Q04837 AL136131.3-201ENST00000607600 188 ntBASIC4.78□□□□□ -1.64
SSBP1Q04837 AL021918.2-201ENST00000613415 194 ntBASIC4.78□□□□□ -1.64
SSBP1Q04837 RFPL4AP6-201ENST00000616792 846 ntBASIC4.78□□□□□ -1.64
SSBP1Q04837 MIR6849-201ENST00000618543 69 ntBASIC4.78□□□□□ -1.64
SSBP1Q04837 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
SSBP1Q04837 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SSBP1Q04837 AC100757.1-201ENST00000616872 1835 ntBASIC4.78□□□□□ -1.64
SSBP1Q04837 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
SSBP1Q04837 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC4.78□□□□□ -1.64
SSBP1Q04837 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
SSBP1Q04837 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.78□□□□□ -1.64
SSBP1Q04837 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC4.78□□□□□ -1.64
SSBP1Q04837 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SSBP1Q04837 RGS2-201ENST00000235382 1354 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SSBP1Q04837 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC4.78□□□□□ -1.64
SSBP1Q04837 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms