Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.55□□□□□ -1.52
HMGCS1Q01581 CYCSP38-201ENST00000559840 322 ntBASIC5.55□□□□□ -1.52
HMGCS1Q01581 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HMGCS1Q01581 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
HMGCS1Q01581 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.55□□□□□ -1.52
HMGCS1Q01581 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC5.55□□□□□ -1.52
HMGCS1Q01581 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC5.55□□□□□ -1.52
HMGCS1Q01581 AL499605.1-201ENST00000604628 403 ntBASIC5.55□□□□□ -1.52
HMGCS1Q01581 AC009237.12-201ENST00000604755 742 ntBASIC5.55□□□□□ -1.52
HMGCS1Q01581 AL353729.2-201ENST00000605859 1249 ntBASIC5.55□□□□□ -1.52
HMGCS1Q01581 AL136131.3-201ENST00000607600 188 ntBASIC5.55□□□□□ -1.52
HMGCS1Q01581 AC245014.3-201ENST00000618589 347 ntBASIC5.55□□□□□ -1.52
HMGCS1Q01581 AL035661.1-201ENST00000620459 1144 ntBASIC5.55□□□□□ -1.52
HMGCS1Q01581 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.55□□□□□ -1.52
HMGCS1Q01581 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.55□□□□□ -1.52
HMGCS1Q01581 AC232271.1-201ENST00000602455 2715 ntBASIC5.55□□□□□ -1.52
HMGCS1Q01581 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
HMGCS1Q01581 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HMGCS1Q01581 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
HMGCS1Q01581 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HMGCS1Q01581 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HMGCS1Q01581 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HMGCS1Q01581 CAP1P2-201ENST00000417455 1409 ntBASIC5.55□□□□□ -1.52
HMGCS1Q01581 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HMGCS1Q01581 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HMGCS1Q01581 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.55□□□□□ -1.52
HMGCS1Q01581 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
HMGCS1Q01581 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.55□□□□□ -1.52
HMGCS1Q01581 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HMGCS1Q01581 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
HMGCS1Q01581 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HMGCS1Q01581 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
HMGCS1Q01581 AC117409.1-201ENST00000470499 1310 ntBASIC5.54□□□□□ -1.52
HMGCS1Q01581 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.54□□□□□ -1.52
HMGCS1Q01581 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC5.54□□□□□ -1.52
HMGCS1Q01581 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HMGCS1Q01581 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
HMGCS1Q01581 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HMGCS1Q01581 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
HMGCS1Q01581 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC5.54□□□□□ -1.52
HMGCS1Q01581 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC5.54□□□□□ -1.52
HMGCS1Q01581 VN1R21P-201ENST00000426703 765 ntBASIC5.54□□□□□ -1.52
HMGCS1Q01581 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC5.54□□□□□ -1.52
HMGCS1Q01581 SUMO2P8-201ENST00000434672 286 ntBASIC5.54□□□□□ -1.52
HMGCS1Q01581 AC110602.1-201ENST00000437414 318 ntBASIC5.54□□□□□ -1.52
HMGCS1Q01581 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
HMGCS1Q01581 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HMGCS1Q01581 DUTP1-201ENST00000493631 470 ntBASIC5.54□□□□□ -1.52
HMGCS1Q01581 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.54□□□□□ -1.52
HMGCS1Q01581 LSM3P4-201ENST00000502948 309 ntBASIC5.54□□□□□ -1.52
HMGCS1Q01581 AC021146.10-201ENST00000515628 706 ntBASIC5.54□□□□□ -1.52
HMGCS1Q01581 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.54□□□□□ -1.52
HMGCS1Q01581 WBP1LP3-201ENST00000523033 208 ntBASIC5.54□□□□□ -1.52
HMGCS1Q01581 CASP5-209ENST00000531367 879 ntTSL 5 BASIC5.54□□□□□ -1.52
HMGCS1Q01581 AC006530.1-201ENST00000555980 571 ntBASIC5.54□□□□□ -1.52
HMGCS1Q01581 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC5.54□□□□□ -1.52
HMGCS1Q01581 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.54□□□□□ -1.52
HMGCS1Q01581 MIR6071-201ENST00000616741 78 ntBASIC5.54□□□□□ -1.52
HMGCS1Q01581 AC025262.3-201ENST00000623666 360 ntBASIC5.54□□□□□ -1.52
HMGCS1Q01581 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HMGCS1Q01581 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.54□□□□□ -1.52
HMGCS1Q01581 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HMGCS1Q01581 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.54□□□□□ -1.52
HMGCS1Q01581 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.54□□□□□ -1.52
HMGCS1Q01581 AC027088.4-201ENST00000611559 1947 ntBASIC5.54□□□□□ -1.52
HMGCS1Q01581 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HMGCS1Q01581 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HMGCS1Q01581 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
HMGCS1Q01581 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HMGCS1Q01581 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
HMGCS1Q01581 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.54□□□□□ -1.52
HMGCS1Q01581 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HMGCS1Q01581 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HMGCS1Q01581 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HMGCS1Q01581 AC140134.1-201ENST00000511830 3544 ntBASIC5.53□□□□□ -1.52
HMGCS1Q01581 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HMGCS1Q01581 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
HMGCS1Q01581 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.53□□□□□ -1.52
HMGCS1Q01581 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC5.53□□□□□ -1.52
HMGCS1Q01581 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HMGCS1Q01581 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.53□□□□□ -1.52
HMGCS1Q01581 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HMGCS1Q01581 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
HMGCS1Q01581 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HMGCS1Q01581 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.53□□□□□ -1.52
HMGCS1Q01581 RNU1-136P-201ENST00000384181 164 ntBASIC5.53□□□□□ -1.52
HMGCS1Q01581 RNU11-201ENST00000387069 134 ntBASIC5.53□□□□□ -1.52
HMGCS1Q01581 OR7E156P-201ENST00000400303 464 ntBASIC5.53□□□□□ -1.52
HMGCS1Q01581 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
HMGCS1Q01581 AL357752.1-201ENST00000412817 349 ntBASIC5.53□□□□□ -1.52
HMGCS1Q01581 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HMGCS1Q01581 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.53□□□□□ -1.52
HMGCS1Q01581 ATP5A1P8-201ENST00000423669 1291 ntBASIC5.53□□□□□ -1.52
HMGCS1Q01581 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.53□□□□□ -1.52
HMGCS1Q01581 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC5.53□□□□□ -1.52
HMGCS1Q01581 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HMGCS1Q01581 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.53□□□□□ -1.52
HMGCS1Q01581 ATP6V1E1P1-201ENST00000439215 681 ntBASIC5.53□□□□□ -1.52
HMGCS1Q01581 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.53□□□□□ -1.52
HMGCS1Q01581 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 186.2 ms