Protein–RNA interactions for Protein: P78539

SRPX, Sushi repeat-containing protein SRPX, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPXP78539 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SRPXP78539 SLC2A3P2-201ENST00000331747 1480 ntBASIC4.84□□□□□ -1.63
SRPXP78539 TCP11X1-202ENST00000622971 1372 ntBASIC4.84□□□□□ -1.63
SRPXP78539 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC4.84□□□□□ -1.63
SRPXP78539 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC4.84□□□□□ -1.63
SRPXP78539 RNA5SP485-201ENST00000365053 119 ntBASIC4.84□□□□□ -1.63
SRPXP78539 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC4.84□□□□□ -1.63
SRPXP78539 SNORA70.6-201ENST00000383934 134 ntBASIC4.84□□□□□ -1.63
SRPXP78539 MT-RNR1-201ENST00000389680 954 ntBASIC4.84□□□□□ -1.63
SRPXP78539 RNA5SP155-201ENST00000411154 129 ntBASIC4.84□□□□□ -1.63
SRPXP78539 AL096829.1-201ENST00000413677 457 ntBASIC4.84□□□□□ -1.63
SRPXP78539 MTND4LP21-201ENST00000415303 295 ntBASIC4.84□□□□□ -1.63
SRPXP78539 AC079809.1-201ENST00000415468 276 ntBASIC4.84□□□□□ -1.63
SRPXP78539 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC4.84□□□□□ -1.63
SRPXP78539 AL360013.1-201ENST00000419031 858 ntBASIC4.84□□□□□ -1.63
SRPXP78539 BMS1P11-201ENST00000442351 885 ntBASIC4.84□□□□□ -1.63
SRPXP78539 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC4.84□□□□□ -1.63
SRPXP78539 C1DP3-201ENST00000455013 423 ntBASIC4.84□□□□□ -1.63
SRPXP78539 RBMY2EP-202ENST00000456360 940 ntBASIC4.84□□□□□ -1.63
SRPXP78539 BMS1P9-201ENST00000457640 885 ntBASIC4.84□□□□□ -1.63
SRPXP78539 SNORD125-201ENST00000459538 96 ntBASIC4.84□□□□□ -1.63
SRPXP78539 RPS10P28-201ENST00000480396 498 ntBASIC4.84□□□□□ -1.63
SRPXP78539 RN7SL350P-201ENST00000492591 299 ntBASIC4.84□□□□□ -1.63
SRPXP78539 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC4.84□□□□□ -1.63
SRPXP78539 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC4.84□□□□□ -1.63
SRPXP78539 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC4.84□□□□□ -1.63
SRPXP78539 RNU6-1334P-201ENST00000516032 105 ntBASIC4.84□□□□□ -1.63
SRPXP78539 RNA5SP434-201ENST00000516647 121 ntBASIC4.84□□□□□ -1.63
SRPXP78539 MIR2117-201ENST00000516780 80 ntBASIC4.84□□□□□ -1.63
SRPXP78539 ODF1-202ENST00000518835 368 ntTSL 3 BASIC4.84□□□□□ -1.63
SRPXP78539 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC4.84□□□□□ -1.63
SRPXP78539 AC130366.1-201ENST00000526505 1192 ntBASIC4.84□□□□□ -1.63
SRPXP78539 AP003168.1-201ENST00000530091 307 ntBASIC4.84□□□□□ -1.63
SRPXP78539 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC4.84□□□□□ -1.63
SRPXP78539 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC4.84□□□□□ -1.63
SRPXP78539 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC4.84□□□□□ -1.63
SRPXP78539 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC4.84□□□□□ -1.63
SRPXP78539 OR4C49P-201ENST00000563891 900 ntBASIC4.84□□□□□ -1.63
SRPXP78539 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC4.84□□□□□ -1.63
SRPXP78539 PPIAP14-201ENST00000577627 496 ntBASIC4.84□□□□□ -1.63
SRPXP78539 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC4.84□□□□□ -1.63
SRPXP78539 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC4.84□□□□□ -1.63
SRPXP78539 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC4.84□□□□□ -1.63
SRPXP78539 KATNBL1P1-201ENST00000605192 748 ntBASIC4.84□□□□□ -1.63
SRPXP78539 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC4.84□□□□□ -1.63
SRPXP78539 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC4.84□□□□□ -1.63
SRPXP78539 AC007620.3-201ENST00000608131 497 ntBASIC4.84□□□□□ -1.63
SRPXP78539 STARD13-AS-224ENST00000608496 787 ntTSL 5 BASIC4.84□□□□□ -1.63
SRPXP78539 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC4.84□□□□□ -1.63
SRPXP78539 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.63
SRPXP78539 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC4.84□□□□□ -1.63
SRPXP78539 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SRPXP78539 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC4.84□□□□□ -1.64
SRPXP78539 TOPORSLP1-201ENST00000467693 2102 ntBASIC4.84□□□□□ -1.64
SRPXP78539 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
SRPXP78539 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
SRPXP78539 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC4.84□□□□□ -1.64
SRPXP78539 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
SRPXP78539 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
SRPXP78539 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC4.84□□□□□ -1.64
SRPXP78539 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SRPXP78539 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SRPXP78539 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SRPXP78539 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
SRPXP78539 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SRPXP78539 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SRPXP78539 CASC19-246ENST00000641625 1606 ntBASIC4.83□□□□□ -1.64
SRPXP78539 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SRPXP78539 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC4.83□□□□□ -1.64
SRPXP78539 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC4.83□□□□□ -1.64
SRPXP78539 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.83□□□□□ -1.64
SRPXP78539 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SRPXP78539 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SRPXP78539 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SRPXP78539 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SRPXP78539 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.83□□□□□ -1.64
SRPXP78539 RBMY1HP-201ENST00000382759 1389 ntBASIC4.83□□□□□ -1.64
SRPXP78539 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SRPXP78539 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SRPXP78539 FBXL21-201ENST00000297158 1305 ntBASIC4.83□□□□□ -1.64
SRPXP78539 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
SRPXP78539 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
SRPXP78539 SNORA7A-201ENST00000384765 139 ntBASIC4.83□□□□□ -1.64
SRPXP78539 SNORD94-201ENST00000386037 137 ntBASIC4.83□□□□□ -1.64
SRPXP78539 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
SRPXP78539 RNA5SP91-201ENST00000390902 119 ntBASIC4.83□□□□□ -1.64
SRPXP78539 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC4.83□□□□□ -1.64
SRPXP78539 RNU6-564P-201ENST00000410983 104 ntBASIC4.83□□□□□ -1.64
SRPXP78539 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC4.83□□□□□ -1.64
SRPXP78539 RPL35AP31-201ENST00000418340 337 ntBASIC4.83□□□□□ -1.64
SRPXP78539 ELOBP4-201ENST00000423418 296 ntBASIC4.83□□□□□ -1.64
SRPXP78539 OSTCP4-201ENST00000424397 449 ntBASIC4.83□□□□□ -1.64
SRPXP78539 AC019185.3-201ENST00000438805 323 ntBASIC4.83□□□□□ -1.64
SRPXP78539 AC114878.1-201ENST00000441166 358 ntBASIC4.83□□□□□ -1.64
SRPXP78539 CXCR2P1-202ENST00000443392 1074 ntBASIC4.83□□□□□ -1.64
SRPXP78539 TRIM60P16-201ENST00000444048 694 ntBASIC4.83□□□□□ -1.64
SRPXP78539 AC017099.1-201ENST00000448261 1028 ntBASIC4.83□□□□□ -1.64
SRPXP78539 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC4.83□□□□□ -1.64
SRPXP78539 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC4.83□□□□□ -1.64
SRPXP78539 PSAT1P4-201ENST00000466500 526 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms