Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC6.41□□□□□ -1.38
TPM4P67936 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
TPM4P67936 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
TPM4P67936 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
TPM4P67936 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC6.41□□□□□ -1.38
TPM4P67936 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
TPM4P67936 U3.28-201ENST00000391249 210 ntBASIC6.41□□□□□ -1.38
TPM4P67936 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC6.41□□□□□ -1.38
TPM4P67936 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC6.41□□□□□ -1.38
TPM4P67936 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC6.41□□□□□ -1.38
TPM4P67936 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
TPM4P67936 RPEP4-201ENST00000437636 602 ntBASIC6.41□□□□□ -1.38
TPM4P67936 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC6.41□□□□□ -1.38
TPM4P67936 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC6.41□□□□□ -1.38
TPM4P67936 RPS23P2-201ENST00000463671 415 ntBASIC6.41□□□□□ -1.38
TPM4P67936 RPL12P24-201ENST00000474907 486 ntBASIC6.41□□□□□ -1.38
TPM4P67936 AC096576.2-201ENST00000511835 948 ntTSL 3 BASIC6.41□□□□□ -1.38
TPM4P67936 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC6.41□□□□□ -1.38
TPM4P67936 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC6.41□□□□□ -1.38
TPM4P67936 AC036111.2-201ENST00000533247 901 ntBASIC6.41□□□□□ -1.38
TPM4P67936 AC137627.1-201ENST00000545761 289 ntBASIC6.41□□□□□ -1.38
TPM4P67936 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
TPM4P67936 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC6.41□□□□□ -1.38
TPM4P67936 PACRG-210ENST00000611387 279 ntTSL 5 BASIC6.41□□□□□ -1.38
TPM4P67936 GAPDHP41-201ENST00000613707 975 ntBASIC6.41□□□□□ -1.38
TPM4P67936 AL512652.1-201ENST00000619006 500 ntBASIC6.41□□□□□ -1.38
TPM4P67936 AC089999.3-201ENST00000622440 577 ntBASIC6.41□□□□□ -1.38
TPM4P67936 AC021766.1-201ENST00000624404 741 ntBASIC6.41□□□□□ -1.38
TPM4P67936 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC6.41□□□□□ -1.38
TPM4P67936 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
TPM4P67936 AC003985.2-201ENST00000562268 1669 ntBASIC6.41□□□□□ -1.38
TPM4P67936 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC6.41□□□□□ -1.38
TPM4P67936 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC6.41□□□□□ -1.38
TPM4P67936 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
TPM4P67936 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
TPM4P67936 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
TPM4P67936 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
TPM4P67936 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.38
TPM4P67936 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
TPM4P67936 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC6.4□□□□□ -1.38
TPM4P67936 OR4F13P-202ENST00000560066 2054 ntBASIC6.4□□□□□ -1.38
TPM4P67936 MFSD8-219ENST00000641228 2559 ntBASIC6.4□□□□□ -1.38
TPM4P67936 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC6.4□□□□□ -1.38
TPM4P67936 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
TPM4P67936 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC6.4□□□□□ -1.38
TPM4P67936 SELENOWP1-201ENST00000322792 252 ntBASIC6.4□□□□□ -1.38
TPM4P67936 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.38
TPM4P67936 SNORA64.3-201ENST00000365647 134 ntBASIC6.4□□□□□ -1.38
TPM4P67936 SMPX-201ENST00000379494 938 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
TPM4P67936 ZNF37CP-201ENST00000406795 241 ntBASIC6.4□□□□□ -1.38
TPM4P67936 GPS2P1-201ENST00000411761 986 ntBASIC6.4□□□□□ -1.38
TPM4P67936 MEAF6P1-201ENST00000416092 327 ntBASIC6.4□□□□□ -1.38
TPM4P67936 RNF10P1-201ENST00000418589 369 ntBASIC6.4□□□□□ -1.38
TPM4P67936 AL121878.1-201ENST00000418638 859 ntBASIC6.4□□□□□ -1.38
TPM4P67936 SETP9-201ENST00000423837 832 ntBASIC6.4□□□□□ -1.38
TPM4P67936 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC6.4□□□□□ -1.38
TPM4P67936 BMS1P10-201ENST00000443754 1120 ntBASIC6.4□□□□□ -1.38
TPM4P67936 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC6.4□□□□□ -1.38
TPM4P67936 OR7E22P-201ENST00000478335 1035 ntBASIC6.4□□□□□ -1.38
TPM4P67936 RPSAP51-201ENST00000497462 645 ntBASIC6.4□□□□□ -1.38
TPM4P67936 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
TPM4P67936 RNU4ATAC18P-201ENST00000516179 126 ntBASIC6.4□□□□□ -1.38
TPM4P67936 RNA5SP230-201ENST00000517039 122 ntBASIC6.4□□□□□ -1.38
TPM4P67936 FAU-203ENST00000525297 355 ntTSL 5 BASIC6.4□□□□□ -1.38
TPM4P67936 GTF2IP11-201ENST00000526931 420 ntBASIC6.4□□□□□ -1.38
TPM4P67936 AP004607.5-201ENST00000532034 217 ntBASIC6.4□□□□□ -1.38
TPM4P67936 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC6.4□□□□□ -1.38
TPM4P67936 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC6.4□□□□□ -1.38
TPM4P67936 AC006363.1-201ENST00000603806 463 ntBASIC6.4□□□□□ -1.38
TPM4P67936 AC011891.2-201ENST00000604949 397 ntBASIC6.4□□□□□ -1.38
TPM4P67936 AL139124.1-201ENST00000609123 421 ntBASIC6.4□□□□□ -1.38
TPM4P67936 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
TPM4P67936 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
TPM4P67936 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.39
TPM4P67936 PHACTR2P1-201ENST00000605639 1414 ntBASIC6.4□□□□□ -1.39
TPM4P67936 ELOC-205ENST00000520210 1451 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
TPM4P67936 AP001284.1-201ENST00000528393 2118 ntBASIC6.4□□□□□ -1.39
TPM4P67936 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
TPM4P67936 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC6.4□□□□□ -1.39
TPM4P67936 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
TPM4P67936 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
TPM4P67936 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
TPM4P67936 HSPD1P7-201ENST00000447985 1686 ntBASIC6.39□□□□□ -1.39
TPM4P67936 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
TPM4P67936 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC6.39□□□□□ -1.39
TPM4P67936 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
TPM4P67936 DYDC2-201ENST00000256039 1842 ntAPPRIS P3 TSL 2 BASIC6.39□□□□□ -1.39
TPM4P67936 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
TPM4P67936 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
TPM4P67936 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC6.39□□□□□ -1.39
TPM4P67936 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
TPM4P67936 AL121886.1-201ENST00000358609 435 ntBASIC6.39□□□□□ -1.39
TPM4P67936 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
TPM4P67936 ARSFP1-201ENST00000398758 477 ntBASIC6.39□□□□□ -1.39
TPM4P67936 REREP1Y-201ENST00000422655 198 ntBASIC6.39□□□□□ -1.39
TPM4P67936 REREP2Y-201ENST00000439103 200 ntBASIC6.39□□□□□ -1.39
TPM4P67936 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
TPM4P67936 H3F3AP5-201ENST00000475267 429 ntBASIC6.39□□□□□ -1.39
TPM4P67936 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC6.39□□□□□ -1.39
TPM4P67936 AC108103.1-201ENST00000511286 446 ntBASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms