Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC4.84□□□□□ -1.64
SPCS3P61009 AC004076.2-201ENST00000620532 3323 ntBASIC4.84□□□□□ -1.64
SPCS3P61009 DLD-205ENST00000440410 1993 ntTSL 2 BASIC4.84□□□□□ -1.64
SPCS3P61009 AC093775.1-201ENST00000624154 1868 ntBASIC4.83□□□□□ -1.64
SPCS3P61009 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
SPCS3P61009 AC114774.1-201ENST00000507410 1770 ntBASIC4.83□□□□□ -1.64
SPCS3P61009 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SPCS3P61009 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SPCS3P61009 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC4.83□□□□□ -1.64
SPCS3P61009 CASC19-246ENST00000641625 1606 ntBASIC4.83□□□□□ -1.64
SPCS3P61009 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SPCS3P61009 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.83□□□□□ -1.64
SPCS3P61009 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC4.83□□□□□ -1.64
SPCS3P61009 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SPCS3P61009 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SPCS3P61009 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SPCS3P61009 AC130304.1-201ENST00000622942 2385 ntBASIC4.83□□□□□ -1.64
SPCS3P61009 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SPCS3P61009 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC4.83□□□□□ -1.64
SPCS3P61009 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SPCS3P61009 KRTAP19-6-201ENST00000334046 330 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
SPCS3P61009 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SPCS3P61009 MIR138-2-201ENST00000384916 84 ntBASIC4.83□□□□□ -1.64
SPCS3P61009 AC003045.1-201ENST00000398779 713 ntBASIC4.83□□□□□ -1.64
SPCS3P61009 OR52N3P-201ENST00000413417 934 ntBASIC4.83□□□□□ -1.64
SPCS3P61009 OSTCP4-201ENST00000424397 449 ntBASIC4.83□□□□□ -1.64
SPCS3P61009 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC4.83□□□□□ -1.64
SPCS3P61009 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC4.83□□□□□ -1.64
SPCS3P61009 AC099670.2-201ENST00000435130 321 ntBASIC4.83□□□□□ -1.64
SPCS3P61009 AC234771.4-201ENST00000441416 730 ntBASIC4.83□□□□□ -1.64
SPCS3P61009 AL512593.1-201ENST00000444758 779 ntBASIC4.83□□□□□ -1.64
SPCS3P61009 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
SPCS3P61009 COX4I1P2-201ENST00000447446 547 ntBASIC4.83□□□□□ -1.64
SPCS3P61009 OR52I1-201ENST00000450052 1050 ntBASIC4.83□□□□□ -1.64
SPCS3P61009 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC4.83□□□□□ -1.64
SPCS3P61009 PDCL3P4-201ENST00000489621 720 ntBASIC4.83□□□□□ -1.64
SPCS3P61009 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SPCS3P61009 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC4.83□□□□□ -1.64
SPCS3P61009 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC4.83□□□□□ -1.64
SPCS3P61009 IQCH-203ENST00000512104 1000 ntTSL 2 BASIC4.83□□□□□ -1.64
SPCS3P61009 RPS27AP18-201ENST00000515536 459 ntBASIC4.83□□□□□ -1.64
SPCS3P61009 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
SPCS3P61009 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC4.83□□□□□ -1.64
SPCS3P61009 OR8Q1P-201ENST00000526467 655 ntBASIC4.83□□□□□ -1.64
SPCS3P61009 AC135983.3-201ENST00000528049 1226 ntBASIC4.83□□□□□ -1.64
SPCS3P61009 AC124891.1-201ENST00000536322 519 ntBASIC4.83□□□□□ -1.64
SPCS3P61009 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC4.83□□□□□ -1.64
SPCS3P61009 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC4.83□□□□□ -1.64
SPCS3P61009 ZNF677-211ENST00000601828 719 ntTSL 2 BASIC4.83□□□□□ -1.64
SPCS3P61009 AC036176.3-201ENST00000602456 418 ntBASIC4.83□□□□□ -1.64
SPCS3P61009 AL512430.4-201ENST00000603085 613 ntBASIC4.83□□□□□ -1.64
SPCS3P61009 AL137072.1-201ENST00000603444 466 ntBASIC4.83□□□□□ -1.64
SPCS3P61009 AP001823.1-201ENST00000604056 1003 ntBASIC4.83□□□□□ -1.64
SPCS3P61009 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC4.83□□□□□ -1.64
SPCS3P61009 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC4.83□□□□□ -1.64
SPCS3P61009 AL008582.1-201ENST00000609612 442 ntBASIC4.83□□□□□ -1.64
SPCS3P61009 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
SPCS3P61009 UGP2-232ENST00000640075 567 ntTSL 5 BASIC4.83□□□□□ -1.64
SPCS3P61009 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.83□□□□□ -1.64
SPCS3P61009 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SPCS3P61009 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SPCS3P61009 HSPA8P18-201ENST00000439846 1928 ntBASIC4.83□□□□□ -1.64
SPCS3P61009 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
SPCS3P61009 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SPCS3P61009 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC4.83□□□□□ -1.64
SPCS3P61009 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SPCS3P61009 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC4.83□□□□□ -1.64
SPCS3P61009 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SPCS3P61009 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SPCS3P61009 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
SPCS3P61009 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.83□□□□□ -1.64
SPCS3P61009 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC4.83□□□□□ -1.64
SPCS3P61009 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SPCS3P61009 ELOC-205ENST00000520210 1451 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SPCS3P61009 LEKR1-201ENST00000356539 2572 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
SPCS3P61009 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
SPCS3P61009 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SPCS3P61009 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SPCS3P61009 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.82□□□□□ -1.64
SPCS3P61009 OR10R3P-201ENST00000361688 942 ntBASIC4.82□□□□□ -1.64
SPCS3P61009 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC4.82□□□□□ -1.64
SPCS3P61009 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC4.82□□□□□ -1.64
SPCS3P61009 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC4.82□□□□□ -1.64
SPCS3P61009 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC4.82□□□□□ -1.64
SPCS3P61009 TRAV35-201ENST00000390462 330 ntBASIC4.82□□□□□ -1.64
SPCS3P61009 MIR1266-201ENST00000408125 84 ntBASIC4.82□□□□□ -1.64
SPCS3P61009 PLGLB1-202ENST00000409310 960 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SPCS3P61009 RNA5SP156-201ENST00000410250 110 ntBASIC4.82□□□□□ -1.64
SPCS3P61009 MYB-206ENST00000420123 1051 ntTSL 5 BASIC4.82□□□□□ -1.64
SPCS3P61009 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.82□□□□□ -1.64
SPCS3P61009 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC4.82□□□□□ -1.64
SPCS3P61009 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC4.82□□□□□ -1.64
SPCS3P61009 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC4.82□□□□□ -1.64
SPCS3P61009 OR6R1P-201ENST00000431838 940 ntBASIC4.82□□□□□ -1.64
SPCS3P61009 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC4.82□□□□□ -1.64
SPCS3P61009 CXCR2P1-202ENST00000443392 1074 ntBASIC4.82□□□□□ -1.64
SPCS3P61009 AP003385.3-201ENST00000472498 287 ntBASIC4.82□□□□□ -1.64
SPCS3P61009 RN7SL267P-201ENST00000485107 261 ntBASIC4.82□□□□□ -1.64
SPCS3P61009 NIP7P2-201ENST00000485801 544 ntBASIC4.82□□□□□ -1.64
SPCS3P61009 AC083795.1-201ENST00000491760 320 ntBASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms