Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 MIR6811-201ENST00000620409 58 ntBASIC6.51□□□□□ -1.37
NEK3P51956 AP001264.1-201ENST00000620602 703 ntBASIC6.51□□□□□ -1.37
NEK3P51956 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC6.51□□□□□ -1.37
NEK3P51956 AL162377.2-201ENST00000624532 337 ntBASIC6.51□□□□□ -1.37
NEK3P51956 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC6.51□□□□□ -1.37
NEK3P51956 AP000550.3-201ENST00000637734 379 ntBASIC6.51□□□□□ -1.37
NEK3P51956 CASC19-274ENST00000642018 970 ntBASIC6.51□□□□□ -1.37
NEK3P51956 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
NEK3P51956 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.51□□□□□ -1.37
NEK3P51956 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.51□□□□□ -1.37
NEK3P51956 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
NEK3P51956 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
NEK3P51956 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
NEK3P51956 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC6.5□□□□□ -1.37
NEK3P51956 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
NEK3P51956 AC007342.5-201ENST00000571340 2142 ntBASIC6.5□□□□□ -1.37
NEK3P51956 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
NEK3P51956 SMG1P7-201ENST00000565246 2704 ntBASIC6.5□□□□□ -1.37
NEK3P51956 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.5□□□□□ -1.37
NEK3P51956 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC6.5□□□□□ -1.37
NEK3P51956 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
NEK3P51956 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
NEK3P51956 AL353743.3-201ENST00000442109 1468 ntBASIC6.5□□□□□ -1.37
NEK3P51956 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
NEK3P51956 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
NEK3P51956 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
NEK3P51956 MIR1275-201ENST00000408770 80 ntBASIC6.5□□□□□ -1.37
NEK3P51956 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC6.5□□□□□ -1.37
NEK3P51956 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC6.5□□□□□ -1.37
NEK3P51956 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC6.5□□□□□ -1.37
NEK3P51956 AC099782.1-201ENST00000425889 474 ntBASIC6.5□□□□□ -1.37
NEK3P51956 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
NEK3P51956 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC6.5□□□□□ -1.37
NEK3P51956 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC6.5□□□□□ -1.37
NEK3P51956 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC6.5□□□□□ -1.37
NEK3P51956 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC6.5□□□□□ -1.37
NEK3P51956 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
NEK3P51956 OR2L9P-201ENST00000444456 913 ntBASIC6.5□□□□□ -1.37
NEK3P51956 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC6.5□□□□□ -1.37
NEK3P51956 RARRES2P3-201ENST00000457739 473 ntBASIC6.5□□□□□ -1.37
NEK3P51956 RN7SL552P-201ENST00000462094 276 ntBASIC6.5□□□□□ -1.37
NEK3P51956 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
NEK3P51956 AC128716.1-201ENST00000475129 166 ntBASIC6.5□□□□□ -1.37
NEK3P51956 GM2AP2-201ENST00000491764 562 ntBASIC6.5□□□□□ -1.37
NEK3P51956 AC093763.2-201ENST00000505334 1223 ntBASIC6.5□□□□□ -1.37
NEK3P51956 MGST2-204ENST00000506797 634 ntTSL 2 BASIC6.5□□□□□ -1.37
NEK3P51956 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC6.5□□□□□ -1.37
NEK3P51956 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC6.5□□□□□ -1.37
NEK3P51956 HMGN1P15-201ENST00000513870 295 ntBASIC6.5□□□□□ -1.37
NEK3P51956 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC6.5□□□□□ -1.37
NEK3P51956 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC6.5□□□□□ -1.37
NEK3P51956 OR4A17P-201ENST00000526032 904 ntBASIC6.5□□□□□ -1.37
NEK3P51956 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
NEK3P51956 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC6.5□□□□□ -1.37
NEK3P51956 CASP1-216ENST00000534497 825 ntTSL 5 BASIC6.5□□□□□ -1.37
NEK3P51956 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC6.5□□□□□ -1.37
NEK3P51956 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC6.5□□□□□ -1.37
NEK3P51956 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC6.5□□□□□ -1.37
NEK3P51956 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
NEK3P51956 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC6.5□□□□□ -1.37
NEK3P51956 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC6.5□□□□□ -1.37
NEK3P51956 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC6.5□□□□□ -1.37
NEK3P51956 AC024255.1-201ENST00000614376 102 ntBASIC6.5□□□□□ -1.37
NEK3P51956 MRPL57P1-201ENST00000621486 265 ntBASIC6.5□□□□□ -1.37
NEK3P51956 AL391262.2-201ENST00000622466 494 ntBASIC6.5□□□□□ -1.37
NEK3P51956 AL683826.1-201ENST00000624104 627 ntBASIC6.5□□□□□ -1.37
NEK3P51956 AC111152.1-202ENST00000635848 339 ntBASIC6.5□□□□□ -1.37
NEK3P51956 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
NEK3P51956 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC6.5□□□□□ -1.37
NEK3P51956 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC6.5□□□□□ -1.37
NEK3P51956 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
NEK3P51956 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC6.5□□□□□ -1.37
NEK3P51956 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6.5□□□□□ -1.37
NEK3P51956 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
NEK3P51956 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC6.5□□□□□ -1.37
NEK3P51956 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.5□□□□□ -1.37
NEK3P51956 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
NEK3P51956 CREM-203ENST00000344351 1625 ntTSL 2 BASIC6.5□□□□□ -1.37
NEK3P51956 AL592494.2-201ENST00000425455 1548 ntBASIC6.5□□□□□ -1.37
NEK3P51956 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
NEK3P51956 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
NEK3P51956 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC6.5□□□□□ -1.37
NEK3P51956 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
NEK3P51956 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
NEK3P51956 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC6.49□□□□□ -1.37
NEK3P51956 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
NEK3P51956 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC6.49□□□□□ -1.37
NEK3P51956 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
NEK3P51956 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
NEK3P51956 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
NEK3P51956 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
NEK3P51956 TCP1P3-201ENST00000414406 1498 ntBASIC6.49□□□□□ -1.37
NEK3P51956 AC007842.1-201ENST00000597336 2039 ntBASIC6.49□□□□□ -1.37
NEK3P51956 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
NEK3P51956 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.49□□□□□ -1.37
NEK3P51956 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
NEK3P51956 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
NEK3P51956 ODF3-202ENST00000342593 386 ntTSL 5 BASIC6.49□□□□□ -1.37
NEK3P51956 RNA5SP350-201ENST00000363298 111 ntBASIC6.49□□□□□ -1.37
NEK3P51956 RNU6-792P-201ENST00000363490 107 ntBASIC6.49□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms