Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HCFC1P51610 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC5.13□□□□□ -1.59
HCFC1P51610 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC5.13□□□□□ -1.59
HCFC1P51610 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
HCFC1P51610 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
HCFC1P51610 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
HCFC1P51610 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HCFC1P51610 AC016583.1-201ENST00000624221 2431 ntBASIC5.13□□□□□ -1.59
HCFC1P51610 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC5.13□□□□□ -1.59
HCFC1P51610 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC5.13□□□□□ -1.59
HCFC1P51610 BTRC-204ENST00000408038 5982 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HCFC1P51610 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HCFC1P51610 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
HCFC1P51610 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HCFC1P51610 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
HCFC1P51610 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
HCFC1P51610 TNPO1P1-201ENST00000423641 1138 ntBASIC5.13□□□□□ -1.59
HCFC1P51610 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC5.13□□□□□ -1.59
HCFC1P51610 RN7SL547P-201ENST00000490793 290 ntBASIC5.13□□□□□ -1.59
HCFC1P51610 NDUFA5P12-201ENST00000503796 343 ntBASIC5.13□□□□□ -1.59
HCFC1P51610 MTCO3P42-201ENST00000509488 518 ntBASIC5.13□□□□□ -1.59
HCFC1P51610 MTCO3P39-201ENST00000514812 518 ntBASIC5.13□□□□□ -1.59
HCFC1P51610 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC5.13□□□□□ -1.59
HCFC1P51610 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5.13□□□□□ -1.59
HCFC1P51610 AC084033.1-201ENST00000550830 633 ntBASIC5.13□□□□□ -1.59
HCFC1P51610 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.13□□□□□ -1.59
HCFC1P51610 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.13□□□□□ -1.59
HCFC1P51610 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC5.13□□□□□ -1.59
HCFC1P51610 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.13□□□□□ -1.59
HCFC1P51610 AL121612.2-201ENST00000612261 482 ntBASIC5.13□□□□□ -1.59
HCFC1P51610 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC5.13□□□□□ -1.59
HCFC1P51610 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
HCFC1P51610 AP003072.5-201ENST00000623872 773 ntBASIC5.13□□□□□ -1.59
HCFC1P51610 OR11H2-202ENST00000641517 1085 ntBASIC5.13□□□□□ -1.59
HCFC1P51610 AL121768.1-201ENST00000613917 2544 ntBASIC5.13□□□□□ -1.59
HCFC1P51610 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC5.12□□□□□ -1.59
HCFC1P51610 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
HCFC1P51610 AC068769.1-201ENST00000474767 2426 ntBASIC5.12□□□□□ -1.59
HCFC1P51610 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
HCFC1P51610 LINC01616-201ENST00000561816 2280 ntBASIC5.12□□□□□ -1.59
HCFC1P51610 YES1P1-201ENST00000418510 1628 ntBASIC5.12□□□□□ -1.59
HCFC1P51610 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
HCFC1P51610 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.12□□□□□ -1.59
HCFC1P51610 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC5.12□□□□□ -1.59
HCFC1P51610 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC5.12□□□□□ -1.59
HCFC1P51610 AC007842.1-201ENST00000597336 2039 ntBASIC5.12□□□□□ -1.59
HCFC1P51610 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
HCFC1P51610 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.12□□□□□ -1.59
HCFC1P51610 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
HCFC1P51610 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC5.12□□□□□ -1.59
HCFC1P51610 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
HCFC1P51610 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
HCFC1P51610 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HCFC1P51610 AC235565.1-201ENST00000456962 1325 ntBASIC5.12□□□□□ -1.59
HCFC1P51610 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HCFC1P51610 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HCFC1P51610 RNA5SP131-201ENST00000365452 119 ntBASIC5.12□□□□□ -1.59
HCFC1P51610 UBE2V1P14-201ENST00000415815 558 ntBASIC5.12□□□□□ -1.59
HCFC1P51610 RPS4XP5-201ENST00000419038 768 ntBASIC5.12□□□□□ -1.59
HCFC1P51610 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.12□□□□□ -1.59
HCFC1P51610 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC5.12□□□□□ -1.59
HCFC1P51610 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.12□□□□□ -1.59
HCFC1P51610 OR6C71P-201ENST00000432580 913 ntBASIC5.12□□□□□ -1.59
HCFC1P51610 ARL4AP4-201ENST00000434170 518 ntBASIC5.12□□□□□ -1.59
HCFC1P51610 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.12□□□□□ -1.59
HCFC1P51610 MTCO3P17-201ENST00000443775 513 ntBASIC5.12□□□□□ -1.59
HCFC1P51610 AURKAPS1-201ENST00000451805 1212 ntBASIC5.12□□□□□ -1.59
HCFC1P51610 AL606490.1-201ENST00000452266 765 ntBASIC5.12□□□□□ -1.59
HCFC1P51610 DUTP7-201ENST00000507982 486 ntBASIC5.12□□□□□ -1.59
HCFC1P51610 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC5.12□□□□□ -1.59
HCFC1P51610 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.12□□□□□ -1.59
HCFC1P51610 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.12□□□□□ -1.59
HCFC1P51610 AC022784.5-201ENST00000522241 437 ntBASIC5.12□□□□□ -1.59
HCFC1P51610 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC5.12□□□□□ -1.59
HCFC1P51610 AC105036.1-201ENST00000566222 271 ntBASIC5.12□□□□□ -1.59
HCFC1P51610 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HCFC1P51610 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.12□□□□□ -1.59
HCFC1P51610 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC5.12□□□□□ -1.59
HCFC1P51610 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HCFC1P51610 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
HCFC1P51610 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HCFC1P51610 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HCFC1P51610 TACC1-207ENST00000519416 5510 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HCFC1P51610 TACC1-210ENST00000520615 5509 ntTSL 2 BASIC5.12□□□□□ -1.59
HCFC1P51610 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HCFC1P51610 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
HCFC1P51610 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
HCFC1P51610 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
HCFC1P51610 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HCFC1P51610 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HCFC1P51610 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
HCFC1P51610 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HCFC1P51610 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HCFC1P51610 AOX3P-204ENST00000491025 2107 ntBASIC5.12□□□□□ -1.59
HCFC1P51610 LCOR-201ENST00000286067 4542 ntBASIC5.11□□□□□ -1.59
HCFC1P51610 AC119674.1-213ENST00000641177 1386 ntBASIC5.11□□□□□ -1.59
HCFC1P51610 AL353763.1-201ENST00000624467 1628 ntBASIC5.11□□□□□ -1.59
HCFC1P51610 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HCFC1P51610 RNA5SP183-201ENST00000362452 119 ntBASIC5.11□□□□□ -1.59
HCFC1P51610 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms