Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
LHX2P50458 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
LHX2P50458 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
LHX2P50458 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC5.23□□□□□ -1.57
LHX2P50458 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
LHX2P50458 AL731532.1-201ENST00000623972 4236 ntBASIC5.23□□□□□ -1.57
LHX2P50458 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
LHX2P50458 AP000432.2-201ENST00000624164 2048 ntBASIC5.23□□□□□ -1.57
LHX2P50458 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC5.23□□□□□ -1.57
LHX2P50458 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.22□□□□□ -1.57
LHX2P50458 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.22□□□□□ -1.57
LHX2P50458 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.22□□□□□ -1.57
LHX2P50458 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
LHX2P50458 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
LHX2P50458 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.22□□□□□ -1.57
LHX2P50458 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
LHX2P50458 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.22□□□□□ -1.57
LHX2P50458 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
LHX2P50458 RNA5SP394-201ENST00000364216 119 ntBASIC5.22□□□□□ -1.57
LHX2P50458 RN7SKP81-201ENST00000365603 331 ntBASIC5.22□□□□□ -1.57
LHX2P50458 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC5.22□□□□□ -1.57
LHX2P50458 HMGB1P20-201ENST00000402555 677 ntBASIC5.22□□□□□ -1.57
LHX2P50458 SDHDP6-201ENST00000414693 480 ntBASIC5.22□□□□□ -1.57
LHX2P50458 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC5.22□□□□□ -1.57
LHX2P50458 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.22□□□□□ -1.57
LHX2P50458 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.22□□□□□ -1.57
LHX2P50458 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
LHX2P50458 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC5.22□□□□□ -1.57
LHX2P50458 AL365220.1-201ENST00000432923 399 ntBASIC5.22□□□□□ -1.57
LHX2P50458 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.22□□□□□ -1.57
LHX2P50458 AL391987.1-201ENST00000441025 200 ntBASIC5.22□□□□□ -1.57
LHX2P50458 AC015983.1-201ENST00000441577 373 ntBASIC5.22□□□□□ -1.57
LHX2P50458 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
LHX2P50458 RPS23P6-201ENST00000466136 431 ntBASIC5.22□□□□□ -1.57
LHX2P50458 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC5.22□□□□□ -1.57
LHX2P50458 AC022215.1-201ENST00000481770 362 ntBASIC5.22□□□□□ -1.57
LHX2P50458 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
LHX2P50458 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC5.22□□□□□ -1.57
LHX2P50458 IGKV2-19-201ENST00000518132 283 ntBASIC5.22□□□□□ -1.57
LHX2P50458 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.22□□□□□ -1.57
LHX2P50458 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.22□□□□□ -1.57
LHX2P50458 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.22□□□□□ -1.57
LHX2P50458 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
LHX2P50458 OR7A8P-201ENST00000595427 913 ntBASIC5.22□□□□□ -1.57
LHX2P50458 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.22□□□□□ -1.57
LHX2P50458 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.22□□□□□ -1.57
LHX2P50458 AL355480.1-201ENST00000629041 99 ntBASIC5.22□□□□□ -1.57
LHX2P50458 AC087565.3-203ENST00000641018 837 ntBASIC5.22□□□□□ -1.57
LHX2P50458 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
LHX2P50458 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
LHX2P50458 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC5.22□□□□□ -1.57
LHX2P50458 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
LHX2P50458 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
LHX2P50458 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
LHX2P50458 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
LHX2P50458 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
LHX2P50458 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
LHX2P50458 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
LHX2P50458 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
LHX2P50458 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
LHX2P50458 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
LHX2P50458 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
LHX2P50458 AC005224.3-201ENST00000584683 2140 ntBASIC5.21□□□□□ -1.57
LHX2P50458 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.57
LHX2P50458 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
LHX2P50458 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.21□□□□□ -1.57
LHX2P50458 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
LHX2P50458 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.57
LHX2P50458 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.21□□□□□ -1.57
LHX2P50458 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
LHX2P50458 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
LHX2P50458 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
LHX2P50458 RPS2P45-201ENST00000469997 2057 ntBASIC5.21□□□□□ -1.58
LHX2P50458 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
LHX2P50458 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
LHX2P50458 SNORD1C-201ENST00000363315 78 ntBASIC5.21□□□□□ -1.58
LHX2P50458 AC087752.1-201ENST00000391360 558 ntBASIC5.21□□□□□ -1.58
LHX2P50458 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
LHX2P50458 AL512422.1-201ENST00000407033 553 ntBASIC5.21□□□□□ -1.58
LHX2P50458 RNA5SP178-201ENST00000410380 128 ntBASIC5.21□□□□□ -1.58
LHX2P50458 AL357752.1-201ENST00000412817 349 ntBASIC5.21□□□□□ -1.58
LHX2P50458 RPL34P3-201ENST00000421454 338 ntBASIC5.21□□□□□ -1.58
LHX2P50458 AC019205.1-201ENST00000421830 730 ntBASIC5.21□□□□□ -1.58
LHX2P50458 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.21□□□□□ -1.58
LHX2P50458 AL022331.1-201ENST00000429025 477 ntBASIC5.21□□□□□ -1.58
LHX2P50458 HMGB3P24-201ENST00000433260 622 ntBASIC5.21□□□□□ -1.58
LHX2P50458 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
LHX2P50458 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
LHX2P50458 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC5.21□□□□□ -1.58
LHX2P50458 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.21□□□□□ -1.58
LHX2P50458 RNU1-88P-201ENST00000459274 128 ntBASIC5.21□□□□□ -1.58
LHX2P50458 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.21□□□□□ -1.58
LHX2P50458 TRBV5-2-201ENST00000489095 273 ntBASIC5.21□□□□□ -1.58
LHX2P50458 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.21□□□□□ -1.58
LHX2P50458 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
LHX2P50458 TOMM22P4-201ENST00000511318 336 ntBASIC5.21□□□□□ -1.58
LHX2P50458 SCARNA6.1-201ENST00000516989 238 ntBASIC5.21□□□□□ -1.58
LHX2P50458 AC112191.2-201ENST00000522428 333 ntBASIC5.21□□□□□ -1.58
LHX2P50458 AC090424.1-201ENST00000535243 736 ntBASIC5.21□□□□□ -1.58
LHX2P50458 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms