Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 AC084033.1-201ENST00000550830 633 ntBASIC6.19□□□□□ -1.42
LHX1P48742 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC6.19□□□□□ -1.42
LHX1P48742 AC135626.1-201ENST00000556983 435 ntBASIC6.19□□□□□ -1.42
LHX1P48742 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
LHX1P48742 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC6.19□□□□□ -1.42
LHX1P48742 AC015802.2-201ENST00000589690 189 ntBASIC6.19□□□□□ -1.42
LHX1P48742 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC6.19□□□□□ -1.42
LHX1P48742 PCA3_2.1-201ENST00000612507 409 ntBASIC6.19□□□□□ -1.42
LHX1P48742 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC6.19□□□□□ -1.42
LHX1P48742 AC022919.1-201ENST00000624979 626 ntBASIC6.19□□□□□ -1.42
LHX1P48742 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC6.19□□□□□ -1.42
LHX1P48742 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC6.19□□□□□ -1.42
LHX1P48742 AC008691.1-209ENST00000642094 814 ntBASIC6.19□□□□□ -1.42
LHX1P48742 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
LHX1P48742 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC6.19□□□□□ -1.42
LHX1P48742 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC6.19□□□□□ -1.42
LHX1P48742 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
LHX1P48742 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
LHX1P48742 AC117409.1-201ENST00000470499 1310 ntBASIC6.19□□□□□ -1.42
LHX1P48742 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
LHX1P48742 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC6.19□□□□□ -1.42
LHX1P48742 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
LHX1P48742 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
LHX1P48742 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC6.18□□□□□ -1.42
LHX1P48742 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.18□□□□□ -1.42
LHX1P48742 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
LHX1P48742 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.18□□□□□ -1.42
LHX1P48742 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
LHX1P48742 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
LHX1P48742 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC6.18□□□□□ -1.42
LHX1P48742 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
LHX1P48742 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
LHX1P48742 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
LHX1P48742 RN7SKP78-201ENST00000364711 318 ntBASIC6.18□□□□□ -1.42
LHX1P48742 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
LHX1P48742 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC6.18□□□□□ -1.42
LHX1P48742 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC6.18□□□□□ -1.42
LHX1P48742 AC127526.2-201ENST00000426436 775 ntBASIC6.18□□□□□ -1.42
LHX1P48742 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC6.18□□□□□ -1.42
LHX1P48742 TPTE2P1-204ENST00000435256 593 ntBASIC6.18□□□□□ -1.42
LHX1P48742 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC6.18□□□□□ -1.42
LHX1P48742 AC013410.1-201ENST00000436223 1232 ntBASIC6.18□□□□□ -1.42
LHX1P48742 MRPS21P3-201ENST00000436696 262 ntBASIC6.18□□□□□ -1.42
LHX1P48742 AC064862.4-201ENST00000442180 334 ntBASIC6.18□□□□□ -1.42
LHX1P48742 HMGN1P36-201ENST00000446623 298 ntBASIC6.18□□□□□ -1.42
LHX1P48742 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC6.18□□□□□ -1.42
LHX1P48742 RN7SL273P-201ENST00000481561 299 ntBASIC6.18□□□□□ -1.42
LHX1P48742 AC074255.1-201ENST00000511259 501 ntBASIC6.18□□□□□ -1.42
LHX1P48742 TOMM22P4-201ENST00000511318 336 ntBASIC6.18□□□□□ -1.42
LHX1P48742 RN7SKP248-201ENST00000516278 305 ntBASIC6.18□□□□□ -1.42
LHX1P48742 TMEM97P2-201ENST00000517841 403 ntBASIC6.18□□□□□ -1.42
LHX1P48742 IGLV3-30-201ENST00000524362 298 ntBASIC6.18□□□□□ -1.42
LHX1P48742 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.18□□□□□ -1.42
LHX1P48742 AC090424.1-201ENST00000535243 736 ntBASIC6.18□□□□□ -1.42
LHX1P48742 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC6.18□□□□□ -1.42
LHX1P48742 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC6.18□□□□□ -1.42
LHX1P48742 AL163952.1-202ENST00000569625 600 ntBASIC6.18□□□□□ -1.42
LHX1P48742 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC6.18□□□□□ -1.42
LHX1P48742 AC005224.3-201ENST00000584683 2140 ntBASIC6.18□□□□□ -1.42
LHX1P48742 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC6.18□□□□□ -1.42
LHX1P48742 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC6.18□□□□□ -1.42
LHX1P48742 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC6.18□□□□□ -1.42
LHX1P48742 AL352984.2-201ENST00000611153 546 ntBASIC6.18□□□□□ -1.42
LHX1P48742 AC126175.1-201ENST00000617041 758 ntBASIC6.18□□□□□ -1.42
LHX1P48742 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
LHX1P48742 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC6.18□□□□□ -1.42
LHX1P48742 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
LHX1P48742 AC087565.3-203ENST00000641018 837 ntBASIC6.18□□□□□ -1.42
LHX1P48742 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
LHX1P48742 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC6.18□□□□□ -1.42
LHX1P48742 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
LHX1P48742 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
LHX1P48742 CR383656.5-201ENST00000547616 1340 ntBASIC6.18□□□□□ -1.42
LHX1P48742 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
LHX1P48742 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
LHX1P48742 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
LHX1P48742 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
LHX1P48742 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
LHX1P48742 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC6.17□□□□□ -1.42
LHX1P48742 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
LHX1P48742 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
LHX1P48742 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
LHX1P48742 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.17□□□□□ -1.42
LHX1P48742 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC6.17□□□□□ -1.42
LHX1P48742 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
LHX1P48742 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
LHX1P48742 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
LHX1P48742 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
LHX1P48742 FUNDC2P3-201ENST00000334716 533 ntBASIC6.17□□□□□ -1.42
LHX1P48742 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
LHX1P48742 RN7SKP269-201ENST00000365545 319 ntBASIC6.17□□□□□ -1.42
LHX1P48742 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
LHX1P48742 HMGB1P20-201ENST00000402555 677 ntBASIC6.17□□□□□ -1.42
LHX1P48742 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC6.17□□□□□ -1.42
LHX1P48742 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC6.17□□□□□ -1.42
LHX1P48742 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC6.17□□□□□ -1.42
LHX1P48742 HMGB3P24-201ENST00000433260 622 ntBASIC6.17□□□□□ -1.42
LHX1P48742 RPL36AP39-201ENST00000445859 318 ntBASIC6.17□□□□□ -1.42
LHX1P48742 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC6.17□□□□□ -1.42
LHX1P48742 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms