Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC6.41□□□□□ -1.38
SLC6A4P31645 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC6.41□□□□□ -1.38
SLC6A4P31645 AC090115.2-201ENST00000548060 883 ntBASIC6.41□□□□□ -1.38
SLC6A4P31645 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SLC6A4P31645 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC6.41□□□□□ -1.38
SLC6A4P31645 AC106730.2-201ENST00000566641 540 ntBASIC6.41□□□□□ -1.38
SLC6A4P31645 AC007346.1-201ENST00000569208 867 ntBASIC6.41□□□□□ -1.38
SLC6A4P31645 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC6.41□□□□□ -1.38
SLC6A4P31645 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC6.41□□□□□ -1.38
SLC6A4P31645 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC6.41□□□□□ -1.38
SLC6A4P31645 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC6.41□□□□□ -1.38
SLC6A4P31645 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC6.41□□□□□ -1.38
SLC6A4P31645 AC073333.2-201ENST00000603589 769 ntBASIC6.41□□□□□ -1.38
SLC6A4P31645 OR51C1P-201ENST00000608504 942 ntBASIC6.41□□□□□ -1.38
SLC6A4P31645 MIR1264-201ENST00000616374 69 ntBASIC6.41□□□□□ -1.38
SLC6A4P31645 AL512652.1-201ENST00000619006 500 ntBASIC6.41□□□□□ -1.38
SLC6A4P31645 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC6.41□□□□□ -1.38
SLC6A4P31645 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC6.41□□□□□ -1.38
SLC6A4P31645 OR7A1P-202ENST00000641542 1158 ntBASIC6.41□□□□□ -1.38
SLC6A4P31645 ERG-202ENST00000398897 4651 ntTSL 5 BASIC6.41□□□□□ -1.38
SLC6A4P31645 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC6.41□□□□□ -1.38
SLC6A4P31645 AL929601.4-201ENST00000613011 1341 ntBASIC6.41□□□□□ -1.38
SLC6A4P31645 AC005034.3-201ENST00000604845 1747 ntBASIC6.41□□□□□ -1.38
SLC6A4P31645 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SLC6A4P31645 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
SLC6A4P31645 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SLC6A4P31645 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
SLC6A4P31645 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SLC6A4P31645 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC6.41□□□□□ -1.38
SLC6A4P31645 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
SLC6A4P31645 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.4□□□□□ -1.38
SLC6A4P31645 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC6.4□□□□□ -1.38
SLC6A4P31645 AP001541.1-201ENST00000623322 1904 ntBASIC6.4□□□□□ -1.38
SLC6A4P31645 AC010401.2-201ENST00000575137 4934 ntBASIC6.4□□□□□ -1.38
SLC6A4P31645 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC6.4□□□□□ -1.38
SLC6A4P31645 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC6.4□□□□□ -1.38
SLC6A4P31645 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC6.4□□□□□ -1.38
SLC6A4P31645 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
SLC6A4P31645 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
SLC6A4P31645 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.4□□□□□ -1.38
SLC6A4P31645 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
SLC6A4P31645 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
SLC6A4P31645 AC007406.5-201ENST00000570140 3170 ntBASIC6.4□□□□□ -1.38
SLC6A4P31645 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC6.4□□□□□ -1.38
SLC6A4P31645 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
SLC6A4P31645 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC6.4□□□□□ -1.38
SLC6A4P31645 AC027279.1-201ENST00000568885 4284 ntBASIC6.4□□□□□ -1.38
SLC6A4P31645 SNORA43.1-201ENST00000364863 140 ntBASIC6.4□□□□□ -1.38
SLC6A4P31645 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC6.4□□□□□ -1.38
SLC6A4P31645 RN7SKP240-201ENST00000410583 375 ntBASIC6.4□□□□□ -1.38
SLC6A4P31645 AC098592.2-201ENST00000413158 265 ntBASIC6.4□□□□□ -1.38
SLC6A4P31645 SEPT7P8-201ENST00000413308 775 ntBASIC6.4□□□□□ -1.38
SLC6A4P31645 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC6.4□□□□□ -1.38
SLC6A4P31645 BMS1P13-201ENST00000417301 885 ntBASIC6.4□□□□□ -1.38
SLC6A4P31645 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
SLC6A4P31645 ATP5A1P8-201ENST00000423669 1291 ntBASIC6.4□□□□□ -1.38
SLC6A4P31645 AC069154.1-201ENST00000432914 542 ntBASIC6.4□□□□□ -1.38
SLC6A4P31645 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC6.4□□□□□ -1.38
SLC6A4P31645 PTP4A1P3-201ENST00000433661 420 ntBASIC6.4□□□□□ -1.38
SLC6A4P31645 AC110602.1-201ENST00000437414 318 ntBASIC6.4□□□□□ -1.38
SLC6A4P31645 RRM2P4-201ENST00000441721 562 ntBASIC6.4□□□□□ -1.38
SLC6A4P31645 GAPDHP23-201ENST00000444823 993 ntBASIC6.4□□□□□ -1.38
SLC6A4P31645 AC097463.1-201ENST00000447288 481 ntBASIC6.4□□□□□ -1.38
SLC6A4P31645 MTND2P6-201ENST00000455337 1030 ntBASIC6.4□□□□□ -1.38
SLC6A4P31645 RNA5SP434-201ENST00000516647 121 ntBASIC6.4□□□□□ -1.38
SLC6A4P31645 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC6.4□□□□□ -1.38
SLC6A4P31645 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC6.4□□□□□ -1.38
SLC6A4P31645 AC104115.2-201ENST00000523026 687 ntBASIC6.4□□□□□ -1.38
SLC6A4P31645 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC6.4□□□□□ -1.38
SLC6A4P31645 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC6.4□□□□□ -1.38
SLC6A4P31645 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC6.4□□□□□ -1.38
SLC6A4P31645 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC6.4□□□□□ -1.38
SLC6A4P31645 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC6.4□□□□□ -1.38
SLC6A4P31645 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC6.4□□□□□ -1.38
SLC6A4P31645 MTATP6P24-201ENST00000576835 677 ntBASIC6.4□□□□□ -1.38
SLC6A4P31645 AC005242.1-201ENST00000585658 438 ntBASIC6.4□□□□□ -1.38
SLC6A4P31645 AC067852.5-201ENST00000589299 310 ntBASIC6.4□□□□□ -1.38
SLC6A4P31645 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC6.4□□□□□ -1.38
SLC6A4P31645 AC097065.2-201ENST00000608159 533 ntBASIC6.4□□□□□ -1.38
SLC6A4P31645 AP001437.1-201ENST00000608783 456 ntBASIC6.4□□□□□ -1.38
SLC6A4P31645 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC6.4□□□□□ -1.38
SLC6A4P31645 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC6.4□□□□□ -1.38
SLC6A4P31645 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
SLC6A4P31645 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.39
SLC6A4P31645 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC6.4□□□□□ -1.39
SLC6A4P31645 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC6.4□□□□□ -1.39
SLC6A4P31645 TCP1P3-201ENST00000414406 1498 ntBASIC6.4□□□□□ -1.39
SLC6A4P31645 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
SLC6A4P31645 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC6.4□□□□□ -1.39
SLC6A4P31645 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.39
SLC6A4P31645 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
SLC6A4P31645 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC6.39□□□□□ -1.39
SLC6A4P31645 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SLC6A4P31645 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
SLC6A4P31645 OR10AB1P-202ENST00000641219 1686 ntBASIC6.39□□□□□ -1.39
SLC6A4P31645 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SLC6A4P31645 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SLC6A4P31645 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.39□□□□□ -1.39
SLC6A4P31645 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC6.39□□□□□ -1.39
SLC6A4P31645 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms