Protein–RNA interactions for Protein: P28827

PTPRM, Receptor-type tyrosine-protein phosphatase mu, humanhuman

Predictions only

Length 1,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRMP28827 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
PTPRMP28827 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
PTPRMP28827 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC8.34□□□□□ -1.07
PTPRMP28827 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
PTPRMP28827 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
PTPRMP28827 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
PTPRMP28827 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC8.33□□□□□ -1.08
PTPRMP28827 KIF6-202ENST00000287152 9082 ntAPPRIS P1 TSL 2 BASIC8.33□□□□□ -1.08
PTPRMP28827 ZNF385D-201ENST00000281523 10699 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
PTPRMP28827 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC8.33□□□□□ -1.08
PTPRMP28827 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC8.33□□□□□ -1.08
PTPRMP28827 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
PTPRMP28827 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
PTPRMP28827 DDX24-209ENST00000621632 5612 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
PTPRMP28827 HLF-210ENST00000575345 3589 ntTSL 2 BASIC8.33□□□□□ -1.08
PTPRMP28827 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
PTPRMP28827 AL353625.1-202ENST00000366273 571 ntBASIC8.33□□□□□ -1.08
PTPRMP28827 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC8.33□□□□□ -1.08
PTPRMP28827 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC8.33□□□□□ -1.08
PTPRMP28827 DNAJC19P7-201ENST00000428811 344 ntBASIC8.33□□□□□ -1.08
PTPRMP28827 AC068522.1-201ENST00000482895 345 ntBASIC8.33□□□□□ -1.08
PTPRMP28827 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC8.33□□□□□ -1.08
PTPRMP28827 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC8.33□□□□□ -1.08
PTPRMP28827 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC8.33□□□□□ -1.08
PTPRMP28827 RNU6-941P-201ENST00000516346 108 ntBASIC8.33□□□□□ -1.08
PTPRMP28827 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC8.33□□□□□ -1.08
PTPRMP28827 IGKV2D-10-201ENST00000520194 281 ntBASIC8.33□□□□□ -1.08
PTPRMP28827 AC034205.1-201ENST00000520621 638 ntBASIC8.33□□□□□ -1.08
PTPRMP28827 GTF2IP11-201ENST00000526931 420 ntBASIC8.33□□□□□ -1.08
PTPRMP28827 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC8.33□□□□□ -1.08
PTPRMP28827 AC078878.1-201ENST00000539832 958 ntBASIC8.33□□□□□ -1.08
PTPRMP28827 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC8.33□□□□□ -1.08
PTPRMP28827 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC8.33□□□□□ -1.08
PTPRMP28827 AC024589.2-201ENST00000605642 1294 ntBASIC8.33□□□□□ -1.08
PTPRMP28827 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
PTPRMP28827 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
PTPRMP28827 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC8.33□□□□□ -1.08
PTPRMP28827 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC8.33□□□□□ -1.08
PTPRMP28827 AOX3P-204ENST00000491025 2107 ntBASIC8.33□□□□□ -1.08
PTPRMP28827 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
PTPRMP28827 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
PTPRMP28827 LINC01616-201ENST00000561816 2280 ntBASIC8.33□□□□□ -1.08
PTPRMP28827 RUNX1T1-249ENST00000613886 7401 ntAPPRIS ALT1 TSL 5 BASIC8.33□□□□□ -1.08
PTPRMP28827 ATG2B-202ENST00000359933 13684 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
PTPRMP28827 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
PTPRMP28827 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
PTPRMP28827 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
PTPRMP28827 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
PTPRMP28827 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC8.33□□□□□ -1.08
PTPRMP28827 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC8.32□□□□□ -1.08
PTPRMP28827 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC8.32□□□□□ -1.08
PTPRMP28827 GTF2IP2-201ENST00000424290 697 ntBASIC8.32□□□□□ -1.08
PTPRMP28827 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC8.32□□□□□ -1.08
PTPRMP28827 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
PTPRMP28827 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
PTPRMP28827 NMNAT1P5-201ENST00000559657 841 ntBASIC8.32□□□□□ -1.08
PTPRMP28827 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
PTPRMP28827 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC8.32□□□□□ -1.08
PTPRMP28827 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC8.32□□□□□ -1.08
PTPRMP28827 AL109618.2-201ENST00000605527 211 ntBASIC8.32□□□□□ -1.08
PTPRMP28827 TEX41-254ENST00000626394 423 ntTSL 5 BASIC8.32□□□□□ -1.08
PTPRMP28827 AL391261.1-201ENST00000555712 1479 ntBASIC8.32□□□□□ -1.08
PTPRMP28827 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
PTPRMP28827 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC8.32□□□□□ -1.08
PTPRMP28827 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
PTPRMP28827 IQCB2P-201ENST00000401788 1633 ntBASIC8.32□□□□□ -1.08
PTPRMP28827 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
PTPRMP28827 NIPBL-201ENST00000282516 10435 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
PTPRMP28827 FAM135B-204ENST00000395297 6962 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
PTPRMP28827 CDH12-201ENST00000382254 4164 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
PTPRMP28827 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
PTPRMP28827 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
PTPRMP28827 AC011504.1-201ENST00000623331 4103 ntBASIC8.32□□□□□ -1.08
PTPRMP28827 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC8.32□□□□□ -1.08
PTPRMP28827 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC8.32□□□□□ -1.08
PTPRMP28827 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC8.32□□□□□ -1.08
PTPRMP28827 ZNF385B-201ENST00000336917 2610 ntTSL 5 BASIC8.32□□□□□ -1.08
PTPRMP28827 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC8.32□□□□□ -1.08
PTPRMP28827 SNORA17.1-201ENST00000362945 126 ntBASIC8.32□□□□□ -1.08
PTPRMP28827 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC8.32□□□□□ -1.08
PTPRMP28827 AC008072.1-201ENST00000434254 824 ntBASIC8.32□□□□□ -1.08
PTPRMP28827 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC8.32□□□□□ -1.08
PTPRMP28827 RPL37AP8-201ENST00000494116 276 ntBASIC8.32□□□□□ -1.08
PTPRMP28827 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC8.32□□□□□ -1.08
PTPRMP28827 AC127381.1-201ENST00000555979 939 ntBASIC8.32□□□□□ -1.08
PTPRMP28827 PARP1P2-201ENST00000556806 195 ntBASIC8.32□□□□□ -1.08
PTPRMP28827 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
PTPRMP28827 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC8.32□□□□□ -1.08
PTPRMP28827 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC8.32□□□□□ -1.08
PTPRMP28827 TEX41-238ENST00000604253 709 ntTSL 5 BASIC8.32□□□□□ -1.08
PTPRMP28827 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC8.32□□□□□ -1.08
PTPRMP28827 MBD5-201ENST00000404807 5920 ntTSL 5 BASIC8.31□□□□□ -1.08
PTPRMP28827 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
PTPRMP28827 LINC01197-205ENST00000614853 1774 ntTSL 3 BASIC8.31□□□□□ -1.08
PTPRMP28827 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC8.31□□□□□ -1.08
PTPRMP28827 GALK2-201ENST00000327171 5299 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
PTPRMP28827 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC8.31□□□□□ -1.08
PTPRMP28827 AC091046.3-201ENST00000631455 1574 ntBASIC8.31□□□□□ -1.08
PTPRMP28827 SOX6-202ENST00000396356 8865 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
PTPRMP28827 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC8.31□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms