Protein–RNA interactions for Protein: P27658

COL8A1, Collagen alpha-1(VIII) chain, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1P27658 AC113139.1-201ENST00000605049 239 ntBASIC6.91□□□□□ -1.3
COL8A1P27658 ACTR3BP1-201ENST00000605584 1247 ntBASIC6.91□□□□□ -1.3
COL8A1P27658 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC6.91□□□□□ -1.3
COL8A1P27658 AC007342.8-201ENST00000623278 678 ntBASIC6.91□□□□□ -1.3
COL8A1P27658 LINC01206-228ENST00000628718 871 ntTSL 5 BASIC6.91□□□□□ -1.3
COL8A1P27658 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC6.91□□□□□ -1.3
COL8A1P27658 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC6.91□□□□□ -1.3
COL8A1P27658 ELOVL5-201ENST00000304434 2827 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
COL8A1P27658 PLEKHA5-215ENST00000539256 3357 ntTSL 2 BASIC6.91□□□□□ -1.3
COL8A1P27658 LINC01013-201ENST00000422700 1831 ntTSL 5 BASIC6.91□□□□□ -1.3
COL8A1P27658 RUBCNL-202ENST00000378784 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
COL8A1P27658 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC6.91□□□□□ -1.3
COL8A1P27658 HNRNPK-205ENST00000376281 2928 ntAPPRIS P4 TSL 1 (best) BASIC6.91□□□□□ -1.3
COL8A1P27658 AC005538.2-201ENST00000623215 1864 ntBASIC6.91□□□□□ -1.3
COL8A1P27658 PNN-201ENST00000216832 3576 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
COL8A1P27658 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC6.91□□□□□ -1.3
COL8A1P27658 AL022323.2-201ENST00000623239 3000 ntBASIC6.91□□□□□ -1.3
COL8A1P27658 AC135352.1-201ENST00000506173 1418 ntBASIC6.91□□□□□ -1.3
COL8A1P27658 WASF5P-205ENST00000428639 1455 ntBASIC6.91□□□□□ -1.3
COL8A1P27658 AC103760.1-201ENST00000521326 1486 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
COL8A1P27658 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
COL8A1P27658 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
COL8A1P27658 PDE4DIP-205ENST00000369354 8262 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
COL8A1P27658 RXFP1-207ENST00000470033 2175 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
COL8A1P27658 AL137782.1-201ENST00000563635 4128 ntTSL 5 BASIC6.91□□□□□ -1.3
COL8A1P27658 DLG2-229ENST00000531015 2892 ntTSL 2 BASIC6.9□□□□□ -1.3
COL8A1P27658 CREM-203ENST00000344351 1625 ntTSL 2 BASIC6.9□□□□□ -1.3
COL8A1P27658 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.3
COL8A1P27658 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
COL8A1P27658 YIPF5-201ENST00000274496 3147 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
COL8A1P27658 TXNRD1-208ENST00000525566 3836 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
COL8A1P27658 ODF2-209ENST00000434106 3890 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
COL8A1P27658 POLR2D-203ENST00000409955 1758 ntTSL 2 BASIC6.9□□□□□ -1.3
COL8A1P27658 HEATR6-201ENST00000184956 3932 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
COL8A1P27658 STAG1-202ENST00000383202 6055 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
COL8A1P27658 GSTM4-203ENST00000369833 3990 ntTSL 5 BASIC6.9□□□□□ -1.3
COL8A1P27658 CDHR3-211ENST00000478080 2633 ntAPPRIS ALT2 TSL 2 BASIC6.9□□□□□ -1.3
COL8A1P27658 R3HDM2P1-201ENST00000505381 1960 ntBASIC6.9□□□□□ -1.3
COL8A1P27658 HEATR9-207ENST00000604834 1974 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.3
COL8A1P27658 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC6.9□□□□□ -1.3
COL8A1P27658 PCDH15-230ENST00000617051 7048 ntTSL 5 BASIC6.9□□□□□ -1.3
COL8A1P27658 REV3L-203ENST00000368805 10461 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
COL8A1P27658 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC6.9□□□□□ -1.3
COL8A1P27658 RNU1-35P-201ENST00000362782 153 ntBASIC6.9□□□□□ -1.3
COL8A1P27658 SNORA4.1-201ENST00000364263 144 ntBASIC6.9□□□□□ -1.3
COL8A1P27658 Y_RNA.315-201ENST00000365117 102 ntBASIC6.9□□□□□ -1.3
COL8A1P27658 SNORA40.3-201ENST00000390964 122 ntBASIC6.9□□□□□ -1.3
COL8A1P27658 AC093719.1-202ENST00000392735 373 ntBASIC6.9□□□□□ -1.3
COL8A1P27658 AL451061.1-201ENST00000407887 862 ntBASIC6.9□□□□□ -1.3
COL8A1P27658 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC6.9□□□□□ -1.3
COL8A1P27658 RNA5SP80-201ENST00000410475 111 ntBASIC6.9□□□□□ -1.3
COL8A1P27658 AMD1P2-201ENST00000412936 992 ntBASIC6.9□□□□□ -1.3
COL8A1P27658 TAF13P2-201ENST00000416876 286 ntBASIC6.9□□□□□ -1.3
COL8A1P27658 CHCHD3P1-201ENST00000425516 676 ntBASIC6.9□□□□□ -1.3
COL8A1P27658 OR5AW1P-201ENST00000426334 1006 ntBASIC6.9□□□□□ -1.3
COL8A1P27658 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
COL8A1P27658 OR52B5P-201ENST00000435337 951 ntBASIC6.9□□□□□ -1.3
COL8A1P27658 AC098828.1-201ENST00000436164 440 ntBASIC6.9□□□□□ -1.3
COL8A1P27658 LDHAP2-201ENST00000437325 985 ntBASIC6.9□□□□□ -1.3
COL8A1P27658 EMC3-AS1-205ENST00000438698 534 ntBASIC6.9□□□□□ -1.3
COL8A1P27658 NQO1-204ENST00000439109 924 ntTSL 2 BASIC6.9□□□□□ -1.3
COL8A1P27658 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC6.9□□□□□ -1.3
COL8A1P27658 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC6.9□□□□□ -1.3
COL8A1P27658 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC6.9□□□□□ -1.3
COL8A1P27658 KF459542.1-201ENST00000450908 553 ntBASIC6.9□□□□□ -1.3
COL8A1P27658 AC087312.1-201ENST00000471411 480 ntBASIC6.9□□□□□ -1.3
COL8A1P27658 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC6.9□□□□□ -1.3
COL8A1P27658 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC6.9□□□□□ -1.3
COL8A1P27658 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC6.9□□□□□ -1.3
COL8A1P27658 AC114981.1-201ENST00000503897 678 ntBASIC6.9□□□□□ -1.3
COL8A1P27658 AC034232.2-201ENST00000511579 917 ntTSL 2 BASIC6.9□□□□□ -1.3
COL8A1P27658 AF131216.2-201ENST00000512316 564 ntBASIC6.9□□□□□ -1.3
COL8A1P27658 AC090835.1-201ENST00000515189 1024 ntBASIC6.9□□□□□ -1.3
COL8A1P27658 RNU6-277P-201ENST00000516272 106 ntBASIC6.9□□□□□ -1.3
COL8A1P27658 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC6.9□□□□□ -1.3
COL8A1P27658 AC022639.1-202ENST00000524360 581 ntTSL 4 BASIC6.9□□□□□ -1.3
COL8A1P27658 AC131935.1-201ENST00000524621 333 ntBASIC6.9□□□□□ -1.3
COL8A1P27658 AC130366.1-201ENST00000526505 1192 ntBASIC6.9□□□□□ -1.3
COL8A1P27658 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC6.9□□□□□ -1.3
COL8A1P27658 AC078860.1-201ENST00000546601 527 ntTSL 2 BASIC6.9□□□□□ -1.3
COL8A1P27658 AL512310.1-201ENST00000548639 172 ntBASIC6.9□□□□□ -1.3
COL8A1P27658 COX4I1P1-201ENST00000554239 509 ntBASIC6.9□□□□□ -1.3
COL8A1P27658 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC6.9□□□□□ -1.3
COL8A1P27658 AC092868.1-201ENST00000557949 802 ntBASIC6.9□□□□□ -1.3
COL8A1P27658 AC025678.1-201ENST00000567861 338 ntBASIC6.9□□□□□ -1.3
COL8A1P27658 AC005262.1-201ENST00000588562 362 ntBASIC6.9□□□□□ -1.3
COL8A1P27658 AC006116.6-201ENST00000593258 1103 ntBASIC6.9□□□□□ -1.3
COL8A1P27658 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
COL8A1P27658 BNIP3P23-201ENST00000599655 511 ntBASIC6.9□□□□□ -1.3
COL8A1P27658 AC093788.1-201ENST00000609356 927 ntBASIC6.9□□□□□ -1.3
COL8A1P27658 AC103710.1-201ENST00000610003 901 ntBASIC6.9□□□□□ -1.3
COL8A1P27658 AL355472.4-201ENST00000610233 626 ntBASIC6.9□□□□□ -1.3
COL8A1P27658 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC6.9□□□□□ -1.3
COL8A1P27658 AL161931.1-201ENST00000612768 246 ntBASIC6.9□□□□□ -1.3
COL8A1P27658 AL355974.3-201ENST00000617383 467 ntBASIC6.9□□□□□ -1.3
COL8A1P27658 Metazoa_SRP.27-201ENST00000617573 258 ntBASIC6.9□□□□□ -1.3
COL8A1P27658 MALAT1-212ENST00000618132 725 ntTSL 2 BASIC6.9□□□□□ -1.3
COL8A1P27658 GBA3-203ENST00000508166 2164 ntAPPRIS P5 TSL 1 (best) BASIC6.9□□□□□ -1.3
COL8A1P27658 C4BPA-201ENST00000367070 2243 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
COL8A1P27658 HGF-209ENST00000457544 2249 ntAPPRIS ALT1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms