Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 AL122023.1-201ENST00000622847 530 ntBASIC5.58□□□□□ -1.52
TNFRSF1BP20333 AP006248.3-201ENST00000623580 594 ntBASIC5.58□□□□□ -1.52
TNFRSF1BP20333 SNX18P12-201ENST00000624821 759 ntBASIC5.58□□□□□ -1.52
TNFRSF1BP20333 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TNFRSF1BP20333 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC5.58□□□□□ -1.52
TNFRSF1BP20333 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC5.58□□□□□ -1.52
TNFRSF1BP20333 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.58□□□□□ -1.52
TNFRSF1BP20333 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TNFRSF1BP20333 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
TNFRSF1BP20333 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TNFRSF1BP20333 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC5.58□□□□□ -1.52
TNFRSF1BP20333 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TNFRSF1BP20333 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC5.58□□□□□ -1.52
TNFRSF1BP20333 MSL3P1-202ENST00000440028 1468 ntBASIC5.58□□□□□ -1.52
TNFRSF1BP20333 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC5.58□□□□□ -1.52
TNFRSF1BP20333 AC217777.1-201ENST00000570034 1471 ntBASIC5.58□□□□□ -1.52
TNFRSF1BP20333 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.58□□□□□ -1.52
TNFRSF1BP20333 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TNFRSF1BP20333 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
TNFRSF1BP20333 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
TNFRSF1BP20333 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
TNFRSF1BP20333 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.57□□□□□ -1.52
TNFRSF1BP20333 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TNFRSF1BP20333 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.57□□□□□ -1.52
TNFRSF1BP20333 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC5.57□□□□□ -1.52
TNFRSF1BP20333 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TNFRSF1BP20333 AC107977.1-201ENST00000355745 939 ntBASIC5.57□□□□□ -1.52
TNFRSF1BP20333 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.57□□□□□ -1.52
TNFRSF1BP20333 RNU6-152P-201ENST00000384037 107 ntBASIC5.57□□□□□ -1.52
TNFRSF1BP20333 MIR122-201ENST00000385044 85 ntBASIC5.57□□□□□ -1.52
TNFRSF1BP20333 AF228730.1-201ENST00000397972 663 ntBASIC5.57□□□□□ -1.52
TNFRSF1BP20333 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.57□□□□□ -1.52
TNFRSF1BP20333 AL096829.1-201ENST00000413677 457 ntBASIC5.57□□□□□ -1.52
TNFRSF1BP20333 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC5.57□□□□□ -1.52
TNFRSF1BP20333 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC5.57□□□□□ -1.52
TNFRSF1BP20333 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC5.57□□□□□ -1.52
TNFRSF1BP20333 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
TNFRSF1BP20333 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC5.57□□□□□ -1.52
TNFRSF1BP20333 PSMD10P2-201ENST00000432890 672 ntBASIC5.57□□□□□ -1.52
TNFRSF1BP20333 AC013403.1-201ENST00000436954 263 ntBASIC5.57□□□□□ -1.52
TNFRSF1BP20333 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC5.57□□□□□ -1.52
TNFRSF1BP20333 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC5.57□□□□□ -1.52
TNFRSF1BP20333 MTATP6P26-201ENST00000445926 662 ntBASIC5.57□□□□□ -1.52
TNFRSF1BP20333 ZNF619P1-201ENST00000446539 752 ntBASIC5.57□□□□□ -1.52
TNFRSF1BP20333 HMGN1P5-201ENST00000448591 263 ntBASIC5.57□□□□□ -1.52
TNFRSF1BP20333 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
TNFRSF1BP20333 SDC4P-201ENST00000453285 601 ntBASIC5.57□□□□□ -1.52
TNFRSF1BP20333 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC5.57□□□□□ -1.52
TNFRSF1BP20333 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC5.57□□□□□ -1.52
TNFRSF1BP20333 RPS3AP15-201ENST00000483874 781 ntBASIC5.57□□□□□ -1.52
TNFRSF1BP20333 RPS3AP6-201ENST00000484430 795 ntBASIC5.57□□□□□ -1.52
TNFRSF1BP20333 AC090058.1-201ENST00000498788 435 ntBASIC5.57□□□□□ -1.52
TNFRSF1BP20333 AC105233.1-201ENST00000498840 781 ntBASIC5.57□□□□□ -1.52
TNFRSF1BP20333 MTCO2P9-201ENST00000503214 694 ntBASIC5.57□□□□□ -1.52
TNFRSF1BP20333 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC5.57□□□□□ -1.52
TNFRSF1BP20333 OR51A1P-201ENST00000511110 946 ntBASIC5.57□□□□□ -1.52
TNFRSF1BP20333 RNU6-964P-201ENST00000516524 69 ntBASIC5.57□□□□□ -1.52
TNFRSF1BP20333 Y_RNA.717-201ENST00000517106 92 ntBASIC5.57□□□□□ -1.52
TNFRSF1BP20333 VTA1P2-201ENST00000520205 911 ntBASIC5.57□□□□□ -1.52
TNFRSF1BP20333 AC099805.1-205ENST00000521794 837 ntTSL 2 BASIC5.57□□□□□ -1.52
TNFRSF1BP20333 TDGP1-201ENST00000543961 1229 ntBASIC5.57□□□□□ -1.52
TNFRSF1BP20333 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC5.57□□□□□ -1.52
TNFRSF1BP20333 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC5.57□□□□□ -1.52
TNFRSF1BP20333 MIR4420-201ENST00000583944 77 ntBASIC5.57□□□□□ -1.52
TNFRSF1BP20333 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC5.57□□□□□ -1.52
TNFRSF1BP20333 SNORA74.4-201ENST00000607595 199 ntBASIC5.57□□□□□ -1.52
TNFRSF1BP20333 AC093388.1-201ENST00000609166 430 ntBASIC5.57□□□□□ -1.52
TNFRSF1BP20333 MIR6885-201ENST00000612241 66 ntBASIC5.57□□□□□ -1.52
TNFRSF1BP20333 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC5.57□□□□□ -1.52
TNFRSF1BP20333 MIR6811-201ENST00000620409 58 ntBASIC5.57□□□□□ -1.52
TNFRSF1BP20333 AC089999.3-201ENST00000622440 577 ntBASIC5.57□□□□□ -1.52
TNFRSF1BP20333 AC068057.2-201ENST00000624047 895 ntBASIC5.57□□□□□ -1.52
TNFRSF1BP20333 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC5.57□□□□□ -1.52
TNFRSF1BP20333 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC5.57□□□□□ -1.52
TNFRSF1BP20333 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC5.57□□□□□ -1.52
TNFRSF1BP20333 AC022325.1-201ENST00000502748 2199 ntBASIC5.57□□□□□ -1.52
TNFRSF1BP20333 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
TNFRSF1BP20333 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
TNFRSF1BP20333 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC5.57□□□□□ -1.52
TNFRSF1BP20333 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TNFRSF1BP20333 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TNFRSF1BP20333 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
TNFRSF1BP20333 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
TNFRSF1BP20333 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
TNFRSF1BP20333 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
TNFRSF1BP20333 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
TNFRSF1BP20333 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.56□□□□□ -1.52
TNFRSF1BP20333 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
TNFRSF1BP20333 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
TNFRSF1BP20333 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
TNFRSF1BP20333 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
TNFRSF1BP20333 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
TNFRSF1BP20333 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
TNFRSF1BP20333 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
TNFRSF1BP20333 SNORA64.3-201ENST00000365647 134 ntBASIC5.56□□□□□ -1.52
TNFRSF1BP20333 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC5.56□□□□□ -1.52
TNFRSF1BP20333 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC5.56□□□□□ -1.52
TNFRSF1BP20333 AC121334.1-201ENST00000396414 802 ntBASIC5.56□□□□□ -1.52
TNFRSF1BP20333 RN7SKP166-201ENST00000410812 305 ntBASIC5.56□□□□□ -1.52
TNFRSF1BP20333 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms