Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
ERCC3P19447 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC7.9□□□□□ -1.14
ERCC3P19447 OR4A2P-201ENST00000527276 913 ntBASIC7.9□□□□□ -1.14
ERCC3P19447 AC025260.1-201ENST00000548858 430 ntBASIC7.9□□□□□ -1.14
ERCC3P19447 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC7.9□□□□□ -1.14
ERCC3P19447 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC7.9□□□□□ -1.14
ERCC3P19447 AC018558.5-201ENST00000565840 952 ntBASIC7.9□□□□□ -1.14
ERCC3P19447 MT1CP-201ENST00000567054 174 ntBASIC7.9□□□□□ -1.14
ERCC3P19447 MIR3135A-201ENST00000578460 77 ntBASIC7.9□□□□□ -1.14
ERCC3P19447 LINC01919-203ENST00000581198 598 ntTSL 3 BASIC7.9□□□□□ -1.14
ERCC3P19447 AC005244.1-201ENST00000582566 339 ntBASIC7.9□□□□□ -1.14
ERCC3P19447 AL583832.1-201ENST00000603227 784 ntBASIC7.9□□□□□ -1.14
ERCC3P19447 AC007255.2-201ENST00000604053 631 ntBASIC7.9□□□□□ -1.14
ERCC3P19447 AC009237.15-201ENST00000610252 501 ntBASIC7.9□□□□□ -1.14
ERCC3P19447 uc_338.29-201ENST00000615099 168 ntBASIC7.9□□□□□ -1.14
ERCC3P19447 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC7.9□□□□□ -1.14
ERCC3P19447 AL121895.2-201ENST00000619558 447 ntBASIC7.9□□□□□ -1.14
ERCC3P19447 AC089999.3-201ENST00000622440 577 ntBASIC7.9□□□□□ -1.14
ERCC3P19447 AC006328.2-201ENST00000623198 397 ntBASIC7.9□□□□□ -1.14
ERCC3P19447 AC012005.2-201ENST00000624333 397 ntBASIC7.9□□□□□ -1.14
ERCC3P19447 AC061999.1-201ENST00000624454 177 ntBASIC7.9□□□□□ -1.14
ERCC3P19447 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC7.9□□□□□ -1.14
ERCC3P19447 AC119674.1-212ENST00000641155 993 ntBASIC7.9□□□□□ -1.14
ERCC3P19447 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC7.9□□□□□ -1.14
ERCC3P19447 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
ERCC3P19447 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC7.9□□□□□ -1.15
ERCC3P19447 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
ERCC3P19447 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
ERCC3P19447 NAALAD2-201ENST00000321955 3035 ntTSL 2 BASIC7.89□□□□□ -1.15
ERCC3P19447 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
ERCC3P19447 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
ERCC3P19447 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
ERCC3P19447 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
ERCC3P19447 KCNMB2-202ENST00000420517 1563 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
ERCC3P19447 EPHA6-204ENST00000502694 1582 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
ERCC3P19447 CNOT4-206ENST00000428680 4642 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
ERCC3P19447 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC7.89□□□□□ -1.15
ERCC3P19447 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC7.89□□□□□ -1.15
ERCC3P19447 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
ERCC3P19447 AC005839.1-201ENST00000624148 3213 ntBASIC7.89□□□□□ -1.15
ERCC3P19447 RNU6-666P-201ENST00000363499 107 ntBASIC7.89□□□□□ -1.15
ERCC3P19447 RNU6-532P-201ENST00000384318 107 ntBASIC7.89□□□□□ -1.15
ERCC3P19447 AC244452.1-201ENST00000413798 141 ntBASIC7.89□□□□□ -1.15
ERCC3P19447 AL008987.1-201ENST00000415528 237 ntBASIC7.89□□□□□ -1.15
ERCC3P19447 AC234781.4-201ENST00000419384 244 ntBASIC7.89□□□□□ -1.15
ERCC3P19447 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC7.89□□□□□ -1.15
ERCC3P19447 PRUNEP1-201ENST00000425846 705 ntBASIC7.89□□□□□ -1.15
ERCC3P19447 USP9YP11-201ENST00000427537 717 ntBASIC7.89□□□□□ -1.15
ERCC3P19447 RPL23AP4-201ENST00000427757 463 ntBASIC7.89□□□□□ -1.15
ERCC3P19447 RPSAP32-201ENST00000432681 526 ntBASIC7.89□□□□□ -1.15
ERCC3P19447 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC7.89□□□□□ -1.15
ERCC3P19447 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC7.89□□□□□ -1.15
ERCC3P19447 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC7.89□□□□□ -1.15
ERCC3P19447 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC7.89□□□□□ -1.15
ERCC3P19447 DNAJA1P5-201ENST00000440278 943 ntBASIC7.89□□□□□ -1.15
ERCC3P19447 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC7.89□□□□□ -1.15
ERCC3P19447 AL050331.2-201ENST00000457319 421 ntTSL 3 BASIC7.89□□□□□ -1.15
ERCC3P19447 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
ERCC3P19447 RN7SL216P-201ENST00000471607 298 ntBASIC7.89□□□□□ -1.15
ERCC3P19447 ZNF286A-205ENST00000472486 827 ntTSL 2 BASIC7.89□□□□□ -1.15
ERCC3P19447 PGBD4P1-201ENST00000473644 407 ntBASIC7.89□□□□□ -1.15
ERCC3P19447 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC7.89□□□□□ -1.15
ERCC3P19447 AC021146.11-201ENST00000503319 491 ntBASIC7.89□□□□□ -1.15
ERCC3P19447 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC7.89□□□□□ -1.15
ERCC3P19447 AC008565.1-201ENST00000509046 885 ntBASIC7.89□□□□□ -1.15
ERCC3P19447 AC093816.1-201ENST00000515076 913 ntBASIC7.89□□□□□ -1.15
ERCC3P19447 RN7SKP70-201ENST00000516655 271 ntBASIC7.89□□□□□ -1.15
ERCC3P19447 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC7.89□□□□□ -1.15
ERCC3P19447 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC7.89□□□□□ -1.15
ERCC3P19447 LDHC-203ENST00000535809 757 ntTSL 5 BASIC7.89□□□□□ -1.15
ERCC3P19447 LDHC-205ENST00000537486 583 ntTSL 5 BASIC7.89□□□□□ -1.15
ERCC3P19447 AC007068.2-201ENST00000543168 395 ntBASIC7.89□□□□□ -1.15
ERCC3P19447 AC005519.1-201ENST00000554490 601 ntBASIC7.89□□□□□ -1.15
ERCC3P19447 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC7.89□□□□□ -1.15
ERCC3P19447 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC7.89□□□□□ -1.15
ERCC3P19447 AC009094.1-201ENST00000564443 426 ntBASIC7.89□□□□□ -1.15
ERCC3P19447 NUDT7-206ENST00000568787 678 ntTSL 2 BASIC7.89□□□□□ -1.15
ERCC3P19447 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC7.89□□□□□ -1.15
ERCC3P19447 PPP4R1-AS1-201ENST00000582435 379 ntTSL 2 BASIC7.89□□□□□ -1.15
ERCC3P19447 MIR4271-201ENST00000582451 67 ntBASIC7.89□□□□□ -1.15
ERCC3P19447 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC7.89□□□□□ -1.15
ERCC3P19447 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC7.89□□□□□ -1.15
ERCC3P19447 AL353778.1-201ENST00000603149 408 ntBASIC7.89□□□□□ -1.15
ERCC3P19447 AC012368.3-201ENST00000604190 219 ntBASIC7.89□□□□□ -1.15
ERCC3P19447 TUSC7.1-201ENST00000610969 165 ntBASIC7.89□□□□□ -1.15
ERCC3P19447 VN1R74P-201ENST00000613259 503 ntBASIC7.89□□□□□ -1.15
ERCC3P19447 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
ERCC3P19447 AL157778.1-201ENST00000626665 729 ntTSL 3 BASIC7.89□□□□□ -1.15
ERCC3P19447 5S_rRNA.29-201ENST00000641250 107 ntBASIC7.89□□□□□ -1.15
ERCC3P19447 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
ERCC3P19447 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC7.89□□□□□ -1.15
ERCC3P19447 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC7.89□□□□□ -1.15
ERCC3P19447 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
ERCC3P19447 LINC01559-201ENST00000318426 2750 ntTSL 2 BASIC7.89□□□□□ -1.15
ERCC3P19447 MITF-206ENST00000394351 1956 ntAPPRIS P3 TSL 1 (best) BASIC7.89□□□□□ -1.15
ERCC3P19447 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC7.89□□□□□ -1.15
ERCC3P19447 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
ERCC3P19447 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
ERCC3P19447 IL5RA-204ENST00000418488 5521 ntTSL 5 BASIC7.89□□□□□ -1.15
ERCC3P19447 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms