Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 ST13P12-201ENST00000508958 1094 ntBASIC4.71□□□□□ -1.66
CCL3L1P16619 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC4.71□□□□□ -1.66
CCL3L1P16619 AC074255.1-201ENST00000511259 501 ntBASIC4.71□□□□□ -1.66
CCL3L1P16619 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC4.71□□□□□ -1.66
CCL3L1P16619 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC4.71□□□□□ -1.66
CCL3L1P16619 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC4.71□□□□□ -1.66
CCL3L1P16619 TRIM51DP-201ENST00000529746 596 ntBASIC4.71□□□□□ -1.66
CCL3L1P16619 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC4.71□□□□□ -1.66
CCL3L1P16619 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC4.71□□□□□ -1.66
CCL3L1P16619 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC4.71□□□□□ -1.66
CCL3L1P16619 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC4.71□□□□□ -1.66
CCL3L1P16619 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC4.71□□□□□ -1.66
CCL3L1P16619 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC4.71□□□□□ -1.66
CCL3L1P16619 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC4.71□□□□□ -1.66
CCL3L1P16619 AC008521.2-201ENST00000591021 259 ntBASIC4.71□□□□□ -1.66
CCL3L1P16619 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC4.71□□□□□ -1.66
CCL3L1P16619 HIRAP1-201ENST00000605318 787 ntBASIC4.71□□□□□ -1.66
CCL3L1P16619 AC090607.5-201ENST00000615692 224 ntBASIC4.71□□□□□ -1.66
CCL3L1P16619 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC4.71□□□□□ -1.66
CCL3L1P16619 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
CCL3L1P16619 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
CCL3L1P16619 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CCL3L1P16619 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC4.71□□□□□ -1.66
CCL3L1P16619 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
CCL3L1P16619 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC4.71□□□□□ -1.66
CCL3L1P16619 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CCL3L1P16619 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC4.71□□□□□ -1.66
CCL3L1P16619 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC4.71□□□□□ -1.66
CCL3L1P16619 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC4.71□□□□□ -1.66
CCL3L1P16619 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC4.71□□□□□ -1.66
CCL3L1P16619 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CCL3L1P16619 BCORP1-203ENST00000513194 5093 ntBASIC4.71□□□□□ -1.66
CCL3L1P16619 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
CCL3L1P16619 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CCL3L1P16619 MRE11P1-201ENST00000464884 2127 ntBASIC4.7□□□□□ -1.66
CCL3L1P16619 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CCL3L1P16619 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
CCL3L1P16619 AP002512.4-202ENST00000641599 4530 ntBASIC4.7□□□□□ -1.66
CCL3L1P16619 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC4.7□□□□□ -1.66
CCL3L1P16619 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
CCL3L1P16619 MAPK10-270ENST00000641102 3538 ntBASIC4.7□□□□□ -1.66
CCL3L1P16619 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CCL3L1P16619 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC4.7□□□□□ -1.66
CCL3L1P16619 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CCL3L1P16619 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC4.7□□□□□ -1.66
CCL3L1P16619 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC4.7□□□□□ -1.66
CCL3L1P16619 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CCL3L1P16619 AC015689.2-201ENST00000528172 1738 ntBASIC4.7□□□□□ -1.66
CCL3L1P16619 AC104964.3-201ENST00000606115 2860 ntBASIC4.7□□□□□ -1.66
CCL3L1P16619 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC4.7□□□□□ -1.66
CCL3L1P16619 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CCL3L1P16619 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
CCL3L1P16619 RNA5SP394-201ENST00000364216 119 ntBASIC4.7□□□□□ -1.66
CCL3L1P16619 PPCS-201ENST00000372556 984 ntTSL 2 BASIC4.7□□□□□ -1.66
CCL3L1P16619 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
CCL3L1P16619 RNA5SP284-201ENST00000384547 118 ntBASIC4.7□□□□□ -1.66
CCL3L1P16619 RPL11P3-201ENST00000395256 523 ntBASIC4.7□□□□□ -1.66
CCL3L1P16619 RPS6P23-201ENST00000413224 722 ntBASIC4.7□□□□□ -1.66
CCL3L1P16619 EEF1B2P8-201ENST00000414101 671 ntBASIC4.7□□□□□ -1.66
CCL3L1P16619 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC4.7□□□□□ -1.66
CCL3L1P16619 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC4.7□□□□□ -1.66
CCL3L1P16619 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC4.7□□□□□ -1.66
CCL3L1P16619 BX119321.1-201ENST00000428912 797 ntBASIC4.7□□□□□ -1.66
CCL3L1P16619 AL022331.1-201ENST00000429025 477 ntBASIC4.7□□□□□ -1.66
CCL3L1P16619 AC079807.1-201ENST00000429993 481 ntBASIC4.7□□□□□ -1.66
CCL3L1P16619 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC4.7□□□□□ -1.66
CCL3L1P16619 RPS29P14-201ENST00000431518 171 ntBASIC4.7□□□□□ -1.66
CCL3L1P16619 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC4.7□□□□□ -1.66
CCL3L1P16619 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CCL3L1P16619 AL445665.1-202ENST00000452436 324 ntBASIC4.7□□□□□ -1.66
CCL3L1P16619 AC144530.1-201ENST00000452862 555 ntBASIC4.7□□□□□ -1.66
CCL3L1P16619 snoU13.29-201ENST00000459370 104 ntBASIC4.7□□□□□ -1.66
CCL3L1P16619 RN7SL570P-201ENST00000484405 292 ntBASIC4.7□□□□□ -1.66
CCL3L1P16619 AC073610.1-201ENST00000489971 396 ntBASIC4.7□□□□□ -1.66
CCL3L1P16619 OR7E157P-201ENST00000494376 911 ntBASIC4.7□□□□□ -1.66
CCL3L1P16619 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC4.7□□□□□ -1.66
CCL3L1P16619 AC022826.1-201ENST00000519383 805 ntBASIC4.7□□□□□ -1.66
CCL3L1P16619 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC4.7□□□□□ -1.66
CCL3L1P16619 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC4.7□□□□□ -1.66
CCL3L1P16619 HMGB1P42-201ENST00000532126 553 ntBASIC4.7□□□□□ -1.66
CCL3L1P16619 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC4.7□□□□□ -1.66
CCL3L1P16619 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC4.7□□□□□ -1.66
CCL3L1P16619 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC4.7□□□□□ -1.66
CCL3L1P16619 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC4.7□□□□□ -1.66
CCL3L1P16619 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC4.7□□□□□ -1.66
CCL3L1P16619 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC4.7□□□□□ -1.66
CCL3L1P16619 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC4.7□□□□□ -1.66
CCL3L1P16619 SUPT4H1-207ENST00000581540 668 ntTSL 2 BASIC4.7□□□□□ -1.66
CCL3L1P16619 AC060780.2-201ENST00000589047 198 ntBASIC4.7□□□□□ -1.66
CCL3L1P16619 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC4.7□□□□□ -1.66
CCL3L1P16619 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC4.7□□□□□ -1.66
CCL3L1P16619 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC4.7□□□□□ -1.66
CCL3L1P16619 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CCL3L1P16619 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC4.7□□□□□ -1.66
CCL3L1P16619 AL035661.1-201ENST00000620459 1144 ntBASIC4.7□□□□□ -1.66
CCL3L1P16619 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC4.7□□□□□ -1.66
CCL3L1P16619 AL390318.1-201ENST00000624564 687 ntBASIC4.7□□□□□ -1.66
CCL3L1P16619 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC4.7□□□□□ -1.66
CCL3L1P16619 MIR193BHG-214ENST00000641765 509 ntBASIC4.7□□□□□ -1.66
CCL3L1P16619 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms