Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 AC011840.5-201ENST00000582125 771 ntBASIC9.77□□□□□ -0.85
TOP2AP11388 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC9.77□□□□□ -0.85
TOP2AP11388 AC087783.2-201ENST00000605070 562 ntBASIC9.77□□□□□ -0.85
TOP2AP11388 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
TOP2AP11388 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC9.77□□□□□ -0.85
TOP2AP11388 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC9.77□□□□□ -0.85
TOP2AP11388 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC9.77□□□□□ -0.85
TOP2AP11388 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
TOP2AP11388 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
TOP2AP11388 AC022893.2-201ENST00000564832 3296 ntBASIC9.76□□□□□ -0.85
TOP2AP11388 CD109-203ENST00000437994 9401 ntAPPRIS ALT1 TSL 1 (best) BASIC9.76□□□□□ -0.85
TOP2AP11388 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
TOP2AP11388 GCNT1-202ENST00000442371 5972 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
TOP2AP11388 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
TOP2AP11388 GANC-201ENST00000318010 7781 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
TOP2AP11388 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
TOP2AP11388 ZSCAN12-201ENST00000361028 5495 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
TOP2AP11388 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
TOP2AP11388 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
TOP2AP11388 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
TOP2AP11388 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
TOP2AP11388 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
TOP2AP11388 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
TOP2AP11388 RNA5SP487-201ENST00000410186 122 ntBASIC9.76□□□□□ -0.85
TOP2AP11388 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
TOP2AP11388 VN1R21P-201ENST00000426703 765 ntBASIC9.76□□□□□ -0.85
TOP2AP11388 OSTCP1-201ENST00000455507 450 ntBASIC9.76□□□□□ -0.85
TOP2AP11388 RPS17P5-201ENST00000498293 408 ntBASIC9.76□□□□□ -0.85
TOP2AP11388 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC9.76□□□□□ -0.85
TOP2AP11388 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC9.76□□□□□ -0.85
TOP2AP11388 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC9.76□□□□□ -0.85
TOP2AP11388 MIR4646-201ENST00000580775 63 ntBASIC9.76□□□□□ -0.85
TOP2AP11388 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC9.76□□□□□ -0.85
TOP2AP11388 WWOX-217ENST00000620008 450 ntTSL 2 BASIC9.76□□□□□ -0.85
TOP2AP11388 AP002799.1-201ENST00000623552 423 ntBASIC9.76□□□□□ -0.85
TOP2AP11388 TBC1D30-204ENST00000542120 7433 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
TOP2AP11388 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
TOP2AP11388 CTNND1-204ENST00000361796 6226 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
TOP2AP11388 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC9.76□□□□□ -0.85
TOP2AP11388 ELP4-229ENST00000640961 8164 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
TOP2AP11388 URB1-201ENST00000382751 10832 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
TOP2AP11388 ZRANB1-201ENST00000359653 5695 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
TOP2AP11388 TRPM8-201ENST00000324695 5621 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
TOP2AP11388 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
TOP2AP11388 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC9.75□□□□□ -0.85
TOP2AP11388 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
TOP2AP11388 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
TOP2AP11388 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
TOP2AP11388 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC9.75□□□□□ -0.85
TOP2AP11388 AL162456.1-201ENST00000634535 2006 ntBASIC9.75□□□□□ -0.85
TOP2AP11388 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
TOP2AP11388 AL121835.1-201ENST00000404250 354 ntBASIC9.75□□□□□ -0.85
TOP2AP11388 RNU6ATAC7P-201ENST00000408111 127 ntBASIC9.75□□□□□ -0.85
TOP2AP11388 HNRNPA3P4-201ENST00000427514 803 ntBASIC9.75□□□□□ -0.85
TOP2AP11388 RBMY2QP-201ENST00000429799 1147 ntBASIC9.75□□□□□ -0.85
TOP2AP11388 PA2G4P6-201ENST00000438325 1197 ntBASIC9.75□□□□□ -0.85
TOP2AP11388 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC9.75□□□□□ -0.85
TOP2AP11388 RPS23P9-201ENST00000448848 438 ntBASIC9.75□□□□□ -0.85
TOP2AP11388 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC9.75□□□□□ -0.85
TOP2AP11388 RNA5SP228-201ENST00000516232 133 ntBASIC9.75□□□□□ -0.85
TOP2AP11388 AC024940.3-201ENST00000538551 316 ntBASIC9.75□□□□□ -0.85
TOP2AP11388 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC9.75□□□□□ -0.85
TOP2AP11388 DHFRP1-201ENST00000579682 559 ntBASIC9.75□□□□□ -0.85
TOP2AP11388 FAM25E-202ENST00000608562 189 ntBASIC9.75□□□□□ -0.85
TOP2AP11388 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC9.75□□□□□ -0.85
TOP2AP11388 GPNMB-201ENST00000258733 2862 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
TOP2AP11388 SYNPO2-202ENST00000429713 9920 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
TOP2AP11388 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC9.75□□□□□ -0.85
TOP2AP11388 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
TOP2AP11388 AP004607.3-201ENST00000530354 3915 ntBASIC9.74□□□□□ -0.85
TOP2AP11388 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
TOP2AP11388 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
TOP2AP11388 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
TOP2AP11388 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC9.74□□□□□ -0.85
TOP2AP11388 MMACHC-201ENST00000401061 5296 ntAPPRIS P1 TSL 2 BASIC9.74□□□□□ -0.85
TOP2AP11388 SNORA17.1-201ENST00000362945 126 ntBASIC9.74□□□□□ -0.85
TOP2AP11388 RNU1-146P-201ENST00000364015 165 ntBASIC9.74□□□□□ -0.85
TOP2AP11388 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
TOP2AP11388 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
TOP2AP11388 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
TOP2AP11388 FAM96AP1-201ENST00000430879 482 ntBASIC9.74□□□□□ -0.85
TOP2AP11388 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC9.74□□□□□ -0.85
TOP2AP11388 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC9.74□□□□□ -0.85
TOP2AP11388 AC109462.1-201ENST00000491087 368 ntBASIC9.74□□□□□ -0.85
TOP2AP11388 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC9.74□□□□□ -0.85
TOP2AP11388 RN7SKP99-201ENST00000517028 307 ntBASIC9.74□□□□□ -0.85
TOP2AP11388 OR5AZ1P-201ENST00000527448 943 ntBASIC9.74□□□□□ -0.85
TOP2AP11388 HNRNPCP1-201ENST00000556181 766 ntBASIC9.74□□□□□ -0.85
TOP2AP11388 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC9.74□□□□□ -0.85
TOP2AP11388 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC9.74□□□□□ -0.85
TOP2AP11388 AC009163.6-201ENST00000612367 342 ntBASIC9.74□□□□□ -0.85
TOP2AP11388 AC091953.3-201ENST00000623220 236 ntBASIC9.74□□□□□ -0.85
TOP2AP11388 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
TOP2AP11388 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC9.74□□□□□ -0.85
TOP2AP11388 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC9.74□□□□□ -0.85
TOP2AP11388 MFSD8-216ENST00000641147 4009 ntBASIC9.74□□□□□ -0.85
TOP2AP11388 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
TOP2AP11388 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
TOP2AP11388 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC9.74□□□□□ -0.85
TOP2AP11388 OLMALINC-203ENST00000641087 3779 ntBASIC9.74□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms