Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 OR4D12P-201ENST00000509361 911 ntBASIC5.25□□□□□ -1.57
SFTPBP07988 HMGN1P17-201ENST00000513734 295 ntBASIC5.25□□□□□ -1.57
SFTPBP07988 RNU6-751P-201ENST00000516382 101 ntBASIC5.25□□□□□ -1.57
SFTPBP07988 RNA5SP206-201ENST00000516703 121 ntBASIC5.25□□□□□ -1.57
SFTPBP07988 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.25□□□□□ -1.57
SFTPBP07988 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC5.25□□□□□ -1.57
SFTPBP07988 ODF1-202ENST00000518835 368 ntTSL 3 BASIC5.25□□□□□ -1.57
SFTPBP07988 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC5.25□□□□□ -1.57
SFTPBP07988 NPIPB14P-203ENST00000532298 987 ntBASIC5.25□□□□□ -1.57
SFTPBP07988 AP001858.2-201ENST00000536213 601 ntBASIC5.25□□□□□ -1.57
SFTPBP07988 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC5.25□□□□□ -1.57
SFTPBP07988 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC5.25□□□□□ -1.57
SFTPBP07988 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC5.25□□□□□ -1.57
SFTPBP07988 AC090888.3-201ENST00000558917 509 ntBASIC5.25□□□□□ -1.57
SFTPBP07988 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC5.25□□□□□ -1.57
SFTPBP07988 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SFTPBP07988 RNU4ATAC-201ENST00000580972 127 ntBASIC5.25□□□□□ -1.57
SFTPBP07988 FAM60CP-201ENST00000591086 664 ntBASIC5.25□□□□□ -1.57
SFTPBP07988 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC5.25□□□□□ -1.57
SFTPBP07988 AC079315.1-201ENST00000602952 623 ntBASIC5.25□□□□□ -1.57
SFTPBP07988 SNORA74.4-201ENST00000607595 199 ntBASIC5.25□□□□□ -1.57
SFTPBP07988 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC5.25□□□□□ -1.57
SFTPBP07988 MIR6811-201ENST00000620409 58 ntBASIC5.25□□□□□ -1.57
SFTPBP07988 AL137067.2-201ENST00000621202 131 ntBASIC5.25□□□□□ -1.57
SFTPBP07988 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.25□□□□□ -1.57
SFTPBP07988 AP000550.3-201ENST00000637734 379 ntBASIC5.25□□□□□ -1.57
SFTPBP07988 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
SFTPBP07988 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SFTPBP07988 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.25□□□□□ -1.57
SFTPBP07988 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
SFTPBP07988 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
SFTPBP07988 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SFTPBP07988 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC5.25□□□□□ -1.57
SFTPBP07988 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.25□□□□□ -1.57
SFTPBP07988 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SFTPBP07988 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SFTPBP07988 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.25□□□□□ -1.57
SFTPBP07988 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
SFTPBP07988 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SFTPBP07988 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.24□□□□□ -1.57
SFTPBP07988 CASC19-260ENST00000641828 2001 ntBASIC5.24□□□□□ -1.57
SFTPBP07988 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
SFTPBP07988 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SFTPBP07988 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SFTPBP07988 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.24□□□□□ -1.57
SFTPBP07988 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SFTPBP07988 MTCO1P8-201ENST00000416914 1523 ntBASIC5.24□□□□□ -1.57
SFTPBP07988 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SFTPBP07988 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
SFTPBP07988 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC5.24□□□□□ -1.57
SFTPBP07988 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
SFTPBP07988 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SFTPBP07988 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SFTPBP07988 AC024587.1-201ENST00000505925 2157 ntBASIC5.24□□□□□ -1.57
SFTPBP07988 RNU6-386P-201ENST00000362650 107 ntBASIC5.24□□□□□ -1.57
SFTPBP07988 RNU4-23P-201ENST00000362839 140 ntBASIC5.24□□□□□ -1.57
SFTPBP07988 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
SFTPBP07988 RNA5SP198-201ENST00000410376 127 ntBASIC5.24□□□□□ -1.57
SFTPBP07988 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC5.24□□□□□ -1.57
SFTPBP07988 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SFTPBP07988 ARAFP1-201ENST00000422172 605 ntBASIC5.24□□□□□ -1.57
SFTPBP07988 AC099782.1-201ENST00000425889 474 ntBASIC5.24□□□□□ -1.57
SFTPBP07988 AL590399.2-201ENST00000427536 309 ntBASIC5.24□□□□□ -1.57
SFTPBP07988 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.24□□□□□ -1.57
SFTPBP07988 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC5.24□□□□□ -1.57
SFTPBP07988 PPIAP10-201ENST00000438675 458 ntBASIC5.24□□□□□ -1.57
SFTPBP07988 RPSAP40-201ENST00000442343 891 ntBASIC5.24□□□□□ -1.57
SFTPBP07988 RPS10P18-201ENST00000442662 495 ntBASIC5.24□□□□□ -1.57
SFTPBP07988 AL133351.3-201ENST00000454998 193 ntBASIC5.24□□□□□ -1.57
SFTPBP07988 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC5.24□□□□□ -1.57
SFTPBP07988 AC098583.1-201ENST00000480875 255 ntBASIC5.24□□□□□ -1.57
SFTPBP07988 SNX18P24-201ENST00000505249 671 ntBASIC5.24□□□□□ -1.57
SFTPBP07988 KHDC1P1-201ENST00000511053 508 ntBASIC5.24□□□□□ -1.57
SFTPBP07988 ZNF519P4-201ENST00000514008 125 ntBASIC5.24□□□□□ -1.57
SFTPBP07988 CYP4F27P-201ENST00000514557 494 ntBASIC5.24□□□□□ -1.57
SFTPBP07988 AC008429.4-201ENST00000521201 182 ntBASIC5.24□□□□□ -1.57
SFTPBP07988 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC5.24□□□□□ -1.57
SFTPBP07988 AP001804.2-201ENST00000533932 910 ntBASIC5.24□□□□□ -1.57
SFTPBP07988 AC005000.1-201ENST00000536192 288 ntBASIC5.24□□□□□ -1.57
SFTPBP07988 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC5.24□□□□□ -1.57
SFTPBP07988 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC5.24□□□□□ -1.57
SFTPBP07988 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC5.24□□□□□ -1.57
SFTPBP07988 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SFTPBP07988 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC5.24□□□□□ -1.57
SFTPBP07988 SMIM12P1-201ENST00000603004 274 ntBASIC5.24□□□□□ -1.57
SFTPBP07988 AC004890.3-201ENST00000605566 1095 ntBASIC5.24□□□□□ -1.57
SFTPBP07988 AC093388.1-201ENST00000609166 430 ntBASIC5.24□□□□□ -1.57
SFTPBP07988 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC5.24□□□□□ -1.57
SFTPBP07988 MIR6071-201ENST00000616741 78 ntBASIC5.24□□□□□ -1.57
SFTPBP07988 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC5.24□□□□□ -1.57
SFTPBP07988 AL031595.2-201ENST00000624215 19071 ntBASIC5.24□□□□□ -1.57
SFTPBP07988 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
SFTPBP07988 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.24□□□□□ -1.57
SFTPBP07988 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.24□□□□□ -1.57
SFTPBP07988 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
SFTPBP07988 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SFTPBP07988 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.24□□□□□ -1.57
SFTPBP07988 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.24□□□□□ -1.57
SFTPBP07988 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SFTPBP07988 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms