Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CTSDP07339 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CTSDP07339 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CTSDP07339 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CTSDP07339 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CTSDP07339 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC4.8□□□□□ -1.64
CTSDP07339 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CTSDP07339 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CTSDP07339 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CTSDP07339 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC4.8□□□□□ -1.64
CTSDP07339 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC4.8□□□□□ -1.64
CTSDP07339 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC4.8□□□□□ -1.64
CTSDP07339 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CTSDP07339 AC117409.1-201ENST00000470499 1310 ntBASIC4.8□□□□□ -1.64
CTSDP07339 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC4.8□□□□□ -1.64
CTSDP07339 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CTSDP07339 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CTSDP07339 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CTSDP07339 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC4.8□□□□□ -1.64
CTSDP07339 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CTSDP07339 SNORA21-201ENST00000362423 132 ntBASIC4.8□□□□□ -1.64
CTSDP07339 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CTSDP07339 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
CTSDP07339 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CTSDP07339 AL133260.1-201ENST00000405720 405 ntBASIC4.8□□□□□ -1.64
CTSDP07339 AL139805.1-201ENST00000407837 289 ntBASIC4.8□□□□□ -1.64
CTSDP07339 GAS5-202ENST00000414075 413 ntTSL 2 BASIC4.8□□□□□ -1.64
CTSDP07339 AC017078.1-201ENST00000416146 368 ntBASIC4.8□□□□□ -1.64
CTSDP07339 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC4.8□□□□□ -1.64
CTSDP07339 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC4.8□□□□□ -1.64
CTSDP07339 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
CTSDP07339 AC023141.8-201ENST00000442554 208 ntBASIC4.8□□□□□ -1.64
CTSDP07339 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC4.8□□□□□ -1.64
CTSDP07339 AL590004.3-202ENST00000445883 451 ntBASIC4.8□□□□□ -1.64
CTSDP07339 FTLP8-201ENST00000446770 267 ntBASIC4.8□□□□□ -1.64
CTSDP07339 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC4.8□□□□□ -1.64
CTSDP07339 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC4.8□□□□□ -1.64
CTSDP07339 AC073476.1-201ENST00000452854 407 ntBASIC4.8□□□□□ -1.64
CTSDP07339 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC4.8□□□□□ -1.64
CTSDP07339 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC4.8□□□□□ -1.64
CTSDP07339 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC4.8□□□□□ -1.64
CTSDP07339 AC117500.1-201ENST00000497352 755 ntBASIC4.8□□□□□ -1.64
CTSDP07339 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC4.8□□□□□ -1.64
CTSDP07339 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC4.8□□□□□ -1.64
CTSDP07339 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC4.8□□□□□ -1.64
CTSDP07339 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC4.8□□□□□ -1.64
CTSDP07339 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CTSDP07339 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC4.8□□□□□ -1.64
CTSDP07339 BTG1P1-201ENST00000540396 508 ntBASIC4.8□□□□□ -1.64
CTSDP07339 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CTSDP07339 NELL2-211ENST00000548826 559 ntTSL 2 BASIC4.8□□□□□ -1.64
CTSDP07339 STARD6-202ENST00000577499 696 ntTSL 2 BASIC4.8□□□□□ -1.64
CTSDP07339 ARGFXP2-201ENST00000579304 949 ntBASIC4.8□□□□□ -1.64
CTSDP07339 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC4.8□□□□□ -1.64
CTSDP07339 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC4.8□□□□□ -1.64
CTSDP07339 AC011891.2-201ENST00000604949 397 ntBASIC4.8□□□□□ -1.64
CTSDP07339 AC145423.1-201ENST00000605712 336 ntBASIC4.8□□□□□ -1.64
CTSDP07339 AL139124.1-201ENST00000609123 421 ntBASIC4.8□□□□□ -1.64
CTSDP07339 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC4.8□□□□□ -1.64
CTSDP07339 AC015819.1-201ENST00000613588 663 ntBASIC4.8□□□□□ -1.64
CTSDP07339 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC4.8□□□□□ -1.64
CTSDP07339 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC4.8□□□□□ -1.64
CTSDP07339 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CTSDP07339 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CTSDP07339 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CTSDP07339 AC144833.1-201ENST00000567953 4089 ntBASIC4.8□□□□□ -1.64
CTSDP07339 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC4.8□□□□□ -1.64
CTSDP07339 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CTSDP07339 HSPD1P7-201ENST00000447985 1686 ntBASIC4.8□□□□□ -1.64
CTSDP07339 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CTSDP07339 USP40-202ENST00000409945 1946 ntTSL 2 BASIC4.8□□□□□ -1.64
CTSDP07339 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
CTSDP07339 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC4.8□□□□□ -1.64
CTSDP07339 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC4.79□□□□□ -1.64
CTSDP07339 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CTSDP07339 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CTSDP07339 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC4.79□□□□□ -1.64
CTSDP07339 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CTSDP07339 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC4.79□□□□□ -1.64
CTSDP07339 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
CTSDP07339 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CTSDP07339 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC4.79□□□□□ -1.64
CTSDP07339 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CTSDP07339 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC4.79□□□□□ -1.64
CTSDP07339 RNA5SP77-201ENST00000365394 120 ntBASIC4.79□□□□□ -1.64
CTSDP07339 U3.28-201ENST00000391249 210 ntBASIC4.79□□□□□ -1.64
CTSDP07339 PSMA6P1-201ENST00000400275 741 ntBASIC4.79□□□□□ -1.64
CTSDP07339 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CTSDP07339 RN7SKP146-201ENST00000410242 334 ntBASIC4.79□□□□□ -1.64
CTSDP07339 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC4.79□□□□□ -1.64
CTSDP07339 LINC00328-2P-201ENST00000436585 219 ntBASIC4.79□□□□□ -1.64
CTSDP07339 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC4.79□□□□□ -1.64
CTSDP07339 AC023245.1-201ENST00000468501 517 ntBASIC4.79□□□□□ -1.64
CTSDP07339 OR7E22P-201ENST00000478335 1035 ntBASIC4.79□□□□□ -1.64
CTSDP07339 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CTSDP07339 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC4.79□□□□□ -1.64
CTSDP07339 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CTSDP07339 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC4.79□□□□□ -1.64
CTSDP07339 CR383658.1-201ENST00000514609 734 ntBASIC4.79□□□□□ -1.64
CTSDP07339 SEPT10P1-201ENST00000517342 1162 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms