Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
TPM3P06753 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC6.47□□□□□ -1.37
TPM3P06753 AC027796.1-201ENST00000575593 512 ntBASIC6.47□□□□□ -1.37
TPM3P06753 AC006120.1-201ENST00000579375 546 ntBASIC6.47□□□□□ -1.37
TPM3P06753 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC6.47□□□□□ -1.37
TPM3P06753 ZNF677-211ENST00000601828 719 ntTSL 2 BASIC6.47□□□□□ -1.37
TPM3P06753 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC6.47□□□□□ -1.37
TPM3P06753 Z93930.3-201ENST00000607919 749 ntBASIC6.47□□□□□ -1.37
TPM3P06753 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC6.47□□□□□ -1.37
TPM3P06753 ICE2P1-201ENST00000512800 1849 ntBASIC6.47□□□□□ -1.37
TPM3P06753 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
TPM3P06753 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
TPM3P06753 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC6.47□□□□□ -1.37
TPM3P06753 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
TPM3P06753 AL603750.1-201ENST00000624216 1717 ntBASIC6.47□□□□□ -1.37
TPM3P06753 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
TPM3P06753 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC6.47□□□□□ -1.37
TPM3P06753 FBXL21-201ENST00000297158 1305 ntBASIC6.47□□□□□ -1.37
TPM3P06753 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC6.47□□□□□ -1.37
TPM3P06753 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
TPM3P06753 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC6.47□□□□□ -1.37
TPM3P06753 AC011933.2-201ENST00000578539 2790 ntBASIC6.46□□□□□ -1.37
TPM3P06753 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC6.46□□□□□ -1.37
TPM3P06753 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.37
TPM3P06753 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC6.46□□□□□ -1.37
TPM3P06753 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
TPM3P06753 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
TPM3P06753 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
TPM3P06753 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
TPM3P06753 AL132875.1-201ENST00000403623 949 ntBASIC6.46□□□□□ -1.38
TPM3P06753 AC130360.1-201ENST00000425489 1117 ntBASIC6.46□□□□□ -1.38
TPM3P06753 TCEA1P3-201ENST00000443005 880 ntBASIC6.46□□□□□ -1.38
TPM3P06753 AC002553.3-201ENST00000453002 341 ntBASIC6.46□□□□□ -1.38
TPM3P06753 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC6.46□□□□□ -1.38
TPM3P06753 PSAT1P4-201ENST00000466500 526 ntBASIC6.46□□□□□ -1.38
TPM3P06753 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC6.46□□□□□ -1.38
TPM3P06753 ENPP7P11-201ENST00000505915 627 ntBASIC6.46□□□□□ -1.38
TPM3P06753 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC6.46□□□□□ -1.38
TPM3P06753 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
TPM3P06753 AC130365.2-201ENST00000525882 1201 ntBASIC6.46□□□□□ -1.38
TPM3P06753 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
TPM3P06753 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC6.46□□□□□ -1.38
TPM3P06753 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC6.46□□□□□ -1.38
TPM3P06753 AC068726.1-201ENST00000610993 341 ntBASIC6.46□□□□□ -1.38
TPM3P06753 AC010632.3-201ENST00000611377 369 ntBASIC6.46□□□□□ -1.38
TPM3P06753 AC011755.1-201ENST00000623763 2049 ntBASIC6.46□□□□□ -1.38
TPM3P06753 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC6.46□□□□□ -1.38
TPM3P06753 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC6.46□□□□□ -1.38
TPM3P06753 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
TPM3P06753 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
TPM3P06753 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
TPM3P06753 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
TPM3P06753 MFSD8-239ENST00000641590 2479 ntBASIC6.45□□□□□ -1.38
TPM3P06753 MTCO1P28-201ENST00000574177 1528 ntBASIC6.45□□□□□ -1.38
TPM3P06753 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
TPM3P06753 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
TPM3P06753 OR9K1P-202ENST00000641111 3217 ntBASIC6.45□□□□□ -1.38
TPM3P06753 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
TPM3P06753 LEKR1-201ENST00000356539 2572 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
TPM3P06753 USP40-202ENST00000409945 1946 ntTSL 2 BASIC6.45□□□□□ -1.38
TPM3P06753 SNORA21-201ENST00000362423 132 ntBASIC6.45□□□□□ -1.38
TPM3P06753 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC6.45□□□□□ -1.38
TPM3P06753 SNRPEP6-201ENST00000407465 277 ntBASIC6.45□□□□□ -1.38
TPM3P06753 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
TPM3P06753 GAPDHP19-201ENST00000431768 1005 ntBASIC6.45□□□□□ -1.38
TPM3P06753 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC6.45□□□□□ -1.38
TPM3P06753 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC6.45□□□□□ -1.38
TPM3P06753 AC010240.2-201ENST00000445363 1205 ntBASIC6.45□□□□□ -1.38
TPM3P06753 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC6.45□□□□□ -1.38
TPM3P06753 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC6.45□□□□□ -1.38
TPM3P06753 RN7SL790P-201ENST00000474043 298 ntBASIC6.45□□□□□ -1.38
TPM3P06753 USP9YP2-201ENST00000504503 1000 ntBASIC6.45□□□□□ -1.38
TPM3P06753 USP9YP1-201ENST00000513521 1002 ntBASIC6.45□□□□□ -1.38
TPM3P06753 SNORA74.1-201ENST00000516320 180 ntBASIC6.45□□□□□ -1.38
TPM3P06753 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC6.45□□□□□ -1.38
TPM3P06753 NMNAT1P5-201ENST00000559657 841 ntBASIC6.45□□□□□ -1.38
TPM3P06753 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC6.45□□□□□ -1.38
TPM3P06753 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC6.45□□□□□ -1.38
TPM3P06753 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC6.45□□□□□ -1.38
TPM3P06753 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC6.45□□□□□ -1.38
TPM3P06753 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
TPM3P06753 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
TPM3P06753 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
TPM3P06753 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
TPM3P06753 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
TPM3P06753 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
TPM3P06753 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
TPM3P06753 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC6.44□□□□□ -1.38
TPM3P06753 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
TPM3P06753 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
TPM3P06753 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC6.44□□□□□ -1.38
TPM3P06753 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
TPM3P06753 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
TPM3P06753 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC6.44□□□□□ -1.38
TPM3P06753 GNL2P1-201ENST00000451274 2190 ntBASIC6.44□□□□□ -1.38
TPM3P06753 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
TPM3P06753 AP004607.3-201ENST00000530354 3915 ntBASIC6.44□□□□□ -1.38
TPM3P06753 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
TPM3P06753 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC6.44□□□□□ -1.38
TPM3P06753 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms