Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 RNU1-136P-201ENST00000384181 164 ntBASIC5.79□□□□□ -1.48
HLA-DQB2P05538 NENFP1-201ENST00000419476 466 ntBASIC5.79□□□□□ -1.48
HLA-DQB2P05538 RNGTTP1-201ENST00000420965 728 ntBASIC5.79□□□□□ -1.48
HLA-DQB2P05538 IPPKP1-201ENST00000422501 768 ntBASIC5.79□□□□□ -1.48
HLA-DQB2P05538 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC5.79□□□□□ -1.48
HLA-DQB2P05538 KCTD9P1-201ENST00000430462 1167 ntBASIC5.79□□□□□ -1.48
HLA-DQB2P05538 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC5.79□□□□□ -1.48
HLA-DQB2P05538 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
HLA-DQB2P05538 B4GALNT2P1-201ENST00000508857 307 ntBASIC5.79□□□□□ -1.48
HLA-DQB2P05538 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
HLA-DQB2P05538 SNORA81.2-201ENST00000516868 170 ntBASIC5.79□□□□□ -1.48
HLA-DQB2P05538 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC5.79□□□□□ -1.48
HLA-DQB2P05538 GNG2-208ENST00000554875 430 ntTSL 5 BASIC5.79□□□□□ -1.48
HLA-DQB2P05538 HNRNPCP1-201ENST00000556181 766 ntBASIC5.79□□□□□ -1.48
HLA-DQB2P05538 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.79□□□□□ -1.48
HLA-DQB2P05538 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.79□□□□□ -1.48
HLA-DQB2P05538 DHFRP1-201ENST00000579682 559 ntBASIC5.79□□□□□ -1.48
HLA-DQB2P05538 AC063977.5-201ENST00000601044 974 ntBASIC5.79□□□□□ -1.48
HLA-DQB2P05538 AC100767.2-201ENST00000604840 693 ntBASIC5.79□□□□□ -1.48
HLA-DQB2P05538 MIR6778-201ENST00000617912 73 ntBASIC5.79□□□□□ -1.48
HLA-DQB2P05538 AC021422.1-201ENST00000621212 473 ntBASIC5.79□□□□□ -1.48
HLA-DQB2P05538 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
HLA-DQB2P05538 AC000095.2-202ENST00000637415 154 ntBASIC5.79□□□□□ -1.48
HLA-DQB2P05538 AC087565.3-203ENST00000641018 837 ntBASIC5.79□□□□□ -1.48
HLA-DQB2P05538 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.79□□□□□ -1.48
HLA-DQB2P05538 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.79□□□□□ -1.48
HLA-DQB2P05538 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
HLA-DQB2P05538 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
HLA-DQB2P05538 AL161901.1-201ENST00000624954 3425 ntBASIC5.79□□□□□ -1.48
HLA-DQB2P05538 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
HLA-DQB2P05538 ACADSB-202ENST00000368869 1599 ntTSL 2 BASIC5.79□□□□□ -1.48
HLA-DQB2P05538 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
HLA-DQB2P05538 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HLA-DQB2P05538 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC5.79□□□□□ -1.48
HLA-DQB2P05538 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HLA-DQB2P05538 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.79□□□□□ -1.48
HLA-DQB2P05538 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HLA-DQB2P05538 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
HLA-DQB2P05538 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
HLA-DQB2P05538 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
HLA-DQB2P05538 AP000641.1-201ENST00000531988 1639 ntBASIC5.78□□□□□ -1.48
HLA-DQB2P05538 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HLA-DQB2P05538 AL137141.1-201ENST00000624622 4836 ntBASIC5.78□□□□□ -1.48
HLA-DQB2P05538 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HLA-DQB2P05538 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HLA-DQB2P05538 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
HLA-DQB2P05538 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
HLA-DQB2P05538 RNA5SP326-201ENST00000363209 110 ntBASIC5.78□□□□□ -1.48
HLA-DQB2P05538 HMGB1P20-201ENST00000402555 677 ntBASIC5.78□□□□□ -1.48
HLA-DQB2P05538 RPS3AP2-201ENST00000407190 754 ntBASIC5.78□□□□□ -1.48
HLA-DQB2P05538 RPS6P23-201ENST00000413224 722 ntBASIC5.78□□□□□ -1.48
HLA-DQB2P05538 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC5.78□□□□□ -1.48
HLA-DQB2P05538 AL022331.1-201ENST00000429025 477 ntBASIC5.78□□□□□ -1.48
HLA-DQB2P05538 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.78□□□□□ -1.48
HLA-DQB2P05538 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
HLA-DQB2P05538 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.78□□□□□ -1.48
HLA-DQB2P05538 AC115223.1-201ENST00000466377 870 ntBASIC5.78□□□□□ -1.48
HLA-DQB2P05538 AC106872.5-201ENST00000508856 1416 ntBASIC5.78□□□□□ -1.48
HLA-DQB2P05538 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.78□□□□□ -1.48
HLA-DQB2P05538 HMGB1P42-201ENST00000532126 553 ntBASIC5.78□□□□□ -1.48
HLA-DQB2P05538 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.78□□□□□ -1.48
HLA-DQB2P05538 AC137627.1-201ENST00000545761 289 ntBASIC5.78□□□□□ -1.48
HLA-DQB2P05538 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC5.78□□□□□ -1.48
HLA-DQB2P05538 AC090888.3-201ENST00000558917 509 ntBASIC5.78□□□□□ -1.48
HLA-DQB2P05538 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC5.78□□□□□ -1.48
HLA-DQB2P05538 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.78□□□□□ -1.48
HLA-DQB2P05538 AC093388.1-201ENST00000609166 430 ntBASIC5.78□□□□□ -1.48
HLA-DQB2P05538 AC090607.5-201ENST00000615692 224 ntBASIC5.78□□□□□ -1.48
HLA-DQB2P05538 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
HLA-DQB2P05538 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HLA-DQB2P05538 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.78□□□□□ -1.48
HLA-DQB2P05538 MRE11P1-201ENST00000464884 2127 ntBASIC5.78□□□□□ -1.48
HLA-DQB2P05538 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
HLA-DQB2P05538 AC140479.2-201ENST00000421567 3130 ntBASIC5.78□□□□□ -1.48
HLA-DQB2P05538 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
HLA-DQB2P05538 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HLA-DQB2P05538 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.48
HLA-DQB2P05538 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.77□□□□□ -1.49
HLA-DQB2P05538 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
HLA-DQB2P05538 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
HLA-DQB2P05538 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
HLA-DQB2P05538 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
HLA-DQB2P05538 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
HLA-DQB2P05538 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
HLA-DQB2P05538 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.77□□□□□ -1.49
HLA-DQB2P05538 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
HLA-DQB2P05538 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.77□□□□□ -1.49
HLA-DQB2P05538 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
HLA-DQB2P05538 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC5.77□□□□□ -1.49
HLA-DQB2P05538 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
HLA-DQB2P05538 AC023490.2-201ENST00000359859 470 ntBASIC5.77□□□□□ -1.49
HLA-DQB2P05538 RNA5SP394-201ENST00000364216 119 ntBASIC5.77□□□□□ -1.49
HLA-DQB2P05538 AC087752.1-201ENST00000391360 558 ntBASIC5.77□□□□□ -1.49
HLA-DQB2P05538 RN7SKP17-201ENST00000411242 351 ntBASIC5.77□□□□□ -1.49
HLA-DQB2P05538 AC096921.1-201ENST00000411661 375 ntBASIC5.77□□□□□ -1.49
HLA-DQB2P05538 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.77□□□□□ -1.49
HLA-DQB2P05538 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC5.77□□□□□ -1.49
HLA-DQB2P05538 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.77□□□□□ -1.49
HLA-DQB2P05538 RPS10P18-201ENST00000442662 495 ntBASIC5.77□□□□□ -1.49
HLA-DQB2P05538 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms