Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC6.39□□□□□ -1.39
CHRNA1P02708 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
CHRNA1P02708 AL022323.4-201ENST00000623980 13120 ntBASIC6.39□□□□□ -1.39
CHRNA1P02708 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
CHRNA1P02708 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
CHRNA1P02708 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
CHRNA1P02708 LINC02019-201ENST00000608605 2060 ntBASIC6.39□□□□□ -1.39
CHRNA1P02708 SNORD8-201ENST00000363915 110 ntBASIC6.39□□□□□ -1.39
CHRNA1P02708 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
CHRNA1P02708 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
CHRNA1P02708 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CHRNA1P02708 TNPO1P1-201ENST00000423641 1138 ntBASIC6.39□□□□□ -1.39
CHRNA1P02708 AL390119.1-201ENST00000440329 312 ntBASIC6.39□□□□□ -1.39
CHRNA1P02708 AC023141.8-201ENST00000442554 208 ntBASIC6.39□□□□□ -1.39
CHRNA1P02708 RN7SL515P-201ENST00000463999 297 ntBASIC6.39□□□□□ -1.39
CHRNA1P02708 RPL32P33-201ENST00000487023 394 ntBASIC6.39□□□□□ -1.39
CHRNA1P02708 CYP4F27P-201ENST00000514557 494 ntBASIC6.39□□□□□ -1.39
CHRNA1P02708 AC021678.3-201ENST00000517893 476 ntBASIC6.39□□□□□ -1.39
CHRNA1P02708 AC139365.2-201ENST00000517972 253 ntBASIC6.39□□□□□ -1.39
CHRNA1P02708 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC6.39□□□□□ -1.39
CHRNA1P02708 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC6.39□□□□□ -1.39
CHRNA1P02708 HMGN2P47-201ENST00000559378 272 ntBASIC6.39□□□□□ -1.39
CHRNA1P02708 MIR4260-201ENST00000583107 67 ntBASIC6.39□□□□□ -1.39
CHRNA1P02708 AC011497.2-201ENST00000600255 639 ntBASIC6.39□□□□□ -1.39
CHRNA1P02708 SUMO2P15-201ENST00000604285 278 ntBASIC6.39□□□□□ -1.39
CHRNA1P02708 AL359513.1-201ENST00000614364 557 ntBASIC6.39□□□□□ -1.39
CHRNA1P02708 AC007204.2-201ENST00000615022 616 ntBASIC6.39□□□□□ -1.39
CHRNA1P02708 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC6.39□□□□□ -1.39
CHRNA1P02708 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CHRNA1P02708 AC011504.1-201ENST00000623331 4103 ntBASIC6.39□□□□□ -1.39
CHRNA1P02708 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CHRNA1P02708 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CHRNA1P02708 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CHRNA1P02708 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CHRNA1P02708 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC6.39□□□□□ -1.39
CHRNA1P02708 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CHRNA1P02708 AL353763.1-201ENST00000624467 1628 ntBASIC6.39□□□□□ -1.39
CHRNA1P02708 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CHRNA1P02708 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CHRNA1P02708 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
CHRNA1P02708 AC123769.1-201ENST00000530992 3192 ntBASIC6.39□□□□□ -1.39
CHRNA1P02708 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC6.38□□□□□ -1.39
CHRNA1P02708 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CHRNA1P02708 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.38□□□□□ -1.39
CHRNA1P02708 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CHRNA1P02708 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC6.38□□□□□ -1.39
CHRNA1P02708 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
CHRNA1P02708 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CHRNA1P02708 AL121768.1-201ENST00000613917 2544 ntBASIC6.38□□□□□ -1.39
CHRNA1P02708 AC007114.2-201ENST00000576014 4281 ntBASIC6.38□□□□□ -1.39
CHRNA1P02708 DPY19L1P1-201ENST00000417811 2594 ntBASIC6.38□□□□□ -1.39
CHRNA1P02708 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
CHRNA1P02708 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CHRNA1P02708 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC6.38□□□□□ -1.39
CHRNA1P02708 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.38□□□□□ -1.39
CHRNA1P02708 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.38□□□□□ -1.39
CHRNA1P02708 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CHRNA1P02708 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CHRNA1P02708 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
CHRNA1P02708 AL159987.1-201ENST00000347911 293 ntBASIC6.38□□□□□ -1.39
CHRNA1P02708 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
CHRNA1P02708 OR2W4P-201ENST00000406496 926 ntBASIC6.38□□□□□ -1.39
CHRNA1P02708 AL357752.1-201ENST00000412817 349 ntBASIC6.38□□□□□ -1.39
CHRNA1P02708 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC6.38□□□□□ -1.39
CHRNA1P02708 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC6.38□□□□□ -1.39
CHRNA1P02708 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC6.38□□□□□ -1.39
CHRNA1P02708 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC6.38□□□□□ -1.39
CHRNA1P02708 AC079922.1-201ENST00000443291 359 ntBASIC6.38□□□□□ -1.39
CHRNA1P02708 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CHRNA1P02708 AL133445.1-201ENST00000467051 452 ntBASIC6.38□□□□□ -1.39
CHRNA1P02708 RN7SL799P-201ENST00000475891 298 ntBASIC6.38□□□□□ -1.39
CHRNA1P02708 PPP1R11P1-201ENST00000486095 376 ntBASIC6.38□□□□□ -1.39
CHRNA1P02708 RNA5SP34-201ENST00000516887 130 ntBASIC6.38□□□□□ -1.39
CHRNA1P02708 SUMO2P19-201ENST00000518920 295 ntBASIC6.38□□□□□ -1.39
CHRNA1P02708 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC6.38□□□□□ -1.39
CHRNA1P02708 SMARCE1P3-201ENST00000553649 1231 ntBASIC6.38□□□□□ -1.39
CHRNA1P02708 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC6.38□□□□□ -1.39
CHRNA1P02708 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC6.38□□□□□ -1.39
CHRNA1P02708 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CHRNA1P02708 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC6.38□□□□□ -1.39
CHRNA1P02708 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC6.38□□□□□ -1.39
CHRNA1P02708 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC6.38□□□□□ -1.39
CHRNA1P02708 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC6.38□□□□□ -1.39
CHRNA1P02708 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC6.38□□□□□ -1.39
CHRNA1P02708 AC069234.4-201ENST00000621276 412 ntBASIC6.38□□□□□ -1.39
CHRNA1P02708 AC007683.2-201ENST00000624681 714 ntBASIC6.38□□□□□ -1.39
CHRNA1P02708 CCT5-215ENST00000625723 135 ntTSL 5 BASIC6.38□□□□□ -1.39
CHRNA1P02708 AC235565.1-201ENST00000456962 1325 ntBASIC6.38□□□□□ -1.39
CHRNA1P02708 SAMMSON-210ENST00000641260 1308 ntBASIC6.38□□□□□ -1.39
CHRNA1P02708 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC6.38□□□□□ -1.39
CHRNA1P02708 GTF2IP4-201ENST00000453092 2054 ntBASIC6.38□□□□□ -1.39
CHRNA1P02708 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
CHRNA1P02708 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC6.38□□□□□ -1.39
CHRNA1P02708 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CHRNA1P02708 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.37□□□□□ -1.39
CHRNA1P02708 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CHRNA1P02708 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CHRNA1P02708 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
CHRNA1P02708 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
CHRNA1P02708 ZNF402P-201ENST00000404435 3100 ntBASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms