Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.49
KRT6AP02538 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.49
KRT6AP02538 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
KRT6AP02538 AL035422.1-201ENST00000414193 397 ntBASIC5.71□□□□□ -1.5
KRT6AP02538 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC5.71□□□□□ -1.5
KRT6AP02538 HMGN2P27-201ENST00000427352 270 ntBASIC5.71□□□□□ -1.5
KRT6AP02538 CRIP1P1-201ENST00000427567 185 ntBASIC5.71□□□□□ -1.5
KRT6AP02538 AC108479.1-201ENST00000431142 427 ntBASIC5.71□□□□□ -1.5
KRT6AP02538 AL445928.1-201ENST00000435545 222 ntBASIC5.71□□□□□ -1.5
KRT6AP02538 AC096775.1-201ENST00000437724 448 ntBASIC5.71□□□□□ -1.5
KRT6AP02538 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC5.71□□□□□ -1.5
KRT6AP02538 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC5.71□□□□□ -1.5
KRT6AP02538 HMGB1P7-201ENST00000450921 612 ntBASIC5.71□□□□□ -1.5
KRT6AP02538 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC5.71□□□□□ -1.5
KRT6AP02538 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
KRT6AP02538 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.71□□□□□ -1.5
KRT6AP02538 RPL38P3-201ENST00000484463 213 ntBASIC5.71□□□□□ -1.5
KRT6AP02538 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC5.71□□□□□ -1.5
KRT6AP02538 AC112184.1-201ENST00000505179 312 ntBASIC5.71□□□□□ -1.5
KRT6AP02538 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.71□□□□□ -1.5
KRT6AP02538 MIR2117-201ENST00000516780 80 ntBASIC5.71□□□□□ -1.5
KRT6AP02538 AC138832.1-201ENST00000522871 556 ntBASIC5.71□□□□□ -1.5
KRT6AP02538 FAU-203ENST00000525297 355 ntTSL 5 BASIC5.71□□□□□ -1.5
KRT6AP02538 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC5.71□□□□□ -1.5
KRT6AP02538 RAB30-209ENST00000532548 644 ntTSL 3 BASIC5.71□□□□□ -1.5
KRT6AP02538 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC5.71□□□□□ -1.5
KRT6AP02538 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.71□□□□□ -1.5
KRT6AP02538 AC007066.2-202ENST00000566531 914 ntBASIC5.71□□□□□ -1.5
KRT6AP02538 AC090826.1-203ENST00000569235 490 ntBASIC5.71□□□□□ -1.5
KRT6AP02538 AC090286.3-201ENST00000573133 187 ntBASIC5.71□□□□□ -1.5
KRT6AP02538 AC004232.2-201ENST00000574245 821 ntBASIC5.71□□□□□ -1.5
KRT6AP02538 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC5.71□□□□□ -1.5
KRT6AP02538 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.71□□□□□ -1.5
KRT6AP02538 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC5.71□□□□□ -1.5
KRT6AP02538 AC005479.3-201ENST00000602790 431 ntBASIC5.71□□□□□ -1.5
KRT6AP02538 AC073333.2-201ENST00000603589 769 ntBASIC5.71□□□□□ -1.5
KRT6AP02538 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC5.71□□□□□ -1.5
KRT6AP02538 AL133481.2-203ENST00000607558 139 ntBASIC5.71□□□□□ -1.5
KRT6AP02538 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC5.71□□□□□ -1.5
KRT6AP02538 AC073488.6-201ENST00000632293 754 ntBASIC5.71□□□□□ -1.5
KRT6AP02538 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.71□□□□□ -1.5
KRT6AP02538 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.71□□□□□ -1.5
KRT6AP02538 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.71□□□□□ -1.5
KRT6AP02538 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
KRT6AP02538 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
KRT6AP02538 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
KRT6AP02538 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
KRT6AP02538 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
KRT6AP02538 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
KRT6AP02538 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.7□□□□□ -1.5
KRT6AP02538 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
KRT6AP02538 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
KRT6AP02538 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
KRT6AP02538 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
KRT6AP02538 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
KRT6AP02538 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
KRT6AP02538 RNA5SP279-201ENST00000365513 117 ntBASIC5.7□□□□□ -1.5
KRT6AP02538 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
KRT6AP02538 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
KRT6AP02538 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
KRT6AP02538 YWHAZP6-201ENST00000399764 738 ntBASIC5.7□□□□□ -1.5
KRT6AP02538 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC5.7□□□□□ -1.5
KRT6AP02538 METTL15P3-201ENST00000415522 1221 ntBASIC5.7□□□□□ -1.5
KRT6AP02538 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.7□□□□□ -1.5
KRT6AP02538 RPSAP65-201ENST00000429660 595 ntBASIC5.7□□□□□ -1.5
KRT6AP02538 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC5.7□□□□□ -1.5
KRT6AP02538 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC5.7□□□□□ -1.5
KRT6AP02538 RBMY2AP-201ENST00000445405 1157 ntBASIC5.7□□□□□ -1.5
KRT6AP02538 AL445466.1-201ENST00000448432 357 ntBASIC5.7□□□□□ -1.5
KRT6AP02538 RBMY2CP-201ENST00000448575 1157 ntBASIC5.7□□□□□ -1.5
KRT6AP02538 RBMY2DP-202ENST00000448881 1157 ntBASIC5.7□□□□□ -1.5
KRT6AP02538 FRG2FP-204ENST00000453982 852 ntBASIC5.7□□□□□ -1.5
KRT6AP02538 PDCL3P4-201ENST00000489621 720 ntBASIC5.7□□□□□ -1.5
KRT6AP02538 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
KRT6AP02538 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC5.7□□□□□ -1.5
KRT6AP02538 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.7□□□□□ -1.5
KRT6AP02538 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.7□□□□□ -1.5
KRT6AP02538 AP001357.1-201ENST00000586304 1053 ntBASIC5.7□□□□□ -1.5
KRT6AP02538 AL513327.3-201ENST00000602618 469 ntBASIC5.7□□□□□ -1.5
KRT6AP02538 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC5.7□□□□□ -1.5
KRT6AP02538 AC073488.3-201ENST00000631611 778 ntBASIC5.7□□□□□ -1.5
KRT6AP02538 5S_rRNA.29-201ENST00000641250 107 ntBASIC5.7□□□□□ -1.5
KRT6AP02538 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
KRT6AP02538 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
KRT6AP02538 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
KRT6AP02538 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.7□□□□□ -1.5
KRT6AP02538 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
KRT6AP02538 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
KRT6AP02538 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
KRT6AP02538 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
KRT6AP02538 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
KRT6AP02538 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
KRT6AP02538 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.69□□□□□ -1.5
KRT6AP02538 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC5.69□□□□□ -1.5
KRT6AP02538 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.69□□□□□ -1.5
KRT6AP02538 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
KRT6AP02538 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
KRT6AP02538 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
KRT6AP02538 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
KRT6AP02538 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms