Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC6.05□□□□□ -1.44
SMAD6O43541 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC6.05□□□□□ -1.44
SMAD6O43541 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC6.05□□□□□ -1.44
SMAD6O43541 VN1R48P-201ENST00000448149 1036 ntBASIC6.05□□□□□ -1.44
SMAD6O43541 GAS5-218ENST00000448718 565 ntTSL 2 BASIC6.05□□□□□ -1.44
SMAD6O43541 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC6.05□□□□□ -1.44
SMAD6O43541 RPL7L1P3-201ENST00000455249 689 ntBASIC6.05□□□□□ -1.44
SMAD6O43541 ACA64.4-201ENST00000459070 127 ntBASIC6.05□□□□□ -1.44
SMAD6O43541 UBFD1P1-201ENST00000473259 814 ntBASIC6.05□□□□□ -1.44
SMAD6O43541 AC104629.1-201ENST00000494226 508 ntBASIC6.05□□□□□ -1.44
SMAD6O43541 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6.05□□□□□ -1.44
SMAD6O43541 CYP4F27P-201ENST00000514557 494 ntBASIC6.05□□□□□ -1.44
SMAD6O43541 IGHVIII-47-1-201ENST00000518187 331 ntBASIC6.05□□□□□ -1.44
SMAD6O43541 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC6.05□□□□□ -1.44
SMAD6O43541 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
SMAD6O43541 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC6.05□□□□□ -1.44
SMAD6O43541 OR7E158P-201ENST00000524483 910 ntBASIC6.05□□□□□ -1.44
SMAD6O43541 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC6.05□□□□□ -1.44
SMAD6O43541 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC6.05□□□□□ -1.44
SMAD6O43541 AL356801.1-201ENST00000559320 294 ntBASIC6.05□□□□□ -1.44
SMAD6O43541 MIR132-201ENST00000591554 101 ntBASIC6.05□□□□□ -1.44
SMAD6O43541 AC004890.3-201ENST00000605566 1095 ntBASIC6.05□□□□□ -1.44
SMAD6O43541 AP005431.1-201ENST00000618479 319 ntBASIC6.05□□□□□ -1.44
SMAD6O43541 AC023510.2-201ENST00000622162 746 ntBASIC6.05□□□□□ -1.44
SMAD6O43541 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
SMAD6O43541 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC6.05□□□□□ -1.44
SMAD6O43541 AC091948.2-201ENST00000636510 279 ntBASIC6.05□□□□□ -1.44
SMAD6O43541 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC6.05□□□□□ -1.44
SMAD6O43541 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC6.05□□□□□ -1.44
SMAD6O43541 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC6.05□□□□□ -1.44
SMAD6O43541 GDA-209ENST00000545168 5362 ntTSL 2 BASIC6.05□□□□□ -1.44
SMAD6O43541 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SMAD6O43541 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC6.05□□□□□ -1.44
SMAD6O43541 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
SMAD6O43541 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.05□□□□□ -1.44
SMAD6O43541 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
SMAD6O43541 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SMAD6O43541 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.05□□□□□ -1.44
SMAD6O43541 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SMAD6O43541 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
SMAD6O43541 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
SMAD6O43541 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.05□□□□□ -1.44
SMAD6O43541 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC6.04□□□□□ -1.44
SMAD6O43541 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.04□□□□□ -1.44
SMAD6O43541 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.04□□□□□ -1.44
SMAD6O43541 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
SMAD6O43541 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
SMAD6O43541 AC022417.1-201ENST00000624768 1303 ntBASIC6.04□□□□□ -1.44
SMAD6O43541 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SMAD6O43541 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SMAD6O43541 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SMAD6O43541 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SMAD6O43541 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
SMAD6O43541 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
SMAD6O43541 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
SMAD6O43541 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC6.04□□□□□ -1.44
SMAD6O43541 AC015977.1-201ENST00000418887 292 ntBASIC6.04□□□□□ -1.44
SMAD6O43541 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SMAD6O43541 AL445928.1-201ENST00000435545 222 ntBASIC6.04□□□□□ -1.44
SMAD6O43541 TUBB4BP6-201ENST00000437576 479 ntBASIC6.04□□□□□ -1.44
SMAD6O43541 RPS12P17-201ENST00000438591 377 ntBASIC6.04□□□□□ -1.44
SMAD6O43541 GXYLT1P1-201ENST00000446657 490 ntBASIC6.04□□□□□ -1.44
SMAD6O43541 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC6.04□□□□□ -1.44
SMAD6O43541 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SMAD6O43541 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC6.04□□□□□ -1.44
SMAD6O43541 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
SMAD6O43541 OTX2-203ENST00000554559 715 ntTSL 5 BASIC6.04□□□□□ -1.44
SMAD6O43541 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC6.04□□□□□ -1.44
SMAD6O43541 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC6.04□□□□□ -1.44
SMAD6O43541 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC6.04□□□□□ -1.44
SMAD6O43541 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC6.04□□□□□ -1.44
SMAD6O43541 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC6.04□□□□□ -1.44
SMAD6O43541 AC004223.2-201ENST00000590309 544 ntBASIC6.04□□□□□ -1.44
SMAD6O43541 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC6.04□□□□□ -1.44
SMAD6O43541 CLIC4P2-201ENST00000601934 717 ntBASIC6.04□□□□□ -1.44
SMAD6O43541 AC003001.2-201ENST00000616294 831 ntBASIC6.04□□□□□ -1.44
SMAD6O43541 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC6.04□□□□□ -1.44
SMAD6O43541 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.04□□□□□ -1.44
SMAD6O43541 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
SMAD6O43541 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SMAD6O43541 HSPD1P8-201ENST00000400121 1658 ntBASIC6.04□□□□□ -1.44
SMAD6O43541 PARP4P2-201ENST00000446672 3326 ntBASIC6.04□□□□□ -1.44
SMAD6O43541 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC6.04□□□□□ -1.44
SMAD6O43541 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
SMAD6O43541 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SMAD6O43541 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
SMAD6O43541 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SMAD6O43541 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
SMAD6O43541 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SMAD6O43541 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
SMAD6O43541 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SMAD6O43541 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SMAD6O43541 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SMAD6O43541 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SMAD6O43541 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SMAD6O43541 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SMAD6O43541 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SMAD6O43541 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
SMAD6O43541 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SMAD6O43541 RNA5SP500-201ENST00000364486 119 ntBASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms