Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
CUX2O14529 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
CUX2O14529 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC9.89□□□□□ -0.83
CUX2O14529 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
CUX2O14529 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
CUX2O14529 HLF-210ENST00000575345 3589 ntTSL 2 BASIC9.88□□□□□ -0.83
CUX2O14529 ALG13-224ENST00000610588 4175 ntTSL 2 BASIC9.88□□□□□ -0.83
CUX2O14529 AC092692.1-201ENST00000623625 2595 ntBASIC9.88□□□□□ -0.83
CUX2O14529 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC9.88□□□□□ -0.83
CUX2O14529 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC9.88□□□□□ -0.83
CUX2O14529 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC9.88□□□□□ -0.83
CUX2O14529 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
CUX2O14529 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
CUX2O14529 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
CUX2O14529 RNA5SP505-201ENST00000364748 108 ntBASIC9.88□□□□□ -0.83
CUX2O14529 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
CUX2O14529 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC9.88□□□□□ -0.83
CUX2O14529 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC9.88□□□□□ -0.83
CUX2O14529 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC9.88□□□□□ -0.83
CUX2O14529 AC012616.1-201ENST00000600294 197 ntBASIC9.88□□□□□ -0.83
CUX2O14529 AC090527.3-201ENST00000619041 548 ntBASIC9.88□□□□□ -0.83
CUX2O14529 WWOX-217ENST00000620008 450 ntTSL 2 BASIC9.88□□□□□ -0.83
CUX2O14529 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
CUX2O14529 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
CUX2O14529 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC9.88□□□□□ -0.83
CUX2O14529 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC9.88□□□□□ -0.83
CUX2O14529 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
CUX2O14529 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC9.87□□□□□ -0.83
CUX2O14529 CDH12-201ENST00000382254 4164 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
CUX2O14529 ECT2-206ENST00000417960 4363 ntAPPRIS ALT1 TSL 1 (best) BASIC9.87□□□□□ -0.83
CUX2O14529 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
CUX2O14529 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
CUX2O14529 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC9.87□□□□□ -0.83
CUX2O14529 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC9.87□□□□□ -0.83
CUX2O14529 RPL18P10-201ENST00000425606 538 ntBASIC9.87□□□□□ -0.83
CUX2O14529 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC9.87□□□□□ -0.83
CUX2O14529 VDAC2P4-201ENST00000452925 711 ntBASIC9.87□□□□□ -0.83
CUX2O14529 BZW1P1-201ENST00000454901 1240 ntBASIC9.87□□□□□ -0.83
CUX2O14529 AC022034.3-201ENST00000471393 478 ntBASIC9.87□□□□□ -0.83
CUX2O14529 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
CUX2O14529 RPL32P33-201ENST00000487023 394 ntBASIC9.87□□□□□ -0.83
CUX2O14529 RPL21P129-201ENST00000491732 478 ntBASIC9.87□□□□□ -0.83
CUX2O14529 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC9.87□□□□□ -0.83
CUX2O14529 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC9.87□□□□□ -0.83
CUX2O14529 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC9.87□□□□□ -0.83
CUX2O14529 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC9.87□□□□□ -0.83
CUX2O14529 AL021368.3-201ENST00000607119 578 ntBASIC9.87□□□□□ -0.83
CUX2O14529 AL161616.1-201ENST00000611867 286 ntBASIC9.87□□□□□ -0.83
CUX2O14529 uc_338.26-201ENST00000612659 160 ntBASIC9.87□□□□□ -0.83
CUX2O14529 AL118522.2-201ENST00000616045 615 ntBASIC9.87□□□□□ -0.83
CUX2O14529 ZNF101P1-201ENST00000435701 1720 ntBASIC9.87□□□□□ -0.83
CUX2O14529 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
CUX2O14529 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
CUX2O14529 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC9.87□□□□□ -0.83
CUX2O14529 PPM1L-205ENST00000498165 10934 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
CUX2O14529 TTC7B-201ENST00000328459 19458 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
CUX2O14529 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC9.87□□□□□ -0.83
CUX2O14529 MED13L-201ENST00000281928 14234 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
CUX2O14529 UFL1-201ENST00000369278 4224 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
CUX2O14529 SLC30A8-205ENST00000519688 5242 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
CUX2O14529 GGCX-201ENST00000233838 7569 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
CUX2O14529 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
CUX2O14529 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC9.86□□□□□ -0.83
CUX2O14529 RNA5SP211-201ENST00000365516 117 ntBASIC9.86□□□□□ -0.83
CUX2O14529 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC9.86□□□□□ -0.83
CUX2O14529 KCTD10P1-201ENST00000434203 625 ntBASIC9.86□□□□□ -0.83
CUX2O14529 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC9.86□□□□□ -0.83
CUX2O14529 PPM1AP1-201ENST00000502740 1135 ntBASIC9.86□□□□□ -0.83
CUX2O14529 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC9.86□□□□□ -0.83
CUX2O14529 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC9.86□□□□□ -0.83
CUX2O14529 MIR4284-201ENST00000578924 81 ntBASIC9.86□□□□□ -0.83
CUX2O14529 AC145423.1-201ENST00000605712 336 ntBASIC9.86□□□□□ -0.83
CUX2O14529 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC9.86□□□□□ -0.83
CUX2O14529 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC9.86□□□□□ -0.83
CUX2O14529 AC106886.5-201ENST00000380361 11692 ntAPPRIS P1 TSL 2 BASIC9.86□□□□□ -0.83
CUX2O14529 MMACHC-201ENST00000401061 5296 ntAPPRIS P1 TSL 2 BASIC9.86□□□□□ -0.83
CUX2O14529 TMEM192-201ENST00000306480 10012 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
CUX2O14529 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
CUX2O14529 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
CUX2O14529 CDY5P-201ENST00000411487 1580 ntBASIC9.86□□□□□ -0.83
CUX2O14529 CDY9P-201ENST00000451397 1580 ntBASIC9.86□□□□□ -0.83
CUX2O14529 SZT2-210ENST00000634258 11045 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
CUX2O14529 ABCA11P-202ENST00000504019 2110 ntBASIC9.86□□□□□ -0.83
CUX2O14529 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
CUX2O14529 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
CUX2O14529 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC9.86□□□□□ -0.83
CUX2O14529 UTY-213ENST00000612274 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
CUX2O14529 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
CUX2O14529 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
CUX2O14529 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
CUX2O14529 AL159987.1-201ENST00000347911 293 ntBASIC9.85□□□□□ -0.83
CUX2O14529 RNA5SP388-201ENST00000362584 119 ntBASIC9.85□□□□□ -0.83
CUX2O14529 SSX3-202ENST00000376893 800 ntTSL 2 BASIC9.85□□□□□ -0.83
CUX2O14529 RNA5SP91-201ENST00000390902 119 ntBASIC9.85□□□□□ -0.83
CUX2O14529 AL049693.1-201ENST00000402760 611 ntBASIC9.85□□□□□ -0.83
CUX2O14529 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC9.85□□□□□ -0.83
CUX2O14529 AL357752.1-201ENST00000412817 349 ntBASIC9.85□□□□□ -0.83
CUX2O14529 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC9.85□□□□□ -0.83
CUX2O14529 RN7SKP98-201ENST00000517070 156 ntBASIC9.85□□□□□ -0.83
CUX2O14529 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC9.85□□□□□ -0.83
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms