Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 AC073857.1-201ENST00000625082 1054 ntBASIC3.07□□□□□ -1.92
CHKB-CPT1BH3BT56 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CHKB-CPT1BH3BT56 CASC19-222ENST00000641321 1173 ntBASIC3.07□□□□□ -1.92
CHKB-CPT1BH3BT56 BCLAF1P2-201ENST00000624956 2609 ntBASIC3.07□□□□□ -1.92
CHKB-CPT1BH3BT56 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC3.07□□□□□ -1.92
CHKB-CPT1BH3BT56 CR383656.5-201ENST00000547616 1340 ntBASIC3.07□□□□□ -1.92
CHKB-CPT1BH3BT56 C15orf41-214ENST00000569302 1325 ntAPPRIS ALT1 TSL 5 BASIC3.07□□□□□ -1.92
CHKB-CPT1BH3BT56 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CHKB-CPT1BH3BT56 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC3.07□□□□□ -1.92
CHKB-CPT1BH3BT56 BMPR1APS1-201ENST00000403332 1598 ntBASIC3.07□□□□□ -1.92
CHKB-CPT1BH3BT56 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
CHKB-CPT1BH3BT56 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC3.07□□□□□ -1.92
CHKB-CPT1BH3BT56 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CHKB-CPT1BH3BT56 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CHKB-CPT1BH3BT56 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CHKB-CPT1BH3BT56 GNRH1-201ENST00000276414 1760 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CHKB-CPT1BH3BT56 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC3.07□□□□□ -1.92
CHKB-CPT1BH3BT56 NUCB2-201ENST00000323688 1905 ntAPPRIS ALT1 TSL 2 BASIC3.07□□□□□ -1.92
CHKB-CPT1BH3BT56 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC3.07□□□□□ -1.92
CHKB-CPT1BH3BT56 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CHKB-CPT1BH3BT56 SALL4P2-201ENST00000423288 2910 ntBASIC3.06□□□□□ -1.92
CHKB-CPT1BH3BT56 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
CHKB-CPT1BH3BT56 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC3.06□□□□□ -1.92
CHKB-CPT1BH3BT56 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CHKB-CPT1BH3BT56 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC3.06□□□□□ -1.92
CHKB-CPT1BH3BT56 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC3.06□□□□□ -1.92
CHKB-CPT1BH3BT56 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CHKB-CPT1BH3BT56 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
CHKB-CPT1BH3BT56 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.06□□□□□ -1.92
CHKB-CPT1BH3BT56 AFP-201ENST00000226359 1914 ntTSL 5 BASIC3.06□□□□□ -1.92
CHKB-CPT1BH3BT56 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
CHKB-CPT1BH3BT56 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
CHKB-CPT1BH3BT56 RNF170-202ENST00000319073 1265 ntTSL 2 BASIC3.06□□□□□ -1.92
CHKB-CPT1BH3BT56 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
CHKB-CPT1BH3BT56 RNA5SP375-201ENST00000362975 119 ntBASIC3.06□□□□□ -1.92
CHKB-CPT1BH3BT56 RNU6-984P-201ENST00000363236 109 ntBASIC3.06□□□□□ -1.92
CHKB-CPT1BH3BT56 RNA5SP223-201ENST00000365174 120 ntBASIC3.06□□□□□ -1.92
CHKB-CPT1BH3BT56 BPIFA1-202ENST00000375413 1026 ntAPPRIS P2 TSL 1 (best) BASIC3.06□□□□□ -1.92
CHKB-CPT1BH3BT56 IGFL2-201ENST00000377693 607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
CHKB-CPT1BH3BT56 MAPK6PS2-201ENST00000379571 2060 ntBASIC3.06□□□□□ -1.92
CHKB-CPT1BH3BT56 AC019155.1-201ENST00000382242 574 ntBASIC3.06□□□□□ -1.92
CHKB-CPT1BH3BT56 TRAV35-201ENST00000390462 330 ntBASIC3.06□□□□□ -1.92
CHKB-CPT1BH3BT56 IGHV1-24-201ENST00000390610 411 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
CHKB-CPT1BH3BT56 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CHKB-CPT1BH3BT56 ARSFP1-201ENST00000398758 477 ntBASIC3.06□□□□□ -1.92
CHKB-CPT1BH3BT56 FANCL-204ENST00000403676 849 ntTSL 3 BASIC3.06□□□□□ -1.92
CHKB-CPT1BH3BT56 VN1R13P-201ENST00000406212 885 ntBASIC3.06□□□□□ -1.92
CHKB-CPT1BH3BT56 RPL23AP48-201ENST00000406913 488 ntBASIC3.06□□□□□ -1.92
CHKB-CPT1BH3BT56 SETP22-201ENST00000412243 957 ntBASIC3.06□□□□□ -1.92
CHKB-CPT1BH3BT56 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CHKB-CPT1BH3BT56 AL513523.1-201ENST00000417868 1309 ntBASIC3.06□□□□□ -1.92
CHKB-CPT1BH3BT56 RPS7P8-201ENST00000418311 581 ntBASIC3.06□□□□□ -1.92
CHKB-CPT1BH3BT56 KPNA2P2-201ENST00000419546 1489 ntBASIC3.06□□□□□ -1.92
CHKB-CPT1BH3BT56 OR2X1P-201ENST00000421144 687 ntBASIC3.06□□□□□ -1.92
CHKB-CPT1BH3BT56 CDC42P6-201ENST00000421246 576 ntBASIC3.06□□□□□ -1.92
CHKB-CPT1BH3BT56 FAM183DP-201ENST00000421987 399 ntBASIC3.06□□□□□ -1.92
CHKB-CPT1BH3BT56 FTLP17-201ENST00000432567 525 ntBASIC3.06□□□□□ -1.92
CHKB-CPT1BH3BT56 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC3.06□□□□□ -1.92
CHKB-CPT1BH3BT56 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC3.06□□□□□ -1.92
CHKB-CPT1BH3BT56 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CHKB-CPT1BH3BT56 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC3.06□□□□□ -1.92
CHKB-CPT1BH3BT56 MORF4-201ENST00000447135 971 ntBASIC3.06□□□□□ -1.92
CHKB-CPT1BH3BT56 ATP5A1P1-201ENST00000454088 1321 ntBASIC3.06□□□□□ -1.92
CHKB-CPT1BH3BT56 AC007879.2-201ENST00000454444 551 ntTSL 4 BASIC3.06□□□□□ -1.92
CHKB-CPT1BH3BT56 AL121929.1-201ENST00000457120 524 ntTSL 3 BASIC3.06□□□□□ -1.92
CHKB-CPT1BH3BT56 AL391863.1-202ENST00000457427 612 ntTSL 5 BASIC3.06□□□□□ -1.92
CHKB-CPT1BH3BT56 AL603882.1-201ENST00000463059 681 ntBASIC3.06□□□□□ -1.92
CHKB-CPT1BH3BT56 HSD17B7P2-201ENST00000471365 1033 ntBASIC3.06□□□□□ -1.92
CHKB-CPT1BH3BT56 OR7E22P-201ENST00000478335 1035 ntBASIC3.06□□□□□ -1.92
CHKB-CPT1BH3BT56 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC3.06□□□□□ -1.92
CHKB-CPT1BH3BT56 RN7SL143P-201ENST00000496780 297 ntBASIC3.06□□□□□ -1.92
CHKB-CPT1BH3BT56 PPM1AP1-201ENST00000502740 1135 ntBASIC3.06□□□□□ -1.92
CHKB-CPT1BH3BT56 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC3.06□□□□□ -1.92
CHKB-CPT1BH3BT56 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC3.06□□□□□ -1.92
CHKB-CPT1BH3BT56 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC3.06□□□□□ -1.92
CHKB-CPT1BH3BT56 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CHKB-CPT1BH3BT56 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
CHKB-CPT1BH3BT56 OR52H2P-201ENST00000514607 902 ntBASIC3.06□□□□□ -1.92
CHKB-CPT1BH3BT56 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
CHKB-CPT1BH3BT56 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
CHKB-CPT1BH3BT56 NATP-201ENST00000523491 878 ntBASIC3.06□□□□□ -1.92
CHKB-CPT1BH3BT56 AP001803.1-201ENST00000525668 147 ntBASIC3.06□□□□□ -1.92
CHKB-CPT1BH3BT56 CRYAB-203ENST00000525823 915 ntTSL 2 BASIC3.06□□□□□ -1.92
CHKB-CPT1BH3BT56 OR2AL1P-201ENST00000529862 507 ntBASIC3.06□□□□□ -1.92
CHKB-CPT1BH3BT56 EIF4A2P5-201ENST00000529914 499 ntBASIC3.06□□□□□ -1.92
CHKB-CPT1BH3BT56 SLC14A1-206ENST00000535474 1048 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CHKB-CPT1BH3BT56 AC137767.1-202ENST00000543072 752 ntTSL 2 BASIC3.06□□□□□ -1.92
CHKB-CPT1BH3BT56 AC078860.1-201ENST00000546601 527 ntTSL 2 BASIC3.06□□□□□ -1.92
CHKB-CPT1BH3BT56 GNG2-203ENST00000553432 577 ntTSL 4 BASIC3.06□□□□□ -1.92
CHKB-CPT1BH3BT56 PTCSC3-201ENST00000556013 571 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CHKB-CPT1BH3BT56 SEC11A-203ENST00000558134 971 ntTSL 3 BASIC3.06□□□□□ -1.92
CHKB-CPT1BH3BT56 AC023968.1-201ENST00000560719 475 ntBASIC3.06□□□□□ -1.92
CHKB-CPT1BH3BT56 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC3.06□□□□□ -1.92
CHKB-CPT1BH3BT56 AC034105.2-201ENST00000561866 238 ntBASIC3.06□□□□□ -1.92
CHKB-CPT1BH3BT56 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC3.06□□□□□ -1.92
CHKB-CPT1BH3BT56 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC3.06□□□□□ -1.92
CHKB-CPT1BH3BT56 AC009021.1-201ENST00000566098 375 ntTSL 5 BASIC3.06□□□□□ -1.92
CHKB-CPT1BH3BT56 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC3.06□□□□□ -1.92
CHKB-CPT1BH3BT56 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CHKB-CPT1BH3BT56 AC005537.1-202ENST00000585996 666 ntTSL 5 BASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms