Protein–RNA interactions for Protein: B2RPK0

HMGB1P1, Putative high mobility group protein B1-like 1, humanhuman

Predicted RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1B2RPK0 AL603750.1-201ENST00000624216 1717 ntBASIC6.3□□□□□ -1.4
HMGB1P1B2RPK0 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
HMGB1P1B2RPK0 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
HMGB1P1B2RPK0 MED31-201ENST00000225728 1654 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
HMGB1P1B2RPK0 CCT8P1-201ENST00000413611 1657 ntBASIC6.3□□□□□ -1.4
HMGB1P1B2RPK0 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
HMGB1P1B2RPK0 AC005224.3-201ENST00000584683 2140 ntBASIC6.29□□□□□ -1.4
HMGB1P1B2RPK0 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
HMGB1P1B2RPK0 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
HMGB1P1B2RPK0 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
HMGB1P1B2RPK0 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
HMGB1P1B2RPK0 ALOX5AP-201ENST00000380490 904 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
HMGB1P1B2RPK0 RN7SKP268-201ENST00000411107 316 ntBASIC6.29□□□□□ -1.4
HMGB1P1B2RPK0 AC093107.1-201ENST00000422772 609 ntBASIC6.29□□□□□ -1.4
HMGB1P1B2RPK0 AL121917.1-202ENST00000424434 367 ntTSL 3 BASIC6.29□□□□□ -1.4
HMGB1P1B2RPK0 AL157884.1-201ENST00000424561 454 ntBASIC6.29□□□□□ -1.4
HMGB1P1B2RPK0 ETF1P1-206ENST00000427296 984 ntBASIC6.29□□□□□ -1.4
HMGB1P1B2RPK0 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC6.29□□□□□ -1.4
HMGB1P1B2RPK0 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC6.29□□□□□ -1.4
HMGB1P1B2RPK0 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
HMGB1P1B2RPK0 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC6.29□□□□□ -1.4
HMGB1P1B2RPK0 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC6.29□□□□□ -1.4
HMGB1P1B2RPK0 AC005517.1-201ENST00000452091 489 ntBASIC6.29□□□□□ -1.4
HMGB1P1B2RPK0 RPS27AP16-201ENST00000492222 470 ntBASIC6.29□□□□□ -1.4
HMGB1P1B2RPK0 AC093225.1-201ENST00000506867 1408 ntBASIC6.29□□□□□ -1.4
HMGB1P1B2RPK0 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC6.29□□□□□ -1.4
HMGB1P1B2RPK0 AC090958.1-201ENST00000511122 351 ntBASIC6.29□□□□□ -1.4
HMGB1P1B2RPK0 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC6.29□□□□□ -1.4
HMGB1P1B2RPK0 AC023866.2-201ENST00000521378 387 ntTSL 3 BASIC6.29□□□□□ -1.4
HMGB1P1B2RPK0 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC6.29□□□□□ -1.4
HMGB1P1B2RPK0 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC6.29□□□□□ -1.4
HMGB1P1B2RPK0 HIGD1AP9-201ENST00000550710 279 ntBASIC6.29□□□□□ -1.4
HMGB1P1B2RPK0 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC6.29□□□□□ -1.4
HMGB1P1B2RPK0 AC022405.1-201ENST00000559841 516 ntTSL 3 BASIC6.29□□□□□ -1.4
HMGB1P1B2RPK0 AC092720.1-203ENST00000563921 550 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
HMGB1P1B2RPK0 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC6.29□□□□□ -1.4
HMGB1P1B2RPK0 MIR4428-201ENST00000584884 73 ntBASIC6.29□□□□□ -1.4
HMGB1P1B2RPK0 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC6.29□□□□□ -1.4
HMGB1P1B2RPK0 AC005154.6-201ENST00000598361 687 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
HMGB1P1B2RPK0 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC6.29□□□□□ -1.4
HMGB1P1B2RPK0 RPL17P3-201ENST00000605695 525 ntBASIC6.29□□□□□ -1.4
HMGB1P1B2RPK0 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC6.29□□□□□ -1.4
HMGB1P1B2RPK0 AC243830.3-201ENST00000616810 376 ntBASIC6.29□□□□□ -1.4
HMGB1P1B2RPK0 MIR7159-201ENST00000620587 66 ntBASIC6.29□□□□□ -1.4
HMGB1P1B2RPK0 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC6.29□□□□□ -1.4
HMGB1P1B2RPK0 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
HMGB1P1B2RPK0 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
HMGB1P1B2RPK0 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.29□□□□□ -1.4
HMGB1P1B2RPK0 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
HMGB1P1B2RPK0 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
HMGB1P1B2RPK0 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
HMGB1P1B2RPK0 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
HMGB1P1B2RPK0 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC6.28□□□□□ -1.4
HMGB1P1B2RPK0 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
HMGB1P1B2RPK0 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
HMGB1P1B2RPK0 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
HMGB1P1B2RPK0 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
HMGB1P1B2RPK0 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
HMGB1P1B2RPK0 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
HMGB1P1B2RPK0 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
HMGB1P1B2RPK0 SNORD16-201ENST00000362803 99 ntBASIC6.28□□□□□ -1.4
HMGB1P1B2RPK0 RNA5SP302-201ENST00000364896 100 ntBASIC6.28□□□□□ -1.4
HMGB1P1B2RPK0 TCTE3-201ENST00000366774 769 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
HMGB1P1B2RPK0 SNORA77.2-201ENST00000408571 112 ntBASIC6.28□□□□□ -1.4
HMGB1P1B2RPK0 LINC01505-201ENST00000411451 686 ntTSL 3 BASIC6.28□□□□□ -1.4
HMGB1P1B2RPK0 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
HMGB1P1B2RPK0 METTL15P3-201ENST00000415522 1221 ntBASIC6.28□□□□□ -1.4
HMGB1P1B2RPK0 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC6.28□□□□□ -1.4
HMGB1P1B2RPK0 AL158073.1-201ENST00000426848 1104 ntBASIC6.28□□□□□ -1.4
HMGB1P1B2RPK0 VDAC2P3-201ENST00000430995 828 ntBASIC6.28□□□□□ -1.4
HMGB1P1B2RPK0 MED28P4-201ENST00000433137 572 ntBASIC6.28□□□□□ -1.4
HMGB1P1B2RPK0 AC099670.2-201ENST00000435130 321 ntBASIC6.28□□□□□ -1.4
HMGB1P1B2RPK0 TRAPPC13P1-201ENST00000435991 1062 ntBASIC6.28□□□□□ -1.4
HMGB1P1B2RPK0 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC6.28□□□□□ -1.4
HMGB1P1B2RPK0 NPM1P23-201ENST00000440193 849 ntBASIC6.28□□□□□ -1.4
HMGB1P1B2RPK0 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC6.28□□□□□ -1.4
HMGB1P1B2RPK0 UBBP5-201ENST00000446970 266 ntBASIC6.28□□□□□ -1.4
HMGB1P1B2RPK0 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC6.28□□□□□ -1.4
HMGB1P1B2RPK0 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
HMGB1P1B2RPK0 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC6.28□□□□□ -1.4
HMGB1P1B2RPK0 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
HMGB1P1B2RPK0 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
HMGB1P1B2RPK0 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
HMGB1P1B2RPK0 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC6.28□□□□□ -1.4
HMGB1P1B2RPK0 AC010442.1-201ENST00000515583 816 ntBASIC6.28□□□□□ -1.4
HMGB1P1B2RPK0 CASC11-203ENST00000519071 791 ntTSL 3 BASIC6.28□□□□□ -1.4
HMGB1P1B2RPK0 OR9G2P-201ENST00000533326 880 ntBASIC6.28□□□□□ -1.4
HMGB1P1B2RPK0 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC6.28□□□□□ -1.4
HMGB1P1B2RPK0 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC6.28□□□□□ -1.4
HMGB1P1B2RPK0 SETP1-201ENST00000556014 845 ntBASIC6.28□□□□□ -1.4
HMGB1P1B2RPK0 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC6.28□□□□□ -1.4
HMGB1P1B2RPK0 HNRNPA3P9-201ENST00000604913 979 ntBASIC6.28□□□□□ -1.4
HMGB1P1B2RPK0 AL008729.2-201ENST00000606393 473 ntBASIC6.28□□□□□ -1.4
HMGB1P1B2RPK0 AC055764.2-201ENST00000610089 670 ntBASIC6.28□□□□□ -1.4
HMGB1P1B2RPK0 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC6.28□□□□□ -1.4
HMGB1P1B2RPK0 AC009032.1-201ENST00000617574 431 ntBASIC6.28□□□□□ -1.4
HMGB1P1B2RPK0 MIR6085-201ENST00000618314 110 ntBASIC6.28□□□□□ -1.4
HMGB1P1B2RPK0 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC6.28□□□□□ -1.4
HMGB1P1B2RPK0 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
HMGB1P1B2RPK0 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms