Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 AC073610.1-201ENST00000489971 396 ntBASIC5.76□□□□□ -1.49
TREX1Q9NSU2 OR7E157P-201ENST00000494376 911 ntBASIC5.76□□□□□ -1.49
TREX1Q9NSU2 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC5.76□□□□□ -1.49
TREX1Q9NSU2 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.76□□□□□ -1.49
TREX1Q9NSU2 AC074255.1-201ENST00000511259 501 ntBASIC5.76□□□□□ -1.49
TREX1Q9NSU2 RNA5SP473-201ENST00000516402 125 ntBASIC5.76□□□□□ -1.49
TREX1Q9NSU2 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.76□□□□□ -1.49
TREX1Q9NSU2 AC027369.2-201ENST00000528030 440 ntBASIC5.76□□□□□ -1.49
TREX1Q9NSU2 AP000648.1-201ENST00000529682 397 ntBASIC5.76□□□□□ -1.49
TREX1Q9NSU2 AC139697.1-201ENST00000548429 745 ntBASIC5.76□□□□□ -1.49
TREX1Q9NSU2 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC5.76□□□□□ -1.49
TREX1Q9NSU2 AC125494.2-201ENST00000602431 657 ntBASIC5.76□□□□□ -1.49
TREX1Q9NSU2 AL031601.1-201ENST00000605702 394 ntBASIC5.76□□□□□ -1.49
TREX1Q9NSU2 MIR6780B-201ENST00000610307 79 ntBASIC5.76□□□□□ -1.49
TREX1Q9NSU2 AC073592.6-201ENST00000624271 415 ntBASIC5.76□□□□□ -1.49
TREX1Q9NSU2 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC5.76□□□□□ -1.49
TREX1Q9NSU2 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
TREX1Q9NSU2 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.76□□□□□ -1.49
TREX1Q9NSU2 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
TREX1Q9NSU2 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.76□□□□□ -1.49
TREX1Q9NSU2 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.76□□□□□ -1.49
TREX1Q9NSU2 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.76□□□□□ -1.49
TREX1Q9NSU2 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.76□□□□□ -1.49
TREX1Q9NSU2 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
TREX1Q9NSU2 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.76□□□□□ -1.49
TREX1Q9NSU2 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.76□□□□□ -1.49
TREX1Q9NSU2 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
TREX1Q9NSU2 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
TREX1Q9NSU2 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
TREX1Q9NSU2 TTC41P-205ENST00000551270 3963 ntBASIC5.75□□□□□ -1.49
TREX1Q9NSU2 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
TREX1Q9NSU2 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
TREX1Q9NSU2 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
TREX1Q9NSU2 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
TREX1Q9NSU2 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
TREX1Q9NSU2 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
TREX1Q9NSU2 TMSB4XP2-201ENST00000335179 210 ntBASIC5.75□□□□□ -1.49
TREX1Q9NSU2 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
TREX1Q9NSU2 NIFKP3-201ENST00000417799 865 ntBASIC5.75□□□□□ -1.49
TREX1Q9NSU2 HSPE1P27-201ENST00000430808 296 ntBASIC5.75□□□□□ -1.49
TREX1Q9NSU2 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.75□□□□□ -1.49
TREX1Q9NSU2 AC073072.2-201ENST00000447425 348 ntBASIC5.75□□□□□ -1.49
TREX1Q9NSU2 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC5.75□□□□□ -1.49
TREX1Q9NSU2 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC5.75□□□□□ -1.49
TREX1Q9NSU2 AP002884.1-201ENST00000479691 655 ntBASIC5.75□□□□□ -1.49
TREX1Q9NSU2 DUTP1-201ENST00000493631 470 ntBASIC5.75□□□□□ -1.49
TREX1Q9NSU2 AK6-203ENST00000502819 743 ntTSL 5 BASIC5.75□□□□□ -1.49
TREX1Q9NSU2 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC5.75□□□□□ -1.49
TREX1Q9NSU2 OR5H7P-201ENST00000514084 930 ntBASIC5.75□□□□□ -1.49
TREX1Q9NSU2 GAPDHP62-201ENST00000515313 990 ntBASIC5.75□□□□□ -1.49
TREX1Q9NSU2 AC011853.1-201ENST00000518911 454 ntBASIC5.75□□□□□ -1.49
TREX1Q9NSU2 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5.75□□□□□ -1.49
TREX1Q9NSU2 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.75□□□□□ -1.49
TREX1Q9NSU2 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.75□□□□□ -1.49
TREX1Q9NSU2 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
TREX1Q9NSU2 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC5.75□□□□□ -1.49
TREX1Q9NSU2 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.75□□□□□ -1.49
TREX1Q9NSU2 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
TREX1Q9NSU2 AP000432.2-201ENST00000624164 2048 ntBASIC5.75□□□□□ -1.49
TREX1Q9NSU2 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
TREX1Q9NSU2 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.75□□□□□ -1.49
TREX1Q9NSU2 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
TREX1Q9NSU2 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.75□□□□□ -1.49
TREX1Q9NSU2 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
TREX1Q9NSU2 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
TREX1Q9NSU2 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
TREX1Q9NSU2 SSXP3-201ENST00000442971 1300 ntBASIC5.74□□□□□ -1.49
TREX1Q9NSU2 ALB-220ENST00000621628 1606 ntTSL 5 BASIC5.74□□□□□ -1.49
TREX1Q9NSU2 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
TREX1Q9NSU2 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
TREX1Q9NSU2 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
TREX1Q9NSU2 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC5.74□□□□□ -1.49
TREX1Q9NSU2 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.74□□□□□ -1.49
TREX1Q9NSU2 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
TREX1Q9NSU2 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
TREX1Q9NSU2 MIR1203-201ENST00000408812 85 ntBASIC5.74□□□□□ -1.49
TREX1Q9NSU2 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.74□□□□□ -1.49
TREX1Q9NSU2 AC069154.1-201ENST00000432914 542 ntBASIC5.74□□□□□ -1.49
TREX1Q9NSU2 PCBP2P1-201ENST00000437262 977 ntBASIC5.74□□□□□ -1.49
TREX1Q9NSU2 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC5.74□□□□□ -1.49
TREX1Q9NSU2 AL359839.1-201ENST00000451975 1160 ntBASIC5.74□□□□□ -1.49
TREX1Q9NSU2 MEMO1P4-201ENST00000453590 386 ntBASIC5.74□□□□□ -1.49
TREX1Q9NSU2 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC5.74□□□□□ -1.49
TREX1Q9NSU2 RN7SL570P-201ENST00000484405 292 ntBASIC5.74□□□□□ -1.49
TREX1Q9NSU2 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.74□□□□□ -1.49
TREX1Q9NSU2 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.74□□□□□ -1.49
TREX1Q9NSU2 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.74□□□□□ -1.49
TREX1Q9NSU2 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
TREX1Q9NSU2 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.74□□□□□ -1.49
TREX1Q9NSU2 AC137627.1-201ENST00000545761 289 ntBASIC5.74□□□□□ -1.49
TREX1Q9NSU2 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.74□□□□□ -1.49
TREX1Q9NSU2 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
TREX1Q9NSU2 DHFRP1-201ENST00000579682 559 ntBASIC5.74□□□□□ -1.49
TREX1Q9NSU2 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.74□□□□□ -1.49
TREX1Q9NSU2 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
TREX1Q9NSU2 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
TREX1Q9NSU2 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.74□□□□□ -1.49
TREX1Q9NSU2 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
TREX1Q9NSU2 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
TREX1Q9NSU2 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms