Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC6.13□□□□□ -1.43
SIX2Q9NPC8 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SIX2Q9NPC8 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SIX2Q9NPC8 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
SIX2Q9NPC8 AC010401.2-201ENST00000575137 4934 ntBASIC6.13□□□□□ -1.43
SIX2Q9NPC8 AC068870.1-201ENST00000563737 2455 ntBASIC6.13□□□□□ -1.43
SIX2Q9NPC8 LIPA-203ENST00000371837 2513 ntTSL 2 BASIC6.13□□□□□ -1.43
SIX2Q9NPC8 RNA5SP30-201ENST00000365552 115 ntBASIC6.13□□□□□ -1.43
SIX2Q9NPC8 SUGT1P2-201ENST00000379452 992 ntBASIC6.13□□□□□ -1.43
SIX2Q9NPC8 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC6.13□□□□□ -1.43
SIX2Q9NPC8 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC6.13□□□□□ -1.43
SIX2Q9NPC8 OR10T1P-201ENST00000424327 947 ntBASIC6.13□□□□□ -1.43
SIX2Q9NPC8 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC6.13□□□□□ -1.43
SIX2Q9NPC8 AL512637.1-201ENST00000439523 1231 ntBASIC6.13□□□□□ -1.43
SIX2Q9NPC8 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC6.13□□□□□ -1.43
SIX2Q9NPC8 MEMO1P4-201ENST00000453590 386 ntBASIC6.13□□□□□ -1.43
SIX2Q9NPC8 RN7SL170P-201ENST00000487098 295 ntBASIC6.13□□□□□ -1.43
SIX2Q9NPC8 AK6-203ENST00000502819 743 ntTSL 5 BASIC6.13□□□□□ -1.43
SIX2Q9NPC8 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC6.13□□□□□ -1.43
SIX2Q9NPC8 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC6.13□□□□□ -1.43
SIX2Q9NPC8 RN7SKP253-201ENST00000516424 309 ntBASIC6.13□□□□□ -1.43
SIX2Q9NPC8 SCARNA6.1-201ENST00000516989 238 ntBASIC6.13□□□□□ -1.43
SIX2Q9NPC8 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC6.13□□□□□ -1.43
SIX2Q9NPC8 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC6.13□□□□□ -1.43
SIX2Q9NPC8 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC6.13□□□□□ -1.43
SIX2Q9NPC8 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC6.13□□□□□ -1.43
SIX2Q9NPC8 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC6.13□□□□□ -1.43
SIX2Q9NPC8 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC6.13□□□□□ -1.43
SIX2Q9NPC8 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC6.13□□□□□ -1.43
SIX2Q9NPC8 AC104574.1-201ENST00000561182 925 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SIX2Q9NPC8 CASC22-201ENST00000569713 386 ntTSL 5 BASIC6.13□□□□□ -1.43
SIX2Q9NPC8 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC6.13□□□□□ -1.43
SIX2Q9NPC8 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC6.13□□□□□ -1.43
SIX2Q9NPC8 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC6.13□□□□□ -1.43
SIX2Q9NPC8 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SIX2Q9NPC8 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SIX2Q9NPC8 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC6.13□□□□□ -1.43
SIX2Q9NPC8 AC063977.5-201ENST00000601044 974 ntBASIC6.13□□□□□ -1.43
SIX2Q9NPC8 Six3os1_2.1-201ENST00000616963 217 ntBASIC6.13□□□□□ -1.43
SIX2Q9NPC8 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC6.13□□□□□ -1.43
SIX2Q9NPC8 FO681491.1-202ENST00000623392 737 ntBASIC6.13□□□□□ -1.43
SIX2Q9NPC8 AC073593.1-201ENST00000624500 411 ntBASIC6.13□□□□□ -1.43
SIX2Q9NPC8 AC005618.4-201ENST00000625053 554 ntBASIC6.13□□□□□ -1.43
SIX2Q9NPC8 SLC9B1P1-201ENST00000331172 1337 ntBASIC6.13□□□□□ -1.43
SIX2Q9NPC8 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
SIX2Q9NPC8 SSXP3-201ENST00000442971 1300 ntBASIC6.13□□□□□ -1.43
SIX2Q9NPC8 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC6.13□□□□□ -1.43
SIX2Q9NPC8 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC6.13□□□□□ -1.43
SIX2Q9NPC8 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC6.13□□□□□ -1.43
SIX2Q9NPC8 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.13□□□□□ -1.43
SIX2Q9NPC8 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SIX2Q9NPC8 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SIX2Q9NPC8 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
SIX2Q9NPC8 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC6.13□□□□□ -1.43
SIX2Q9NPC8 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SIX2Q9NPC8 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
SIX2Q9NPC8 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
SIX2Q9NPC8 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SIX2Q9NPC8 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
SIX2Q9NPC8 AL121886.1-201ENST00000358609 435 ntBASIC6.12□□□□□ -1.43
SIX2Q9NPC8 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SIX2Q9NPC8 SNORA64.1-201ENST00000362600 132 ntBASIC6.12□□□□□ -1.43
SIX2Q9NPC8 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC6.12□□□□□ -1.43
SIX2Q9NPC8 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
SIX2Q9NPC8 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC6.12□□□□□ -1.43
SIX2Q9NPC8 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC6.12□□□□□ -1.43
SIX2Q9NPC8 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SIX2Q9NPC8 AL049634.1-201ENST00000453770 1720 ntBASIC6.12□□□□□ -1.43
SIX2Q9NPC8 SNORD125-201ENST00000459538 96 ntBASIC6.12□□□□□ -1.43
SIX2Q9NPC8 RPS23P6-201ENST00000466136 431 ntBASIC6.12□□□□□ -1.43
SIX2Q9NPC8 AC111000.5-201ENST00000506559 1178 ntBASIC6.12□□□□□ -1.43
SIX2Q9NPC8 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SIX2Q9NPC8 AC060775.1-201ENST00000518241 520 ntBASIC6.12□□□□□ -1.43
SIX2Q9NPC8 MAL2-207ENST00000522828 603 ntTSL 3 BASIC6.12□□□□□ -1.43
SIX2Q9NPC8 TRIM77BP-201ENST00000524985 1119 ntBASIC6.12□□□□□ -1.43
SIX2Q9NPC8 AC024405.1-201ENST00000532521 1042 ntBASIC6.12□□□□□ -1.43
SIX2Q9NPC8 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC6.12□□□□□ -1.43
SIX2Q9NPC8 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC6.12□□□□□ -1.43
SIX2Q9NPC8 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC6.12□□□□□ -1.43
SIX2Q9NPC8 AC084824.2-201ENST00000548906 345 ntBASIC6.12□□□□□ -1.43
SIX2Q9NPC8 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC6.12□□□□□ -1.43
SIX2Q9NPC8 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC6.12□□□□□ -1.43
SIX2Q9NPC8 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SIX2Q9NPC8 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC6.12□□□□□ -1.43
SIX2Q9NPC8 OR7A1P-201ENST00000601206 970 ntBASIC6.12□□□□□ -1.43
SIX2Q9NPC8 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC6.12□□□□□ -1.43
SIX2Q9NPC8 AC018809.2-201ENST00000602436 3823 ntBASIC6.12□□□□□ -1.43
SIX2Q9NPC8 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC6.12□□□□□ -1.43
SIX2Q9NPC8 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC6.12□□□□□ -1.43
SIX2Q9NPC8 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC6.12□□□□□ -1.43
SIX2Q9NPC8 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SIX2Q9NPC8 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SIX2Q9NPC8 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SIX2Q9NPC8 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC6.11□□□□□ -1.43
SIX2Q9NPC8 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
SIX2Q9NPC8 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC6.11□□□□□ -1.43
SIX2Q9NPC8 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
SIX2Q9NPC8 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
SIX2Q9NPC8 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SIX2Q9NPC8 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms