Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 RPL19P11-201ENST00000495944 589 ntBASIC6.07□□□□□ -1.44
TRIM4Q9C037 AC105384.1-201ENST00000512405 835 ntTSL 3 BASIC6.07□□□□□ -1.44
TRIM4Q9C037 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC6.07□□□□□ -1.44
TRIM4Q9C037 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
TRIM4Q9C037 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC6.07□□□□□ -1.44
TRIM4Q9C037 NPM1P42-201ENST00000560329 862 ntBASIC6.07□□□□□ -1.44
TRIM4Q9C037 MIR4489-201ENST00000578869 62 ntBASIC6.07□□□□□ -1.44
TRIM4Q9C037 RN7SL475P-201ENST00000583379 298 ntBASIC6.07□□□□□ -1.44
TRIM4Q9C037 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC6.07□□□□□ -1.44
TRIM4Q9C037 MIR6730-201ENST00000622213 67 ntBASIC6.07□□□□□ -1.44
TRIM4Q9C037 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC6.07□□□□□ -1.44
TRIM4Q9C037 AL049767.1-202ENST00000637826 242 ntBASIC6.07□□□□□ -1.44
TRIM4Q9C037 MTCO1P7-201ENST00000419523 1542 ntBASIC6.07□□□□□ -1.44
TRIM4Q9C037 AL078595.2-201ENST00000605309 1780 ntBASIC6.07□□□□□ -1.44
TRIM4Q9C037 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC6.07□□□□□ -1.44
TRIM4Q9C037 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
TRIM4Q9C037 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
TRIM4Q9C037 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC6.07□□□□□ -1.44
TRIM4Q9C037 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC6.07□□□□□ -1.44
TRIM4Q9C037 AC073429.2-201ENST00000569694 1444 ntBASIC6.07□□□□□ -1.44
TRIM4Q9C037 SAGE3P-201ENST00000619800 1635 ntBASIC6.07□□□□□ -1.44
TRIM4Q9C037 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
TRIM4Q9C037 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
TRIM4Q9C037 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
TRIM4Q9C037 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC6.06□□□□□ -1.44
TRIM4Q9C037 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
TRIM4Q9C037 EIF3EP1-201ENST00000433978 1316 ntBASIC6.06□□□□□ -1.44
TRIM4Q9C037 MTHFD2P5-201ENST00000320415 844 ntBASIC6.06□□□□□ -1.44
TRIM4Q9C037 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
TRIM4Q9C037 OR7E25P-201ENST00000344844 931 ntBASIC6.06□□□□□ -1.44
TRIM4Q9C037 RNA5SP284-201ENST00000384547 118 ntBASIC6.06□□□□□ -1.44
TRIM4Q9C037 RN7SKP286-201ENST00000410894 299 ntBASIC6.06□□□□□ -1.44
TRIM4Q9C037 AC083862.1-201ENST00000427378 1242 ntBASIC6.06□□□□□ -1.44
TRIM4Q9C037 MTND6P12-201ENST00000428247 522 ntBASIC6.06□□□□□ -1.44
TRIM4Q9C037 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
TRIM4Q9C037 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC6.06□□□□□ -1.44
TRIM4Q9C037 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC6.06□□□□□ -1.44
TRIM4Q9C037 RN7SL72P-201ENST00000460697 269 ntBASIC6.06□□□□□ -1.44
TRIM4Q9C037 RN7SL515P-201ENST00000463999 297 ntBASIC6.06□□□□□ -1.44
TRIM4Q9C037 AC007998.1-201ENST00000474156 672 ntBASIC6.06□□□□□ -1.44
TRIM4Q9C037 GM2AP2-201ENST00000491764 562 ntBASIC6.06□□□□□ -1.44
TRIM4Q9C037 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC6.06□□□□□ -1.44
TRIM4Q9C037 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC6.06□□□□□ -1.44
TRIM4Q9C037 LDHAP1-201ENST00000509421 992 ntBASIC6.06□□□□□ -1.44
TRIM4Q9C037 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC6.06□□□□□ -1.44
TRIM4Q9C037 OR4A40P-201ENST00000533878 948 ntBASIC6.06□□□□□ -1.44
TRIM4Q9C037 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC6.06□□□□□ -1.44
TRIM4Q9C037 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC6.06□□□□□ -1.44
TRIM4Q9C037 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
TRIM4Q9C037 OR4H6P-201ENST00000563771 921 ntBASIC6.06□□□□□ -1.44
TRIM4Q9C037 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC6.06□□□□□ -1.44
TRIM4Q9C037 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC6.06□□□□□ -1.44
TRIM4Q9C037 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC6.06□□□□□ -1.44
TRIM4Q9C037 RN7SL208P-201ENST00000577964 296 ntBASIC6.06□□□□□ -1.44
TRIM4Q9C037 MIR4700-201ENST00000578311 74 ntBASIC6.06□□□□□ -1.44
TRIM4Q9C037 OOSP1P2-201ENST00000579644 351 ntBASIC6.06□□□□□ -1.44
TRIM4Q9C037 AC233702.7-202ENST00000582941 211 ntBASIC6.06□□□□□ -1.44
TRIM4Q9C037 AC008507.3-201ENST00000585753 472 ntBASIC6.06□□□□□ -1.44
TRIM4Q9C037 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC6.06□□□□□ -1.44
TRIM4Q9C037 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC6.06□□□□□ -1.44
TRIM4Q9C037 AC126175.1-201ENST00000617041 758 ntBASIC6.06□□□□□ -1.44
TRIM4Q9C037 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
TRIM4Q9C037 AC129915.3-201ENST00000634128 948 ntBASIC6.06□□□□□ -1.44
TRIM4Q9C037 SMG1P5-202ENST00000529428 4219 ntBASIC6.06□□□□□ -1.44
TRIM4Q9C037 SMG1P2-201ENST00000566127 4221 ntBASIC6.06□□□□□ -1.44
TRIM4Q9C037 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.06□□□□□ -1.44
TRIM4Q9C037 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
TRIM4Q9C037 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC6.06□□□□□ -1.44
TRIM4Q9C037 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
TRIM4Q9C037 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
TRIM4Q9C037 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
TRIM4Q9C037 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC6.06□□□□□ -1.44
TRIM4Q9C037 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
TRIM4Q9C037 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.06□□□□□ -1.44
TRIM4Q9C037 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
TRIM4Q9C037 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
TRIM4Q9C037 BIN2P1-201ENST00000504996 1530 ntBASIC6.05□□□□□ -1.44
TRIM4Q9C037 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
TRIM4Q9C037 AL121977.1-201ENST00000401636 979 ntBASIC6.05□□□□□ -1.44
TRIM4Q9C037 CYP4F30P-202ENST00000420048 405 ntBASIC6.05□□□□□ -1.44
TRIM4Q9C037 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC6.05□□□□□ -1.44
TRIM4Q9C037 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC6.05□□□□□ -1.44
TRIM4Q9C037 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC6.05□□□□□ -1.44
TRIM4Q9C037 AC079922.1-201ENST00000443291 359 ntBASIC6.05□□□□□ -1.44
TRIM4Q9C037 AC010240.2-201ENST00000445363 1205 ntBASIC6.05□□□□□ -1.44
TRIM4Q9C037 AL020997.1-201ENST00000446554 349 ntBASIC6.05□□□□□ -1.44
TRIM4Q9C037 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC6.05□□□□□ -1.44
TRIM4Q9C037 SNX18P26-201ENST00000458433 740 ntBASIC6.05□□□□□ -1.44
TRIM4Q9C037 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC6.05□□□□□ -1.44
TRIM4Q9C037 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC6.05□□□□□ -1.44
TRIM4Q9C037 CYCSP25-201ENST00000525280 316 ntBASIC6.05□□□□□ -1.44
TRIM4Q9C037 AL133399.1-201ENST00000527476 298 ntBASIC6.05□□□□□ -1.44
TRIM4Q9C037 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC6.05□□□□□ -1.44
TRIM4Q9C037 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC6.05□□□□□ -1.44
TRIM4Q9C037 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC6.05□□□□□ -1.44
TRIM4Q9C037 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC6.05□□□□□ -1.44
TRIM4Q9C037 SMARCE1P3-201ENST00000553649 1231 ntBASIC6.05□□□□□ -1.44
TRIM4Q9C037 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC6.05□□□□□ -1.44
TRIM4Q9C037 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC6.05□□□□□ -1.44
TRIM4Q9C037 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms