Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
UPF3BQ9BZI7 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
UPF3BQ9BZI7 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
UPF3BQ9BZI7 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
UPF3BQ9BZI7 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
UPF3BQ9BZI7 AP004607.3-201ENST00000530354 3915 ntBASIC6.98□□□□□ -1.29
UPF3BQ9BZI7 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC6.98□□□□□ -1.29
UPF3BQ9BZI7 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
UPF3BQ9BZI7 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC6.98□□□□□ -1.29
UPF3BQ9BZI7 BMS1P13-201ENST00000417301 885 ntBASIC6.98□□□□□ -1.29
UPF3BQ9BZI7 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC6.98□□□□□ -1.29
UPF3BQ9BZI7 KIF4CP-201ENST00000422742 1279 ntBASIC6.98□□□□□ -1.29
UPF3BQ9BZI7 BMS1P10-201ENST00000443754 1120 ntBASIC6.98□□□□□ -1.29
UPF3BQ9BZI7 AC023245.1-201ENST00000468501 517 ntBASIC6.98□□□□□ -1.29
UPF3BQ9BZI7 AC079080.1-201ENST00000479841 822 ntBASIC6.98□□□□□ -1.29
UPF3BQ9BZI7 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC6.98□□□□□ -1.29
UPF3BQ9BZI7 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC6.98□□□□□ -1.29
UPF3BQ9BZI7 RN7SKP238-201ENST00000516483 249 ntBASIC6.98□□□□□ -1.29
UPF3BQ9BZI7 IGHVIII-67-4-201ENST00000524281 296 ntBASIC6.98□□□□□ -1.29
UPF3BQ9BZI7 AC027369.2-201ENST00000528030 440 ntBASIC6.98□□□□□ -1.29
UPF3BQ9BZI7 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC6.98□□□□□ -1.29
UPF3BQ9BZI7 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC6.98□□□□□ -1.29
UPF3BQ9BZI7 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC6.98□□□□□ -1.29
UPF3BQ9BZI7 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC6.98□□□□□ -1.29
UPF3BQ9BZI7 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
UPF3BQ9BZI7 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC6.98□□□□□ -1.29
UPF3BQ9BZI7 AC006115.2-201ENST00000596823 202 ntBASIC6.98□□□□□ -1.29
UPF3BQ9BZI7 AC093388.1-201ENST00000609166 430 ntBASIC6.98□□□□□ -1.29
UPF3BQ9BZI7 MIR6826-201ENST00000617808 98 ntBASIC6.98□□□□□ -1.29
UPF3BQ9BZI7 AL445670.1-201ENST00000618889 801 ntBASIC6.98□□□□□ -1.29
UPF3BQ9BZI7 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
UPF3BQ9BZI7 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
UPF3BQ9BZI7 AC004076.2-201ENST00000620532 3323 ntBASIC6.98□□□□□ -1.29
UPF3BQ9BZI7 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
UPF3BQ9BZI7 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC6.98□□□□□ -1.29
UPF3BQ9BZI7 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
UPF3BQ9BZI7 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
UPF3BQ9BZI7 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
UPF3BQ9BZI7 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC6.98□□□□□ -1.29
UPF3BQ9BZI7 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
UPF3BQ9BZI7 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
UPF3BQ9BZI7 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
UPF3BQ9BZI7 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
UPF3BQ9BZI7 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
UPF3BQ9BZI7 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC6.97□□□□□ -1.29
UPF3BQ9BZI7 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
UPF3BQ9BZI7 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
UPF3BQ9BZI7 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC6.97□□□□□ -1.29
UPF3BQ9BZI7 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
UPF3BQ9BZI7 RNA5SP514-201ENST00000363717 111 ntBASIC6.97□□□□□ -1.29
UPF3BQ9BZI7 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
UPF3BQ9BZI7 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC6.97□□□□□ -1.29
UPF3BQ9BZI7 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC6.97□□□□□ -1.29
UPF3BQ9BZI7 GAPDHP75-201ENST00000433910 943 ntBASIC6.97□□□□□ -1.29
UPF3BQ9BZI7 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC6.97□□□□□ -1.29
UPF3BQ9BZI7 RPL23AP19-201ENST00000436229 369 ntBASIC6.97□□□□□ -1.29
UPF3BQ9BZI7 GAPDHP48-201ENST00000436626 961 ntBASIC6.97□□□□□ -1.29
UPF3BQ9BZI7 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC6.97□□□□□ -1.29
UPF3BQ9BZI7 AC073109.1-201ENST00000445066 978 ntBASIC6.97□□□□□ -1.29
UPF3BQ9BZI7 AC110749.1-201ENST00000462007 357 ntBASIC6.97□□□□□ -1.29
UPF3BQ9BZI7 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC6.97□□□□□ -1.29
UPF3BQ9BZI7 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
UPF3BQ9BZI7 LDHC-205ENST00000537486 583 ntTSL 5 BASIC6.97□□□□□ -1.29
UPF3BQ9BZI7 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC6.97□□□□□ -1.29
UPF3BQ9BZI7 AC092332.1-201ENST00000563684 829 ntBASIC6.97□□□□□ -1.29
UPF3BQ9BZI7 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC6.97□□□□□ -1.29
UPF3BQ9BZI7 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC6.97□□□□□ -1.29
UPF3BQ9BZI7 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
UPF3BQ9BZI7 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
UPF3BQ9BZI7 MIR6809-201ENST00000612189 116 ntBASIC6.97□□□□□ -1.29
UPF3BQ9BZI7 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
UPF3BQ9BZI7 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
UPF3BQ9BZI7 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
UPF3BQ9BZI7 AP002512.4-202ENST00000641599 4530 ntBASIC6.97□□□□□ -1.29
UPF3BQ9BZI7 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
UPF3BQ9BZI7 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
UPF3BQ9BZI7 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC6.97□□□□□ -1.29
UPF3BQ9BZI7 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC6.96□□□□□ -1.29
UPF3BQ9BZI7 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6.96□□□□□ -1.29
UPF3BQ9BZI7 AC130360.2-201ENST00000533477 1556 ntBASIC6.96□□□□□ -1.29
UPF3BQ9BZI7 AC093225.1-201ENST00000506867 1408 ntBASIC6.96□□□□□ -1.3
UPF3BQ9BZI7 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
UPF3BQ9BZI7 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC6.96□□□□□ -1.3
UPF3BQ9BZI7 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC6.96□□□□□ -1.3
UPF3BQ9BZI7 PNKDP1-201ENST00000435914 430 ntBASIC6.96□□□□□ -1.3
UPF3BQ9BZI7 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC6.96□□□□□ -1.3
UPF3BQ9BZI7 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC6.96□□□□□ -1.3
UPF3BQ9BZI7 AC002075.1-201ENST00000457396 676 ntBASIC6.96□□□□□ -1.3
UPF3BQ9BZI7 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
UPF3BQ9BZI7 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC6.96□□□□□ -1.3
UPF3BQ9BZI7 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC6.96□□□□□ -1.3
UPF3BQ9BZI7 AC008638.1-201ENST00000506035 866 ntBASIC6.96□□□□□ -1.3
UPF3BQ9BZI7 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC6.96□□□□□ -1.3
UPF3BQ9BZI7 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC6.96□□□□□ -1.3
UPF3BQ9BZI7 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC6.96□□□□□ -1.3
UPF3BQ9BZI7 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
UPF3BQ9BZI7 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC6.96□□□□□ -1.3
UPF3BQ9BZI7 AC008507.3-201ENST00000585753 472 ntBASIC6.96□□□□□ -1.3
UPF3BQ9BZI7 AC100767.2-201ENST00000604840 693 ntBASIC6.96□□□□□ -1.3
UPF3BQ9BZI7 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC6.96□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms