Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 AC005632.1-201ENST00000550637 576 ntBASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 AC026111.1-201ENST00000551090 1195 ntBASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 AL110292.1-202ENST00000552303 568 ntTSL 4 BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 ACTN1-AS1-201ENST00000553944 484 ntTSL 3 BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 RPL21P5-201ENST00000554662 472 ntBASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 AL133371.3-201ENST00000556197 549 ntTSL 4 BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 AL390334.1-201ENST00000556395 450 ntBASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 AL359212.1-201ENST00000556608 614 ntBASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 HNRNPA1P71-201ENST00000559135 950 ntBASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 AC104041.1-201ENST00000560054 569 ntTSL 5 BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 AC073176.1-201ENST00000560700 534 ntTSL 4 BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 AC013489.1-201ENST00000561140 598 ntTSL 3 BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 LINC02178-201ENST00000566876 425 ntTSL 3 BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 AC090751.1-201ENST00000566966 267 ntBASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 AC025678.1-201ENST00000567861 338 ntBASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 AC040162.2-201ENST00000573092 157 ntBASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 AC026458.2-201ENST00000589323 531 ntTSL 5 BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 SLC14A1-214ENST00000589700 1022 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 AC018761.3-201ENST00000590065 388 ntTSL 5 BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 AC243960.3-201ENST00000599316 580 ntTSL 4 BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 SLC6A21P-201ENST00000599458 369 ntBASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 AL031429.2-201ENST00000602605 649 ntBASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 PHBP20-201ENST00000603694 818 ntBASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 AC091488.1-201ENST00000604239 660 ntBASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 RN7SL715P-201ENST00000606972 286 ntBASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 AC005291.2-201ENST00000609088 523 ntTSL 4 BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 Metazoa_SRP.98-201ENST00000610878 274 ntBASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 RN7SL82P-201ENST00000611435 237 ntBASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 AL731556.2-201ENST00000615610 770 ntBASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 RN7SL673P-201ENST00000616262 237 ntBASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 FAM197Y4-201ENST00000616275 467 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 AL356274.1-201ENST00000617064 410 ntBASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 AC009159.1-201ENST00000618386 642 ntBASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 AC010087.1-201ENST00000618630 438 ntBASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 RN7SL628P-201ENST00000619139 237 ntBASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 Metazoa_SRP.132-201ENST00000619251 285 ntBASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 FAM197Y5-203ENST00000619815 467 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 RN7SL719P-201ENST00000620196 237 ntBASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 AP000457.1-201ENST00000620221 378 ntBASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 RN7SL469P-201ENST00000621501 237 ntBASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 AP003108.5-201ENST00000623008 895 ntBASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 NPLOC4-221ENST00000625705 405 ntTSL 5 BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 VIPR1-AS1-229ENST00000628282 515 ntTSL 5 BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 TEX41-279ENST00000629149 609 ntTSL 5 BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 ATE1-AS1-202ENST00000636460 506 ntBASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 MYOCD-201ENST00000343344 2817 ntAPPRIS P3 TSL 1 (best) BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 SPATA31C2-201ENST00000324915 3777 ntBASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 AKR1C2-201ENST00000380753 3756 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 SIRPD-202ENST00000381623 1958 ntAPPRIS P2 TSL 1 (best) BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 RGS2-201ENST00000235382 1354 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 ZNF512-208ENST00000556601 3543 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 THOC1-201ENST00000261600 2087 ntAPPRIS P2 TSL 1 (best) BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 AC004672.1-201ENST00000513082 2088 ntTSL 5 BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 AL356361.1-201ENST00000400943 1459 ntBASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 MFSD8-207ENST00000513559 1813 ntTSL 2 BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 LRMP-205ENST00000548766 2193 ntAPPRIS P2 TSL 2 BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 TRIM6-201ENST00000278302 3217 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 NELL2-202ENST00000395487 3203 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 KIF18A-201ENST00000263181 3568 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 TP53BP1-202ENST00000382039 6015 ntTSL 5 BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 TFRC-203ENST00000420415 4814 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 162.1 ms