Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
VGLL1Q99990 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
VGLL1Q99990 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
VGLL1Q99990 AL133243.2-201ENST00000610331 1621 ntBASIC4.61□□□□□ -1.67
VGLL1Q99990 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
VGLL1Q99990 PARP4P2-201ENST00000446672 3326 ntBASIC4.61□□□□□ -1.67
VGLL1Q99990 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
VGLL1Q99990 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
VGLL1Q99990 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
VGLL1Q99990 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
VGLL1Q99990 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC4.6□□□□□ -1.67
VGLL1Q99990 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
VGLL1Q99990 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
VGLL1Q99990 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
VGLL1Q99990 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
VGLL1Q99990 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
VGLL1Q99990 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
VGLL1Q99990 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC4.6□□□□□ -1.67
VGLL1Q99990 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
VGLL1Q99990 RNA5SP375-201ENST00000362975 119 ntBASIC4.6□□□□□ -1.67
VGLL1Q99990 RNU1-49P-201ENST00000363468 159 ntBASIC4.6□□□□□ -1.67
VGLL1Q99990 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
VGLL1Q99990 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
VGLL1Q99990 SNORD94-201ENST00000386037 137 ntBASIC4.6□□□□□ -1.67
VGLL1Q99990 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC4.6□□□□□ -1.67
VGLL1Q99990 AC003045.1-201ENST00000398779 713 ntBASIC4.6□□□□□ -1.67
VGLL1Q99990 MIR1266-201ENST00000408125 84 ntBASIC4.6□□□□□ -1.67
VGLL1Q99990 SNORA77.2-201ENST00000408571 112 ntBASIC4.6□□□□□ -1.67
VGLL1Q99990 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC4.6□□□□□ -1.67
VGLL1Q99990 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC4.6□□□□□ -1.67
VGLL1Q99990 AL512504.1-201ENST00000415494 778 ntBASIC4.6□□□□□ -1.67
VGLL1Q99990 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC4.6□□□□□ -1.67
VGLL1Q99990 HNRNPA1P29-201ENST00000426409 879 ntBASIC4.6□□□□□ -1.67
VGLL1Q99990 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC4.6□□□□□ -1.67
VGLL1Q99990 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC4.6□□□□□ -1.67
VGLL1Q99990 PPIAP10-201ENST00000438675 458 ntBASIC4.6□□□□□ -1.67
VGLL1Q99990 EMC3-AS1-205ENST00000438698 534 ntBASIC4.6□□□□□ -1.67
VGLL1Q99990 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC4.6□□□□□ -1.67
VGLL1Q99990 AL691517.1-201ENST00000440833 1235 ntBASIC4.6□□□□□ -1.67
VGLL1Q99990 GAPDHP37-201ENST00000442317 968 ntBASIC4.6□□□□□ -1.67
VGLL1Q99990 COX4I1P2-201ENST00000447446 547 ntBASIC4.6□□□□□ -1.67
VGLL1Q99990 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC4.6□□□□□ -1.67
VGLL1Q99990 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC4.6□□□□□ -1.67
VGLL1Q99990 MTND6P32-201ENST00000457611 483 ntBASIC4.6□□□□□ -1.67
VGLL1Q99990 EIF2S2P4-201ENST00000461070 984 ntBASIC4.6□□□□□ -1.67
VGLL1Q99990 AP002371.1-201ENST00000463604 433 ntBASIC4.6□□□□□ -1.67
VGLL1Q99990 GM2AP2-201ENST00000491764 562 ntBASIC4.6□□□□□ -1.67
VGLL1Q99990 AC114324.2-202ENST00000503812 134 ntBASIC4.6□□□□□ -1.67
VGLL1Q99990 SNX18P24-201ENST00000505249 671 ntBASIC4.6□□□□□ -1.67
VGLL1Q99990 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC4.6□□□□□ -1.67
VGLL1Q99990 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
VGLL1Q99990 Y_RNA.710-201ENST00000516975 110 ntBASIC4.6□□□□□ -1.67
VGLL1Q99990 AP003102.1-201ENST00000525638 661 ntBASIC4.6□□□□□ -1.67
VGLL1Q99990 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC4.6□□□□□ -1.67
VGLL1Q99990 MALAT1-203ENST00000544868 480 ntTSL 3 BASIC4.6□□□□□ -1.67
VGLL1Q99990 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC4.6□□□□□ -1.67
VGLL1Q99990 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC4.6□□□□□ -1.67
VGLL1Q99990 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC4.6□□□□□ -1.67
VGLL1Q99990 AC018845.1-201ENST00000564193 744 ntTSL 2 BASIC4.6□□□□□ -1.67
VGLL1Q99990 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC4.6□□□□□ -1.67
VGLL1Q99990 AP001357.1-201ENST00000586304 1053 ntBASIC4.6□□□□□ -1.67
VGLL1Q99990 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC4.6□□□□□ -1.67
VGLL1Q99990 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
VGLL1Q99990 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC4.6□□□□□ -1.67
VGLL1Q99990 AC036176.3-201ENST00000602456 418 ntBASIC4.6□□□□□ -1.67
VGLL1Q99990 BNIP3P19-201ENST00000605397 577 ntBASIC4.6□□□□□ -1.67
VGLL1Q99990 AL591167.1-201ENST00000607321 456 ntBASIC4.6□□□□□ -1.67
VGLL1Q99990 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC4.6□□□□□ -1.67
VGLL1Q99990 CLUHP10-201ENST00000631979 980 ntBASIC4.6□□□□□ -1.67
VGLL1Q99990 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
VGLL1Q99990 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
VGLL1Q99990 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
VGLL1Q99990 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC4.6□□□□□ -1.67
VGLL1Q99990 AL136520.1-201ENST00000600311 1322 ntBASIC4.6□□□□□ -1.67
VGLL1Q99990 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
VGLL1Q99990 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
VGLL1Q99990 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
VGLL1Q99990 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC4.6□□□□□ -1.67
VGLL1Q99990 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
VGLL1Q99990 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC4.6□□□□□ -1.67
VGLL1Q99990 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
VGLL1Q99990 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
VGLL1Q99990 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC4.6□□□□□ -1.67
VGLL1Q99990 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
VGLL1Q99990 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
VGLL1Q99990 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC4.59□□□□□ -1.67
VGLL1Q99990 RMST-209ENST00000639542 3269 ntTSL 5 BASIC4.59□□□□□ -1.67
VGLL1Q99990 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
VGLL1Q99990 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC4.59□□□□□ -1.67
VGLL1Q99990 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
VGLL1Q99990 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
VGLL1Q99990 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
VGLL1Q99990 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
VGLL1Q99990 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC4.59□□□□□ -1.67
VGLL1Q99990 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
VGLL1Q99990 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
VGLL1Q99990 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC4.59□□□□□ -1.67
VGLL1Q99990 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC4.59□□□□□ -1.67
VGLL1Q99990 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
VGLL1Q99990 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms