Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
CDK5RAP3Q96JB5 AC092111.2-201ENST00000611627 1414 ntBASIC6.91□□□□□ -1.3
CDK5RAP3Q96JB5 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC6.91□□□□□ -1.3
CDK5RAP3Q96JB5 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC6.91□□□□□ -1.3
CDK5RAP3Q96JB5 AC011416.1-201ENST00000514947 1732 ntBASIC6.9□□□□□ -1.3
CDK5RAP3Q96JB5 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
CDK5RAP3Q96JB5 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC6.9□□□□□ -1.3
CDK5RAP3Q96JB5 TMCC1P1-201ENST00000518897 1980 ntBASIC6.9□□□□□ -1.3
CDK5RAP3Q96JB5 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.9□□□□□ -1.3
CDK5RAP3Q96JB5 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC6.9□□□□□ -1.3
CDK5RAP3Q96JB5 RNU6-697P-201ENST00000363348 107 ntBASIC6.9□□□□□ -1.3
CDK5RAP3Q96JB5 RN7SKP186-201ENST00000365371 303 ntBASIC6.9□□□□□ -1.3
CDK5RAP3Q96JB5 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC6.9□□□□□ -1.3
CDK5RAP3Q96JB5 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CDK5RAP3Q96JB5 RBBP4P5-201ENST00000398583 1266 ntBASIC6.9□□□□□ -1.3
CDK5RAP3Q96JB5 CDY17P-201ENST00000414121 1282 ntBASIC6.9□□□□□ -1.3
CDK5RAP3Q96JB5 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.9□□□□□ -1.3
CDK5RAP3Q96JB5 AC016027.5-201ENST00000427227 210 ntBASIC6.9□□□□□ -1.3
CDK5RAP3Q96JB5 CDY8P-201ENST00000428380 1279 ntBASIC6.9□□□□□ -1.3
CDK5RAP3Q96JB5 AC073508.1-201ENST00000428866 656 ntBASIC6.9□□□□□ -1.3
CDK5RAP3Q96JB5 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC6.9□□□□□ -1.3
CDK5RAP3Q96JB5 CDY20P-201ENST00000447528 1279 ntBASIC6.9□□□□□ -1.3
CDK5RAP3Q96JB5 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC6.9□□□□□ -1.3
CDK5RAP3Q96JB5 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC6.9□□□□□ -1.3
CDK5RAP3Q96JB5 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6.9□□□□□ -1.3
CDK5RAP3Q96JB5 HMGN1P15-201ENST00000513870 295 ntBASIC6.9□□□□□ -1.3
CDK5RAP3Q96JB5 MAST4-IT1-201ENST00000514241 658 ntBASIC6.9□□□□□ -1.3
CDK5RAP3Q96JB5 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC6.9□□□□□ -1.3
CDK5RAP3Q96JB5 SUMO2P19-201ENST00000518920 295 ntBASIC6.9□□□□□ -1.3
CDK5RAP3Q96JB5 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC6.9□□□□□ -1.3
CDK5RAP3Q96JB5 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC6.9□□□□□ -1.3
CDK5RAP3Q96JB5 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC6.9□□□□□ -1.3
CDK5RAP3Q96JB5 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
CDK5RAP3Q96JB5 OLR1-210ENST00000544577 924 ntTSL 5 BASIC6.9□□□□□ -1.3
CDK5RAP3Q96JB5 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
CDK5RAP3Q96JB5 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC6.9□□□□□ -1.3
CDK5RAP3Q96JB5 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
CDK5RAP3Q96JB5 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CDK5RAP3Q96JB5 RNU4ATAC-201ENST00000580972 127 ntBASIC6.9□□□□□ -1.3
CDK5RAP3Q96JB5 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC6.9□□□□□ -1.3
CDK5RAP3Q96JB5 AC027334.1-201ENST00000603257 310 ntBASIC6.9□□□□□ -1.3
CDK5RAP3Q96JB5 AC141002.1-201ENST00000607025 279 ntBASIC6.9□□□□□ -1.3
CDK5RAP3Q96JB5 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC6.9□□□□□ -1.3
CDK5RAP3Q96JB5 AC244100.4-201ENST00000617747 388 ntBASIC6.9□□□□□ -1.3
CDK5RAP3Q96JB5 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC6.9□□□□□ -1.3
CDK5RAP3Q96JB5 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC6.9□□□□□ -1.3
CDK5RAP3Q96JB5 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC6.9□□□□□ -1.31
CDK5RAP3Q96JB5 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.31
CDK5RAP3Q96JB5 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC6.9□□□□□ -1.31
CDK5RAP3Q96JB5 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC6.9□□□□□ -1.31
CDK5RAP3Q96JB5 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
CDK5RAP3Q96JB5 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
CDK5RAP3Q96JB5 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
CDK5RAP3Q96JB5 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
CDK5RAP3Q96JB5 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
CDK5RAP3Q96JB5 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC6.9□□□□□ -1.31
CDK5RAP3Q96JB5 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC6.9□□□□□ -1.31
CDK5RAP3Q96JB5 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CDK5RAP3Q96JB5 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
CDK5RAP3Q96JB5 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.89□□□□□ -1.31
CDK5RAP3Q96JB5 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
CDK5RAP3Q96JB5 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
CDK5RAP3Q96JB5 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CDK5RAP3Q96JB5 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CDK5RAP3Q96JB5 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
CDK5RAP3Q96JB5 AP000568.1-201ENST00000282964 442 ntBASIC6.89□□□□□ -1.31
CDK5RAP3Q96JB5 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CDK5RAP3Q96JB5 CRP-204ENST00000368112 787 ntTSL 2 BASIC6.89□□□□□ -1.31
CDK5RAP3Q96JB5 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC6.89□□□□□ -1.31
CDK5RAP3Q96JB5 AL356057.1-202ENST00000402263 756 ntBASIC6.89□□□□□ -1.31
CDK5RAP3Q96JB5 RNA5SP198-201ENST00000410376 127 ntBASIC6.89□□□□□ -1.31
CDK5RAP3Q96JB5 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC6.89□□□□□ -1.31
CDK5RAP3Q96JB5 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC6.89□□□□□ -1.31
CDK5RAP3Q96JB5 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC6.89□□□□□ -1.31
CDK5RAP3Q96JB5 AC108479.1-201ENST00000431142 427 ntBASIC6.89□□□□□ -1.31
CDK5RAP3Q96JB5 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CDK5RAP3Q96JB5 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC6.89□□□□□ -1.31
CDK5RAP3Q96JB5 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC6.89□□□□□ -1.31
CDK5RAP3Q96JB5 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC6.89□□□□□ -1.31
CDK5RAP3Q96JB5 AC092905.1-201ENST00000467527 949 ntBASIC6.89□□□□□ -1.31
CDK5RAP3Q96JB5 AC016550.1-201ENST00000505348 785 ntBASIC6.89□□□□□ -1.31
CDK5RAP3Q96JB5 AC112484.3-201ENST00000505910 329 ntBASIC6.89□□□□□ -1.31
CDK5RAP3Q96JB5 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC6.89□□□□□ -1.31
CDK5RAP3Q96JB5 HMGN1P17-201ENST00000513734 295 ntBASIC6.89□□□□□ -1.31
CDK5RAP3Q96JB5 AC027338.1-201ENST00000514840 825 ntBASIC6.89□□□□□ -1.31
CDK5RAP3Q96JB5 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC6.89□□□□□ -1.31
CDK5RAP3Q96JB5 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC6.89□□□□□ -1.31
CDK5RAP3Q96JB5 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC6.89□□□□□ -1.31
CDK5RAP3Q96JB5 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC6.89□□□□□ -1.31
CDK5RAP3Q96JB5 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC6.89□□□□□ -1.31
CDK5RAP3Q96JB5 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC6.89□□□□□ -1.31
CDK5RAP3Q96JB5 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC6.89□□□□□ -1.31
CDK5RAP3Q96JB5 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC6.89□□□□□ -1.31
CDK5RAP3Q96JB5 AC092681.3-201ENST00000609463 678 ntBASIC6.89□□□□□ -1.31
CDK5RAP3Q96JB5 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CDK5RAP3Q96JB5 RFPL4AP6-201ENST00000616792 846 ntBASIC6.89□□□□□ -1.31
CDK5RAP3Q96JB5 AC022306.3-201ENST00000619930 550 ntBASIC6.89□□□□□ -1.31
CDK5RAP3Q96JB5 AC022919.1-201ENST00000624979 626 ntBASIC6.89□□□□□ -1.31
CDK5RAP3Q96JB5 TEX41-293ENST00000630451 690 ntTSL 5 BASIC6.89□□□□□ -1.31
CDK5RAP3Q96JB5 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.89□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms