Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC6.82□□□□□ -1.32
HPS3Q969F9 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.82□□□□□ -1.32
HPS3Q969F9 AC011416.1-201ENST00000514947 1732 ntBASIC6.82□□□□□ -1.32
HPS3Q969F9 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC6.82□□□□□ -1.32
HPS3Q969F9 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.82□□□□□ -1.32
HPS3Q969F9 ERG-202ENST00000398897 4651 ntTSL 5 BASIC6.82□□□□□ -1.32
HPS3Q969F9 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC6.82□□□□□ -1.32
HPS3Q969F9 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
HPS3Q969F9 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
HPS3Q969F9 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC6.82□□□□□ -1.32
HPS3Q969F9 RN7SKP171-201ENST00000364417 303 ntBASIC6.82□□□□□ -1.32
HPS3Q969F9 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC6.82□□□□□ -1.32
HPS3Q969F9 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
HPS3Q969F9 AL356968.2-201ENST00000412769 1257 ntBASIC6.82□□□□□ -1.32
HPS3Q969F9 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
HPS3Q969F9 AC017078.1-201ENST00000416146 368 ntBASIC6.82□□□□□ -1.32
HPS3Q969F9 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
HPS3Q969F9 AL512593.1-201ENST00000444758 779 ntBASIC6.82□□□□□ -1.32
HPS3Q969F9 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC6.82□□□□□ -1.32
HPS3Q969F9 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
HPS3Q969F9 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC6.82□□□□□ -1.32
HPS3Q969F9 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC6.82□□□□□ -1.32
HPS3Q969F9 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC6.82□□□□□ -1.32
HPS3Q969F9 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC6.82□□□□□ -1.32
HPS3Q969F9 RPL12P30-201ENST00000488389 499 ntBASIC6.82□□□□□ -1.32
HPS3Q969F9 MTCO2P9-201ENST00000503214 694 ntBASIC6.82□□□□□ -1.32
HPS3Q969F9 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC6.82□□□□□ -1.32
HPS3Q969F9 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC6.82□□□□□ -1.32
HPS3Q969F9 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC6.82□□□□□ -1.32
HPS3Q969F9 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC6.82□□□□□ -1.32
HPS3Q969F9 SNX18P25-201ENST00000510539 758 ntBASIC6.82□□□□□ -1.32
HPS3Q969F9 RNU6-1102P-201ENST00000516149 96 ntBASIC6.82□□□□□ -1.32
HPS3Q969F9 RN7SKP157-201ENST00000516174 282 ntBASIC6.82□□□□□ -1.32
HPS3Q969F9 RNA5SP441-201ENST00000516809 88 ntBASIC6.82□□□□□ -1.32
HPS3Q969F9 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC6.82□□□□□ -1.32
HPS3Q969F9 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC6.82□□□□□ -1.32
HPS3Q969F9 HMGB1P46-201ENST00000520062 610 ntBASIC6.82□□□□□ -1.32
HPS3Q969F9 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC6.82□□□□□ -1.32
HPS3Q969F9 AP003033.2-201ENST00000528901 805 ntBASIC6.82□□□□□ -1.32
HPS3Q969F9 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC6.82□□□□□ -1.32
HPS3Q969F9 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC6.82□□□□□ -1.32
HPS3Q969F9 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC6.82□□□□□ -1.32
HPS3Q969F9 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC6.82□□□□□ -1.32
HPS3Q969F9 MT1CP-201ENST00000567054 174 ntBASIC6.82□□□□□ -1.32
HPS3Q969F9 AC233266.2-201ENST00000567067 528 ntBASIC6.82□□□□□ -1.32
HPS3Q969F9 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC6.82□□□□□ -1.32
HPS3Q969F9 AP005136.2-201ENST00000583253 1049 ntBASIC6.82□□□□□ -1.32
HPS3Q969F9 GLYATL1P2-202ENST00000588046 902 ntBASIC6.82□□□□□ -1.32
HPS3Q969F9 AC011500.1-201ENST00000601963 469 ntBASIC6.82□□□□□ -1.32
HPS3Q969F9 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC6.82□□□□□ -1.32
HPS3Q969F9 AL391834.2-201ENST00000609982 546 ntBASIC6.82□□□□□ -1.32
HPS3Q969F9 RN7SL261P-201ENST00000613441 282 ntBASIC6.82□□□□□ -1.32
HPS3Q969F9 AL133370.2-201ENST00000619934 439 ntBASIC6.82□□□□□ -1.32
HPS3Q969F9 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
HPS3Q969F9 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.82□□□□□ -1.32
HPS3Q969F9 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
HPS3Q969F9 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
HPS3Q969F9 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
HPS3Q969F9 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
HPS3Q969F9 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
HPS3Q969F9 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6.82□□□□□ -1.32
HPS3Q969F9 CA1-225ENST00000626824 2405 ntTSL 5 BASIC6.81□□□□□ -1.32
HPS3Q969F9 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
HPS3Q969F9 EEF1A1P30-201ENST00000429708 1315 ntBASIC6.81□□□□□ -1.32
HPS3Q969F9 NAMPTP1-201ENST00000440465 2514 ntBASIC6.81□□□□□ -1.32
HPS3Q969F9 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
HPS3Q969F9 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
HPS3Q969F9 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
HPS3Q969F9 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
HPS3Q969F9 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.81□□□□□ -1.32
HPS3Q969F9 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
HPS3Q969F9 MIR188-201ENST00000385034 86 ntBASIC6.81□□□□□ -1.32
HPS3Q969F9 VN1R12P-201ENST00000403778 876 ntBASIC6.81□□□□□ -1.32
HPS3Q969F9 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC6.81□□□□□ -1.32
HPS3Q969F9 MARK2P12-201ENST00000420129 585 ntBASIC6.81□□□□□ -1.32
HPS3Q969F9 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
HPS3Q969F9 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC6.81□□□□□ -1.32
HPS3Q969F9 PSMD10P2-201ENST00000432890 672 ntBASIC6.81□□□□□ -1.32
HPS3Q969F9 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC6.81□□□□□ -1.32
HPS3Q969F9 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC6.81□□□□□ -1.32
HPS3Q969F9 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC6.81□□□□□ -1.32
HPS3Q969F9 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
HPS3Q969F9 AL645936.1-201ENST00000441979 518 ntBASIC6.81□□□□□ -1.32
HPS3Q969F9 AC079922.1-201ENST00000443291 359 ntBASIC6.81□□□□□ -1.32
HPS3Q969F9 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC6.81□□□□□ -1.32
HPS3Q969F9 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC6.81□□□□□ -1.32
HPS3Q969F9 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC6.81□□□□□ -1.32
HPS3Q969F9 AC005017.1-201ENST00000482002 490 ntBASIC6.81□□□□□ -1.32
HPS3Q969F9 C1GALT1P2-201ENST00000510813 1104 ntBASIC6.81□□□□□ -1.32
HPS3Q969F9 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC6.81□□□□□ -1.32
HPS3Q969F9 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC6.81□□□□□ -1.32
HPS3Q969F9 SETP21-201ENST00000514799 892 ntBASIC6.81□□□□□ -1.32
HPS3Q969F9 AC067904.2-201ENST00000517322 1283 ntBASIC6.81□□□□□ -1.32
HPS3Q969F9 AC103833.1-201ENST00000517442 172 ntBASIC6.81□□□□□ -1.32
HPS3Q969F9 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC6.81□□□□□ -1.32
HPS3Q969F9 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC6.81□□□□□ -1.32
HPS3Q969F9 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC6.81□□□□□ -1.32
HPS3Q969F9 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
HPS3Q969F9 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC6.81□□□□□ -1.32
HPS3Q969F9 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC6.81□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms